NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (1029_5O3-N1-BDNA-1_2375WFLT3_s15) - sarek-optitype-runtime-comparison-8a99ba01-resume2 - Workflow Tracker

Runs
sarek-optity..a01-resume2
Tasks
OPTITYPE (1029_5O3-N1-BDNA-1_2375WFLT3_s15)

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Task Info

Status: succeeded
Hash: 3ee2b9409eac
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE
Tag: 1029_5O3-N1-BDNA-1_2375WFLT3_s15
Attempts: 2

Attempt 2

Execution

Status: succeeded - cached
Hash: 67/f45cbc
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/67/f45cbc195dca4b303ae05d8722cbfd
Native ID: nf-67f45cbc195dca4b303ae05d8722cbfd-626a1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 8.5 GB / 64.0 GB
Process I/O (rchar / wchar): 623.2 MB / 32.4 MB
Disk I/O (read / write): - / 32.5 MB
Host: i-0242ac28d7e19dcfd ( on-demand)

Runtime

Submitted: Feb 06, 2026 12:37:51 PM
Completed: Feb 06, 2026 1:09:32 PM
Total Duration: 31m 40s

Phases

Queue: 1m 9s
Execution: 30m 28s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 7d/f62dd7
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/f62dd76c6b04b0619bbe969ed0f2d7
Native ID: nf-7df62dd76c6b04b0619bbe969ed0f2d7-37d54

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 3.7 GB / 64.0 GB
Process I/O (rchar / wchar): 594.1 MB / 8.7 MB
Disk I/O (read / write): - / 8.8 MB
Host: i-0ae3f40634f097075 ( on-demand)

Runtime

Submitted: Feb 06, 2026 12:36:56 PM
Completed: Feb 06, 2026 12:50:26 PM
Total Duration: 13m 29s

Phases

Queue: 1m 7s
Execution: 12m 17s
Stage/Unstage: 4s