succeeded NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet) 7s 5s 0s 1s 0 bytes 171% 74.0 KB 2.4 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation) 17s 15s 0s 1s 14.4 MB 102% 2.0 MB 1006 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (HCC1395_BL) 11s 8s 0s 2s 20.8 MB 204% 131.5 MB 12.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (HCC1395_tumor) 8s 2s 1s 4s 104.4 MB 205% 287.7 MB 13.1 MB 0 bytes 3.6 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (Sig_18_Blood) 11s 7s 0s 3s 21.3 MB 202% 157.6 MB 12.6 MB 0 bytes 3.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (Sig_18_tissue) 22s 12s 6s 3s 195.2 MB 174% 558.7 MB 13.2 MB 0 bytes 3.6 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (custom_Sig_18_tumor_normal) 21s 1s 17s 2s 6.6 GB 676% 161.0 MB 1.8 MB 0 bytes 1.8 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (HCC1395_tumor_vs_HCC1395_BL) 17s 1s 13s 2s 6.6 GB 645% 154.9 MB 1.7 MB 0 bytes 1.8 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_EXPORT_VIEWER (custom_Sig_18_tumor_normal) 4s 1s 1s 1s 202.5 MB 945% 44.2 MB 86.6 KB 0 bytes 100.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_EXPORT_VIEWER (HCC1395_tumor_vs_HCC1395_BL) 4s 1s 1s 1s 202.3 MB 1016% 44.2 MB 84.0 KB 0 bytes 96.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (HCC1395_BL) 4s 1s 1s 1s 188.8 MB 1905% 60.7 MB 197.6 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (HCC1395_tumor) 8s 3s 3s 1s 245.1 MB 1871% 60.3 MB 204.6 KB 0 bytes 212.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_Blood) 5s 1s 1s 2s 195.0 MB 1865% 60.7 MB 197.6 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_tissue) 4s 1s 1s 1s 207.5 MB 2209% 61.0 MB 207.4 KB 0 bytes 216.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (HCC1395_BL) 10s 7s 0s 2s 10.4 MB 102% 109.8 MB 2.1 MB 0 bytes 640.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (HCC1395_tumor) 12s 7s 1s 3s 25.8 MB 102% 265.3 MB 2.2 MB 0 bytes 656.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_Blood) 5s 2s 0s 2s 9.8 MB 102% 135.5 MB 2.2 MB 0 bytes 648.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_tissue) 14s 7s 3s 3s 53.1 MB 101% 536.2 MB 2.2 MB 0 bytes 652.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (HCC1395_BL) 12s 2s 1s 9s 35.6 MB 185% 107.0 MB 3.4 MB 0 bytes 3.5 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (HCC1395_tumor) 13s 2s 2s 9s 213.1 MB 227% 262.4 MB 4.9 MB 0 bytes 4.9 MB 1
29 items found |