File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/7ec4ff9c0cf37c05c747b5b946f929/.command.log
Size
891 bytes
Task
NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (1029_1H5-T1-TDNA-1_23K7YCLT4_1_vs_1029_1H5-N1-BDNA-1_235YY7LT3_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/7ec4ff9c0cf37c05c747b5b946f929/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/c7bbda79bd78771c7a706de72b3708/1029_1H5-T1-TDNA-1_23K7YCLT4_1_vs_1029_1H5-N1-BDNA-1_235YY7LT3_1.snv_indel.filtered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/7ec4ff9c0cf37c05c747b5b946f929/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/beds/altera_subpanels/hg38/xgen-exome-hyb-panel-v2-targets-hg38_short.mrg.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/c7bbda79bd78771c7a706de72b3708/1029_1H5-T1-TDNA-1_23K7YCLT4_1_vs_1029_1H5-N1-BDNA-1_235YY7LT3_1.snv_indel.filtered.vcf.gz.tbi
==> STAGING COMPLETE (5 inputs)

TMB region size: 34149606 bp (34.15 MB)
Total: 30862, In BED: 9580, PASS: 118, TMB_VARIANT: 45, Score: 1.3177