File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/e59fffd161b3988ef6fc42841e0b46/.command.log
Size
709 bytes
Task
NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (1029_0DT-T1-TDNA-1_A23TNLVLT4_1_vs_1029_0DT-N1-BDNA-1_235YY7LT3_1)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/e59fffd161b3988ef6fc42841e0b46/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/e59fffd161b3988ef6fc42841e0b46/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/b0db4ea8e6a6f8d8a83296c822ce11/1029_0DT-T1-TDNA-1_A23TNLVLT4_1_vs_1029_0DT-N1-BDNA-1_235YY7LT3_1.tnseq.filtered.vcf.gz
==> STAGING COMPLETE (4 inputs)

Lines   total/split/joined/realigned/mismatch_removed/dup_removed/skipped:	33360/6088/0/14795/0/0/0