{
"report_multiqc_command": "/opt/conda/bin/multiqc --force --config multiqc_config.yml .",
"report_data_sources": {
"Samtools Flagstat": {
"stats": {
"HCC1395_BL": "/tmp/nxf.6RJhfc3liy/11/HCC1395_BL.stats",
"HCC1395_tumor": "/tmp/nxf.6RJhfc3liy/5/HCC1395_tumor.stats",
"Sig_18_Blood": "/tmp/nxf.6RJhfc3liy/6/Sig_18_Blood.stats",
"Sig_18_tissue": "/tmp/nxf.6RJhfc3liy/4/Sig_18_tissue.stats"
}
},
"Mosdepth": {
"genome_results": {
"HCC1395_BL": "/tmp/nxf.6RJhfc3liy/7/HCC1395_BL.mosdepth.region.dist.txt",
"HCC1395_tumor": "/tmp/nxf.6RJhfc3liy/14/HCC1395_tumor.mosdepth.region.dist.txt",
"Sig_18_Blood": "/tmp/nxf.6RJhfc3liy/9/Sig_18_Blood.mosdepth.region.dist.txt",
"Sig_18_tissue": "/tmp/nxf.6RJhfc3liy/12/Sig_18_tissue.mosdepth.region.dist.txt"
}
}
},
"report_general_stats_data": {
"samtools": {
"HCC1395_BL": {
"raw_total_sequences": 1322757.0,
"filtered_sequences": 0.0,
"sequences": 1322757.0,
"is_sorted": 1.0,
"1st_fragments": 659062.0,
"last_fragments": 663695.0,
"reads_mapped": 1322751.0,
"reads_mapped_and_paired": 1322741.0,
"reads_unmapped": 6.0,
"reads_properly_paired": 1322359.0,
"reads_paired": 1322757.0,
"reads_duplicated": 290924.0,
"reads_MQ0": 104606.0,
"reads_QC_failed": 0.0,
"non-primary_alignments": 0.0,
"supplementary_alignments": 172.0,
"total_length": 198413550.0,
"total_first_fragment_length": 98859300.0,
"total_last_fragment_length": 99554250.0,
"bases_mapped": 198412650.0,
"bases_mapped_(cigar)": 189673024.0,
"bases_trimmed": 0.0,
"bases_duplicated": 43638600.0,
"mismatches": 676687.0,
"error_rate": 0.00356765,
"average_length": 150.0,
"average_first_fragment_length": 150.0,
"average_last_fragment_length": 150.0,
"maximum_length": 150.0,
"maximum_first_fragment_length": 150.0,
"maximum_last_fragment_length": 150.0,
"average_quality": 35.9,
"insert_size_average": 283.6,
"insert_size_standard_deviation": 139.7,
"inward_oriented_pairs": 586702.0,
"outward_oriented_pairs": 74267.0,
"pairs_with_other_orientation": 165.0,
"pairs_on_different_chromosomes": 0.0,
"percentage_of_properly_paired_reads_(%)": 100.0,
"reads_mapped_percent": 99.99954640194684,
"reads_mapped_and_paired_percent": 99.99879040519158,
"reads_unmapped_percent": 0.00045359805315715586,
"reads_properly_paired_percent": 99.96991132914057,
"reads_paired_percent": 100.0,
"reads_duplicated_percent": 21.993760002782068,
"reads_MQ0_percent": 7.908179658092908,
"reads_QC_failed_percent": 0.0
},
"HCC1395_tumor": {
"raw_total_sequences": 3617929.0,
"filtered_sequences": 0.0,
"sequences": 3617929.0,
"is_sorted": 1.0,
"1st_fragments": 1806639.0,
"last_fragments": 1811290.0,
"reads_mapped": 3617921.0,
"reads_mapped_and_paired": 3617902.0,
"reads_unmapped": 8.0,
"reads_properly_paired": 3616700.0,
"reads_paired": 3617929.0,
"reads_duplicated": 1525894.0,
"reads_MQ0": 279782.0,
"reads_QC_failed": 0.0,
"non-primary_alignments": 0.0,
"supplementary_alignments": 757.0,
"total_length": 542689350.0,
"total_first_fragment_length": 270995850.0,
"total_last_fragment_length": 271693500.0,
"bases_mapped": 542688150.0,
"bases_mapped_(cigar)": 516961994.0,
"bases_trimmed": 0.0,
"bases_duplicated": 228884100.0,
"mismatches": 1871418.0,
"error_rate": 0.00362003,
"average_length": 150.0,
"average_first_fragment_length": 150.0,
"average_last_fragment_length": 150.0,
"maximum_length": 150.0,
"maximum_first_fragment_length": 150.0,
"maximum_last_fragment_length": 150.0,
"average_quality": 36.0,
"insert_size_average": 273.5,
"insert_size_standard_deviation": 134.8,
"inward_oriented_pairs": 1593119.0,
"outward_oriented_pairs": 215049.0,
"pairs_with_other_orientation": 511.0,
"pairs_on_different_chromosomes": 3.0,
"percentage_of_properly_paired_reads_(%)": 100.0,
