NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (custom_Sig_18_tumor_normal) - sarek-regression-somacnv-v4 - Workflow Tracker

Runs
sarek-regres..-somacnv-v4
Tasks
SOMA_CNV_CALL (custom_Sig_18_tumor_normal)

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Task Info

Status: failed
Hash: 3a6c27f0bfef
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL
Tag: custom_Sig_18_tumor_normal
Attempts: 4

Attempt 4

Execution

Status: failed
Hash: 51/7f0689
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-fbf83cd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/51/7f0689c142270b2ddd08b6a74f81ce
Native ID: nf-517f0689c142270b2ddd08b6a74f81ce-277db

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 128.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-065e0433ad8b23a5c ( on-demand)

Runtime

Submitted: Jun 04, 2026 10:02:35 AM
Completed: Jun 04, 2026 10:02:59 AM
Total Duration: 23s

Phases

Queue: 1s
Execution: 22s
Stage/Unstage: 0s

Attempt 3

Execution

Status: failed
Hash: e3/7ceb0b
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-fbf83cd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/7ceb0b317b2f2fbf679c19861a1112
Native ID: nf-e37ceb0b317b2f2fbf679c19861a1112-a9aa4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 96.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-065e0433ad8b23a5c ( on-demand)

Runtime

Submitted: Jun 04, 2026 10:01:35 AM
Completed: Jun 04, 2026 10:02:00 AM
Total Duration: 24s

Phases

Queue: 1s
Execution: 23s
Stage/Unstage: 0s

Attempt 2

Execution

Status: failed
Hash: 82/619100
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-fbf83cd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/619100c386884f413c59e30b295813
Native ID: nf-82619100c386884f413c59e30b295813-7de2f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 64.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0870d129927bf9d81 ( on-demand)

Runtime

Submitted: Jun 04, 2026 10:00:35 AM
Completed: Jun 04, 2026 10:01:07 AM
Total Duration: 31s

Phases

Queue: 8s
Execution: 23s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: cb/fafe2c
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-fbf83cd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cb/fafe2c991833d95b78ba09dc3dd0ea
Native ID: nf-cbfafe2c991833d95b78ba09dc3dd0ea-90a4f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 32.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-010392a3e0db9b7a5 ( spot)

Runtime

Submitted: Jun 04, 2026 9:59:35 AM
Completed: Jun 04, 2026 10:00:17 AM
Total Duration: 41s

Phases

Queue: 12s
Execution: 29s
Stage/Unstage: 0s