NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (HCC1395_tumor_vs_HCC1395_BL) - sarek-regression-somacnv-v4 - Workflow Tracker

Runs
sarek-regres..-somacnv-v4
Tasks
SOMA_CNV_CALL (HCC1395_tumor_vs_HCC1395_BL)

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Task Info

Status: failed
Hash: 7fb86e76418a
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL
Tag: HCC1395_tumor_vs_HCC1395_BL
Attempts: 4

Attempt 4

Execution

Status: failed
Hash: 1a/c128e1
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-fbf83cd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/c128e14e0ee2458b7a1449fc3a3406
Native ID: nf-1ac128e14e0ee2458b7a1449fc3a3406-a178e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 128.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0870d129927bf9d81 ( on-demand)

Runtime

Submitted: Jun 04, 2026 10:02:34 AM
Completed: Jun 04, 2026 10:02:53 AM
Total Duration: 18s

Phases

Queue: 2s
Execution: 16s
Stage/Unstage: 0s

Attempt 3

Execution

Status: failed
Hash: 56/82f31f
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-fbf83cd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/82f31f85831e045ed277b335c9793a
Native ID: nf-5682f31f85831e045ed277b335c9793a-82d00

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 96.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0870d129927bf9d81 ( on-demand)

Runtime

Submitted: Jun 04, 2026 10:01:34 AM
Completed: Jun 04, 2026 10:01:53 AM
Total Duration: 18s

Phases

Queue: 2s
Execution: 16s
Stage/Unstage: 0s

Attempt 2

Execution

Status: failed
Hash: b4/bc208e
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-fbf83cd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/bc208e2c6443a92c61c606b3c57d67
Native ID: nf-b4bc208e2c6443a92c61c606b3c57d67-33ec5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 64.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-065e0433ad8b23a5c ( on-demand)

Runtime

Submitted: Jun 04, 2026 10:00:34 AM
Completed: Jun 04, 2026 10:00:59 AM
Total Duration: 24s

Phases

Queue: 8s
Execution: 16s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: 14/9134bf
Failure Reason: Error
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/soma-cnv:20260604-fbf83cd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/9134bf76f5b01069d19766cdb737b3
Native ID: nf-149134bf76f5b01069d19766cdb737b3-f7466

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 32.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0b4d5e3cda7b2d427 ( spot)

Runtime

Submitted: Jun 04, 2026 9:59:35 AM
Completed: Jun 04, 2026 9:59:58 AM
Total Duration: 22s

Phases

Queue: 7s
Execution: 15s
Stage/Unstage: 0s