"reads_mapped_percent": 99.99977887902168,
"reads_mapped_and_paired_percent": 99.99925371669815,
"reads_unmapped_percent": 0.00022112097832765651,
"reads_properly_paired_percent": 99.9660302897044,
"reads_paired_percent": 100.0,
"reads_duplicated_percent": 42.17589676303764,
"reads_MQ0_percent": 7.73320869480855,
"reads_QC_failed_percent": 0.0
},
"Sig_18_Blood": {
"raw_total_sequences": 1685332.0,
"filtered_sequences": 0.0,
"sequences": 1685332.0,
"is_sorted": 1.0,
"1st_fragments": 841709.0,
"last_fragments": 843623.0,
"reads_mapped": 1685328.0,
"reads_mapped_and_paired": 1685315.0,
"reads_unmapped": 4.0,
"reads_properly_paired": 1684980.0,
"reads_paired": 1685332.0,
"reads_duplicated": 258756.0,
"reads_MQ0": 125468.0,
"reads_QC_failed": 0.0,
"non-primary_alignments": 0.0,
"supplementary_alignments": 155.0,
"total_length": 252799800.0,
"total_first_fragment_length": 126256350.0,
"total_last_fragment_length": 126543450.0,
"bases_mapped": 252799200.0,
"bases_mapped_(cigar)": 242866722.0,
"bases_trimmed": 0.0,
"bases_duplicated": 38813400.0,
"mismatches": 914990.0,
"error_rate": 0.003767457,
"average_length": 150.0,
"average_first_fragment_length": 150.0,
"average_last_fragment_length": 150.0,
"maximum_length": 150.0,
"maximum_first_fragment_length": 150.0,
"maximum_last_fragment_length": 150.0,
"average_quality": 36.1,
"insert_size_average": 291.0,
"insert_size_standard_deviation": 142.5,
"inward_oriented_pairs": 756292.0,
"outward_oriented_pairs": 85991.0,
"pairs_with_other_orientation": 150.0,
"pairs_on_different_chromosomes": 2.0,
"percentage_of_properly_paired_reads_(%)": 100.0,
"reads_mapped_percent": 99.99976265804008,
"reads_mapped_and_paired_percent": 99.99899129667033,
"reads_unmapped_percent": 0.00023734195992243664,
"reads_properly_paired_percent": 99.97911390752682,
"reads_paired_percent": 100.0,
"reads_duplicated_percent": 15.353414045422504,
"reads_MQ0_percent": 7.44470525688707,
"reads_QC_failed_percent": 0.0
},
"Sig_18_tissue": {
"raw_total_sequences": 9108467.0,
"filtered_sequences": 0.0,
"sequences": 9108467.0,
"is_sorted": 1.0,
"1st_fragments": 4548023.0,
"last_fragments": 4560444.0,
"reads_mapped": 9108433.0,
"reads_mapped_and_paired": 9108388.0,
"reads_unmapped": 34.0,
"reads_properly_paired": 9104471.0,
"reads_paired": 9108467.0,
"reads_duplicated": 3112907.0,
"reads_MQ0": 624566.0,
"reads_QC_failed": 0.0,
"non-primary_alignments": 0.0,
"supplementary_alignments": 1482.0,
"total_length": 1366270050.0,
"total_first_fragment_length": 682203450.0,
"total_last_fragment_length": 684066600.0,
"bases_mapped": 1366264950.0,
"bases_mapped_(cigar)": 1280357724.0,
"bases_trimmed": 0.0,
"bases_duplicated": 466936050.0,
"mismatches": 4588671.0,
"error_rate": 0.003583898,
"average_length": 150.0,
"average_first_fragment_length": 150.0,
"average_last_fragment_length": 150.0,
"maximum_length": 150.0,
"maximum_first_fragment_length": 150.0,
"maximum_last_fragment_length": 150.0,
"average_quality": 35.1,
"insert_size_average": 230.1,
"insert_size_standard_deviation": 108.4,
"inward_oriented_pairs": 3826866.0,
"outward_oriented_pairs": 726239.0,
"pairs_with_other_orientation": 752.0,
"pairs_on_different_chromosomes": 12.0,
"percentage_of_properly_paired_reads_(%)": 100.0,
"reads_mapped_percent": 99.99962672093999,
"reads_mapped_and_paired_percent": 99.99913267512525,
"reads_unmapped_percent": 0.0003732790600218456,
"reads_properly_paired_percent": 99.95612873165155,
"reads_paired_percent": 100.0,
"reads_duplicated_percent": 34.175970555747746,
"reads_MQ0_percent": 6.856982629458942,
"reads_QC_failed_percent": 0.0
}
},
"mosdepth": {
"HCC1395_BL": {
"1_x_pc": 100.0,
