NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:HLA_CONVERT_OPTITYPE (1029_BF2U-N1-BDNA-1_2375WFLT3_s27) - sarek-optitype-runtime-comparison-8a99ba01-resume2 - Workflow Tracker

Runs
sarek-optity..a01-resume2
Tasks
HLA_CONVERT_OPTITYPE (1029_BF2U-N1-BDNA-1_2375WFLT3_s27)

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Task Info

Status: succeeded
Hash: cc61357b01a5
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:HLA_CONVERT_OPTITYPE
Tag: 1029_BF2U-N1-BDNA-1_2375WFLT3_s27
Attempts: 3

Attempt 3

Execution

Status: succeeded - cached
Hash: b7/73ffd8
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/73ffd8d3406242c84b608561adcb05
Native ID: nf-b773ffd8d3406242c84b608561adcb05-59949

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 4
Memory (peak / alloc): 14.1 MB / 32.0 GB
Process I/O (rchar / wchar): 1009.3 KB / 2.1 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0242ac28d7e19dcfd ( on-demand)

Runtime

Submitted: Feb 06, 2026 1:56:50 PM
Completed: Feb 06, 2026 1:56:55 PM
Total Duration: 4s

Phases

Queue: 2s
Execution: 0s
Stage/Unstage: 1s

Attempt 2

Execution

Status: succeeded - cached
Hash: dc/4df306
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dc/4df3066c4ff6a0cf3904dd82352d92
Native ID: nf-dc4df3066c4ff6a0cf3904dd82352d92-8edd9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 4
Memory (peak / alloc): 14.3 MB / 32.0 GB
Process I/O (rchar / wchar): 1009.3 KB / 2.1 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0242ac28d7e19dcfd ( on-demand)

Runtime

Submitted: Feb 06, 2026 1:50:50 PM
Completed: Feb 06, 2026 1:50:55 PM
Total Duration: 4s

Phases

Queue: 3s
Execution: 0s
Stage/Unstage: 0s

Attempt 1

Execution

Status: succeeded
Hash: 27/06c23f
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/06c23fe7c156cfbb03daa77338ac3c
Native ID: nf-2706c23fe7c156cfbb03daa77338ac3c-a4011

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 4
Memory (peak / alloc): 13.8 MB / 32.0 GB
Process I/O (rchar / wchar): 1006.4 KB / 2.1 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0aed02f0f814ebcc5 ( on-demand)

Runtime

Submitted: Feb 06, 2026 1:08:50 PM
Completed: Feb 06, 2026 1:08:56 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: 0s
Stage/Unstage: 1s