[W::hts_idx_load3] The index file is older than the data file: Sig_18_Blood.recal.bam.bai
[W::hts_idx_load3] The index file is older than the data file: Sig_18_Blood.recal.bam.bai
Loaded 735874 sites across 3366 contigs
Reads: 0 total, 0 skipped (flags/unmapped), 0 no site overlap
Fragments: 0 total (0 paired, 0 singletons, 0 discordant, 0 orphans)
Sites: 735874 total, 0 with data, 0 output (depth>=10)
Loaded 735874 sites across 3366 contigs
Reads: 1685487 total, 159 skipped (flags/unmapped), 100896 no site overlap
Fragments: 922574 total (661858 paired, 13 singletons, 0 discordant, 260703 orphans)
Sites: 735874 total, 37775 with data, 36345 output (depth>=10)