File Info
- Filename
- HCC1395_tumor_vs_HCC1395_BL_metrics.tsv
- Full Path
- s3://ai-pipelines-experiment/chnobles/nf_sarek_regression_somacnv_v5/results/variant_calling/somatic_cnv/HCC1395_tumor_vs_HCC1395_BL/metrics/HCC1395_tumor_vs_HCC1395_BL_metrics.tsv
- Size
- 636 bytes
- Workflow Run
- sarek-regression-somacnv-v5
- Published
- Jun 04, 2026 10:08 AM
Content
View in new tab| specimen_id | n_clones | clonal_gini | purity | sum_rho | dipLogR | ploidy_obs | ploidy_fit | n_peaks | var_lr | var_lor | ellipse_pct_genome | aberrant_pct_genome | final_cost | converged | n_iter | n_segments | n_outlier_segments | median_z_score | icl_selected | icl_delta | somatic_mad | somatic_mapd | genotype | tumor_norm1_mad | tumor_norm1_mapd | tumor_norm2_mad | tumor_norm2_mapd | normal_norm1_mad | normal_norm1_mapd | normal_norm2_mad | normal_norm2_mapd | sample_type |
| HCC1395_tumor_vs_HCC1395_BL | 1 | 0.0 | 0.0749 | 0.0749 | 0.03 | 1.959 | 1.996 | 1 | 0.05883 | 0.05654 | 0.0 | 100.0 | 0.00108 | True | 2 | 6 | 4 | 12.12 | -37.269 | 0.18514 | 0.11275 | unknown | 0.59109 | 0.18738 | 0.16708 | 0.1068 | 0.56065 | 0.2 | 0.09581 | 0.07191 | somatic |
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