NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (custom_Sig_18_tumor_normal) - sarek-regression-somacnv-v3 - Workflow Tracker

Runs
sarek-regres..-somacnv-v3
Tasks
SOMA_CNV_CALL (custom_Sig_18_tumor_normal)

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Task Info

Status: failed
Hash: 0df8835bd76b
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL
Tag: custom_Sig_18_tumor_normal
Attempts: 4

Attempt 4

Execution

Status: failed
Hash: dd/879803
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-9c39aac
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/87980384faeef2bfbac3966189a161
Native ID: nf-dd87980384faeef2bfbac3966189a161-2cf79

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 128.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-043b7e1c5111c73cf ( on-demand)

Runtime

Submitted: Jun 04, 2026 9:51:52 AM
Completed: Jun 04, 2026 9:52:17 AM
Total Duration: 24s

Phases

Queue: 2s
Execution: 22s
Stage/Unstage: 0s

Attempt 3

Execution

Status: failed
Hash: 0d/bfae0c
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-9c39aac
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/bfae0c835ca5409f5f1aafa94eb1bc
Native ID: nf-0dbfae0c835ca5409f5f1aafa94eb1bc-05061

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 96.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-07189651bb4cf028a ( on-demand)

Runtime

Submitted: Jun 04, 2026 9:50:52 AM
Completed: Jun 04, 2026 9:51:24 AM
Total Duration: 31s

Phases

Queue: 8s
Execution: 23s
Stage/Unstage: 0s

Attempt 2

Execution

Status: failed
Hash: ab/161d88
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-9c39aac
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/161d88b7e4dd2d1c7c740d8c6059a2
Native ID: nf-ab161d88b7e4dd2d1c7c740d8c6059a2-a31a9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 64.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-055bb56ccfbdc3390 ( on-demand)

Runtime

Submitted: Jun 04, 2026 9:49:52 AM
Completed: Jun 04, 2026 9:50:20 AM
Total Duration: 27s

Phases

Queue: 2s
Execution: 25s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: a4/babb48
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-9c39aac
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/babb483dfafdd9cd77f1f0bcfd74c0
Native ID: nf-a4babb483dfafdd9cd77f1f0bcfd74c0-fac9b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 32.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0ddb57509325b3553 ( spot)

Runtime

Submitted: Jun 04, 2026 9:48:53 AM
Completed: Jun 04, 2026 9:49:21 AM
Total Duration: 27s

Phases

Queue: 7s
Execution: 20s
Stage/Unstage: 0s