NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (HCC1395_tumor_vs_HCC1395_BL) - sarek-regression-somacnv-v3 - Workflow Tracker

Runs
sarek-regres..-somacnv-v3
Tasks
SOMA_CNV_CALL (HCC1395_tumor_vs_HCC1395_BL)

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Task Info

Status: failed
Hash: 7779f38c401a
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL
Tag: HCC1395_tumor_vs_HCC1395_BL
Attempts: 4

Attempt 4

Execution

Status: failed
Hash: 55/ca6dbf
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-9c39aac
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/ca6dbf3ae408b8e3f056a80c5747a2
Native ID: nf-55ca6dbf3ae408b8e3f056a80c5747a2-89475

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 128.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-07189651bb4cf028a ( on-demand)

Runtime

Submitted: Jun 04, 2026 9:51:53 AM
Completed: Jun 04, 2026 9:52:11 AM
Total Duration: 17s

Phases

Queue: 1s
Execution: 16s
Stage/Unstage: 0s

Attempt 3

Execution

Status: failed
Hash: 24/0e0419
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-9c39aac
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/0e04192a7d4165c608d0dc045d28b4
Native ID: nf-240e04192a7d4165c608d0dc045d28b4-541db

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 96.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-043b7e1c5111c73cf ( on-demand)

Runtime

Submitted: Jun 04, 2026 9:50:52 AM
Completed: Jun 04, 2026 9:51:17 AM
Total Duration: 24s

Phases

Queue: 8s
Execution: 16s
Stage/Unstage: 0s

Attempt 2

Execution

Status: failed
Hash: 45/7213f2
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-9c39aac
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/7213f28a51bce7581c5faddbae541d
Native ID: nf-457213f28a51bce7581c5faddbae541d-1125e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 64.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-055bb56ccfbdc3390 ( on-demand)

Runtime

Submitted: Jun 04, 2026 9:49:53 AM
Completed: Jun 04, 2026 9:50:13 AM
Total Duration: 19s

Phases

Queue: 1s
Execution: 18s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: 4d/04f740
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-9c39aac
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/04f74023f1917b17246832834a2d36
Native ID: nf-4d04f74023f1917b17246832834a2d36-3dac4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 32.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-054c040f098067219 ( spot)

Runtime

Submitted: Jun 04, 2026 9:48:53 AM
Completed: Jun 04, 2026 9:49:16 AM
Total Duration: 22s

Phases

Queue: 7s
Execution: 15s
Stage/Unstage: 0s