"5_x_pc": 100.0,
"10_x_pc": 100.0,
"30_x_pc": 100.0,
"50_x_pc": 99.0,
"median_coverage": 149
},
"HCC1395_tumor": {
"1_x_pc": 100.0,
"5_x_pc": 100.0,
"10_x_pc": 100.0,
"30_x_pc": 100.0,
"50_x_pc": 100.0,
"median_coverage": 334
},
"Sig_18_Blood": {
"1_x_pc": 100.0,
"5_x_pc": 100.0,
"10_x_pc": 100.0,
"30_x_pc": 100.0,
"50_x_pc": 99.0,
"median_coverage": 195
},
"Sig_18_tissue": {
"1_x_pc": 100.0,
"5_x_pc": 100.0,
"10_x_pc": 100.0,
"30_x_pc": 100.0,
"50_x_pc": 100.0,
"median_coverage": 839
}
}
},
"report_general_stats_headers": {
"samtools": {
"error_rate": {
"title": "Error rate",
"description": "Error rate: mismatches (NM) / bases mapped (CIGAR)",
"min": 0,
"max": 100,
"suffix": "%",
"scale": "OrRd",
"format": "{:,.2f}",
"modify": null,
"hidden": false,
"namespace": "Samtools Flagstat: stats",
"clean_rid": "samtools_flagstat_stats-error_rate",
"rid": "samtools_flagstat_stats-error_rate",
"placement": 1000
},
"non-primary_alignments": {
"title": "Non-primary",
"description": "Non-primary alignments (millions)",
"scale": "PuBu",
"shared_key": "read_count",
"hidden": false,
"namespace": "Samtools Flagstat: stats",
"clean_rid": "samtools_flagstat_stats-non_primary_alignments",
"rid": "samtools_flagstat_stats-non_primary_alignments",
"modify": null,
"min": 0,
"suffix": " M",
"placement": 1000
},
"reads_mapped": {
"title": "Reads mapped",
"description": "Reads mapped in the bam file (millions)",
"shared_key": "read_count",
"hidden": false,
"namespace": "Samtools Flagstat: stats",
"clean_rid": "samtools_flagstat_stats-reads_mapped",
"rid": "samtools_flagstat_stats-reads_mapped",
"modify": null,
"min": 0,
"suffix": " M",
"scale": "GnBu",
"placement": 1000
},
"reads_mapped_percent": {
"title": "% Mapped",
"description": "% Mapped reads",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "RdYlGn",
"hidden": false,
"namespace": "Samtools Flagstat: stats",
"clean_rid": "samtools_flagstat_stats-reads_mapped_percent",
"rid": "samtools_flagstat_stats-reads_mapped_percent",
"placement": 1000
},
"reads_properly_paired_percent": {
"title": "% Proper pairs",
"description": "% Properly paired reads",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "RdYlGn",
"hidden": false,
"namespace": "Samtools Flagstat: stats",
"clean_rid": "samtools_flagstat_stats-reads_properly_paired_percent",
"rid": "samtools_flagstat_stats-reads_properly_paired_percent",
"placement": 1000
},
"reads_MQ0_percent": {
"title": "% MapQ 0 reads",
"description": "% of reads that are ambiguously placed (MapQ=0)",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "OrRd",
"hidden": true,
"namespace": "Samtools Flagstat: stats",
"clean_rid": "samtools_flagstat_stats-reads_MQ0_percent",
"rid": "samtools_flagstat_stats-reads_MQ0_percent",
"placement": 1000
},
"raw_total_sequences": {
"title": "Total seqs",
"description": "Total sequences in the bam file (millions)",
"shared_key": "read_count",
"hidden": false,
"namespace": "Samtools Flagstat: stats",
"clean_rid": "samtools_flagstat_stats-raw_total_sequences",
"rid": "samtools_flagstat_stats-raw_total_sequences",
"modify": null,
"min": 0,
"suffix": " M",
"scale": "GnBu",
"placement": 1000
},
"insert_size_average": {
"title": "Mean insert",
"description": "Average insert size",
"suffix": "bp",
"format": "{:,.1f}",
"scale": "Oranges",
"hidden": true,
"namespace": "Samtools Flagstat: stats",
"clean_rid": "samtools_flagstat_stats-insert_size_average",
"rid": "samtools_flagstat_stats-insert_size_average",
"min": null,
"placement": 1000
}
},
"mosdepth": {
"1_x_pc": {
"title": "≥ 1X",
"description": "Fraction of genome with at least 1X coverage",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "RdYlGn",
