File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/3e80f1b26bf0e094bc6ff05e48142c/.command.log
Size
710 bytes
Task
NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (1029_01F-T1-TDNA-1_B23VCL7LT4_1_vs_1029_01F-N1-BDNA-1_B23KFG5LT4_1)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/3e80f1b26bf0e094bc6ff05e48142c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/3e80f1b26bf0e094bc6ff05e48142c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/3a4a37412df1ab82d0f93acbfc7b35/1029_01F-T1-TDNA-1_B23VCL7LT4_1_vs_1029_01F-N1-BDNA-1_B23KFG5LT4_1.tnseq.filtered.vcf.gz
==> STAGING COMPLETE (4 inputs)

Lines   total/split/joined/realigned/mismatch_removed/dup_removed/skipped:	35911/6986/0/17593/0/0/0