NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (1029_2LI-N1-BDNA-1_2375WFLT3_s08) - sarek-optitype-runtime-comparison-8a99ba01-resume2 - Workflow Tracker

Runs
sarek-optity..a01-resume2
Tasks
OPTITYPE (1029_2LI-N1-BDNA-1_2375WFLT3_s08)

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Task Info

Status: aborted
Hash: 925aac78d844
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE
Tag: 1029_2LI-N1-BDNA-1_2375WFLT3_s08
Attempts: 5

Attempt 5

Execution

Status: aborted
Hash: 4d/5f3ba6
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/5f3ba673d31c0b724197ecb4ebf978
Native ID: nf-4d5f3ba673d31c0b724197ecb4ebf978-f73a8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 12
Memory (peak / alloc): - / 192.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-03814d1a5dd004cd1 ( on-demand)

Runtime

Submitted: Feb 10, 2026 3:18:03 PM
Completed: Feb 12, 2026 11:57:14 AM
Total Duration: -

Phases

Queue: 59s
Execution: -
Stage/Unstage: -

Attempt 4

Execution

Status: failed
Hash: 28/82b9a1
Exit Code: 143
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/82b9a15e2f32fa8fb63842dac0ca1e
Native ID: nf-2882b9a15e2f32fa8fb63842dac0ca1e-579ea

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 8
Memory (peak / alloc): - / 128.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-03814d1a5dd004cd1 ( on-demand)

Runtime

Submitted: Feb 08, 2026 3:17:02 PM
Completed: Feb 10, 2026 3:17:03 PM
Total Duration: 48h 0m

Phases

Queue: 2s
Execution: 47h 59m
Stage/Unstage: 0s

Attempt 3

Execution

Status: succeeded - cached
Hash: 50/3710bb
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/3710bbd44414087569ff49c53b8d57
Native ID: nf-503710bbd44414087569ff49c53b8d57-2d09c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 5.9 GB / 64.0 GB
Process I/O (rchar / wchar): 598.9 MB / 22.7 MB
Disk I/O (read / write): - / 22.8 MB
Host: i-0aed02f0f814ebcc5 ( on-demand)

Runtime

Submitted: Feb 06, 2026 12:36:53 PM
Completed: Feb 06, 2026 12:58:24 PM
Total Duration: 21m 30s

Phases

Queue: 1m 10s
Execution: 20m 16s
Stage/Unstage: 3s

Attempt 2

Execution

Status: failed
Hash: 3f/939405
Exit Code: 143
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3f/939405ab57e9f8d6746398a637419b
Native ID: nf-3f939405ab57e9f8d6746398a637419b-4ca99

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 64.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-03814d1a5dd004cd1 ( on-demand)

Runtime

Submitted: Feb 06, 2026 3:16:07 PM
Completed: Feb 08, 2026 3:16:56 PM
Total Duration: 48h 0m

Phases

Queue: 1m 1s
Execution: 47h 59m
Stage/Unstage: 0s

Attempt 1

Execution

Status: succeeded
Hash: 22/7d62f6
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/7d62f6cb4977be2d77dfa07ca1d69c
Native ID: nf-227d62f6cb4977be2d77dfa07ca1d69c-14609

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 11.1 GB / 64.0 GB
Process I/O (rchar / wchar): 671.2 MB / 57.4 MB
Disk I/O (read / write): - / 57.5 MB
Host: i-0242ac28d7e19dcfd ( on-demand)

Runtime

Submitted: Feb 06, 2026 12:37:50 PM
Completed: Feb 06, 2026 1:18:42 PM
Total Duration: 40m 51s

Phases

Queue: 1m 10s
Execution: 39m 36s
Stage/Unstage: 4s