"hidden": true,
"namespace": "Mosdepth",
"clean_rid": "mosdepth-1_x_pc",
"rid": "mosdepth-1_x_pc",
"placement": 1000
},
"5_x_pc": {
"title": "≥ 5X",
"description": "Fraction of genome with at least 5X coverage",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "RdYlGn",
"hidden": true,
"namespace": "Mosdepth",
"clean_rid": "mosdepth-5_x_pc",
"rid": "mosdepth-5_x_pc",
"placement": 1000
},
"10_x_pc": {
"title": "≥ 10X",
"description": "Fraction of genome with at least 10X coverage",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "RdYlGn",
"hidden": true,
"namespace": "Mosdepth",
"clean_rid": "mosdepth-10_x_pc",
"rid": "mosdepth-10_x_pc",
"placement": 1000
},
"30_x_pc": {
"title": "≥ 30X",
"description": "Fraction of genome with at least 30X coverage",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "RdYlGn",
"hidden": false,
"namespace": "Mosdepth",
"clean_rid": "mosdepth-30_x_pc",
"rid": "mosdepth-30_x_pc",
"placement": 1000
},
"50_x_pc": {
"title": "≥ 50X",
"description": "Fraction of genome with at least 50X coverage",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "RdYlGn",
"hidden": true,
"namespace": "Mosdepth",
"clean_rid": "mosdepth-50_x_pc",
"rid": "mosdepth-50_x_pc",
"placement": 1000
},
"median_coverage": {
"title": "Median",
"description": "Median coverage",
"min": 0,
"suffix": "X",
"scale": "BuPu",
"namespace": "Mosdepth",
"clean_rid": "mosdepth-median_coverage",
"rid": "mosdepth-median_coverage",
"placement": 1000
},
"mean_coverage": {
"title": "Mean Cov.",
"description": "Mean coverage",
"min": 0,
"suffix": "X",
"scale": "BuPu",
"namespace": "Mosdepth"
},
"min_coverage": {
"title": "Min Cov.",
"description": "Minimum coverage",
"min": 0,
"suffix": "X",
"scale": "BuPu",
"hidden": true,
"namespace": "Mosdepth"
},
"max_coverage": {
"title": "Max Cov.",
"description": "Maximum coverage",
"min": 0,
"suffix": "X",
"scale": "BuPu",
"hidden": true,
"namespace": "Mosdepth"
},
"coverage_bases": {
"title": "Mb Total Coverage Bases",
"description": "Total coverage of bases (millions)",
"min": 0,
"shared_key": "base_count",
"scale": "Greens",
"hidden": true,
"namespace": "Mosdepth"
},
"length": {
"title": "Genome length",
"description": "Total length of the genome",
"min": 0,
"scale": "Greys",
"format": "{:,d}",
"hidden": true,
"namespace": "Mosdepth"
}
}
},
"report_creation_date": "2026-06-04, 17:08 UTC",
"report_plot_data": {
"samtools_alignment_plot": {
"id": "samtools_alignment_plot",
"anchor": "samtools_alignment_plot",
"plot_type": "bar plot",
"layout": {
"autosize": true,
"height": 300,
"hoverlabel": {
"namelength": -1,
"bgcolor": "white",
"font": {
"color": "rgba(60,60,60,1)"
}
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"showlegend": true,
"template": {
"layout": {
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"color": "rgba(60,60,60,1)",
"family": "system-ui, -apple-system, 'Segoe UI', Roboto, 'Helvetica Neue', 'Noto Sans', 'Liberation Sans', Arial, sans-serif, 'Apple Color Emoji', 'Segoe UI Emoji', 'Segoe UI Symbol', 'Noto Color Emoji'"
},
"legend": {
"font": {
"color": "rgba(60,60,60,1)"
}
},
"modebar": {
"activecolor": "rgba(80, 80, 80, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(100, 100, 100, 0.5)"
},
"paper_bgcolor": "rgba(0,0,0,0)",
"plot_bgcolor": "rgba(0,0,0,0)",
"title": {
"font": {
"color": "rgba(60,60,60,1)",
"size": 20
}
},
"xaxis": {
"color": "rgba(100,100,100,1)",
"gridcolor": "rgba(128,128,128,0.15)",
"spikecolor": "rgba(60,60,60,1)",
"spikethickness": -3,
"tickfont": {
"color": "rgba(80,80,80,1)",
"size": 10
},
"zerolinecolor": "rgba(128,128,128,0.2)"
},
"yaxis": {
"color": "rgba(100,100,100,1)",
"gridcolor": "rgba(128,128,128,0.15)",
"spikecolor": "rgba(60,60,60,1)",
"spikethickness": -3,
"tickfont": {
"color": "rgba(80,80,80,1)",
"size": 10
},
"zerolinecolor": "rgba(128,128,128,0.2)"
}
}
},
"title": {
"text": "Samtools: stats: Alignment Scores",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true
},
"yaxis": {
"automargin": true,
"showgrid": false,
"categoryorder": "trace",
"type": "category"
},
"barmode": "relative",
"bargroupgap": 0,
"bargap": 0.2,
"legend": {
"tracegroupgap": 0,
"traceorder": "normal"
},
"hovermode": "y unified"
},
"datasets": [
{
"plot_id": "samtools_alignment_plot",
"label": "1",
"uid": "samtools_alignment_plot",
"dconfig": {
"title": "Samtools: stats: Alignment Scores",
"subtitle": "4 bars"
},
"layout": {
"title": {
"text": "Samtools: stats: Alignment Scores
4 bars"
},
"xaxis": {
"title": {
"text": "# Reads"
},
"hoverformat": ",.2f",
"ticksuffix": "",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": 9108467.0
}
},
"yaxis": {
"title": null,
"hoverformat": null,
"ticksuffix": "",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
},
"showlegend": true
},
"trace_params": {
"hovertemplate": "%{meta}: %{x}",
"orientation": "h",
"marker": {
"line": {
"width": 0
}
},
"textposition": "inside",
"insidetextanchor": "start"
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_series": 4,
"cats": [
{
"name": "Mapped (with MQ>0)",
"color": "rgb(67,123,177)",
"data": [
8483867.0,
1559860.0,
3338139.0,
1218145.0
],
"data_pct": [
93.14264409148105,
92.55505740115301,
92.26657018421312,
92.09136674385392
]
},
{
"name": "MQ0",
"color": "rgb(256,153,51)",
"data": [
624566.0,
125468.0,
279782.0,
104606.0
],
"data_pct": [
6.856982629458942,
7.44470525688707,
7.73320869480855,
7.908179658092908
]
},
{
"name": "Unmapped",
"color": "rgb(177,8,76)",
"data": [
34.0,
4.0,
8.0,
6.0
],
"data_pct": [
0.0003732790600218456,
0.00023734195992243664,
0.00022112097832765651,
0.00045359805315715586
]
}
],
"samples": [
"Sig_18_tissue",
"Sig_18_Blood",
"HCC1395_tumor",
"HCC1395_BL"
],
"cats_clustered": null,
"samples_clustered": null,
"group_labels": null,
"offset_groups": null
}
],
"pconfig": {
"id": "samtools_alignment_plot",
"title": "Samtools: stats: Alignment Scores",
"subtitle": null,
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Number of Reads",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": "# Reads",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"series_label": "samples",
"flat_if_very_large": true,
"stacking": "relative",
"hide_empty": null,
"hide_zero_cats": true,
"sort_samples": true,
"cluster_samples": false,
"cluster_method": "complete",
"cluster_switch_clustered_active": true,
"use_legend": null,
"suffix": null,
"lab_format": null,
"sample_groups": null
},
"add_log_tab": false,
"add_pct_tab": true,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"xaxis"
],
"square": false,
"flat": false,
"defer_render": false,
"section_anchor": null,
"module_anchor": null,
"sort_switch_sorted_active": false,
"cluster_switch_clustered_active": true
},
"samtools-stats-dp": {
"id": "samtools-stats-dp",
"anchor": "samtools-stats-dp",
"plot_type": "violin plot",
"layout": {
"autosize": true,
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 40,
"l": 60,
"pad": 0,
"r": 15,
"t": 50
},
"showlegend": false,
"template": {
"layout": {
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"color": "rgba(60,60,60,1)",
"family": "system-ui, -apple-system, 'Segoe UI', Roboto, 'Helvetica Neue', 'Noto Sans', 'Liberation Sans', Arial, sans-serif, 'Apple Color Emoji', 'Segoe UI Emoji', 'Segoe UI Symbol', 'Noto Color Emoji'"
},
"legend": {
"font": {
"color": "rgba(60,60,60,1)"
}
},
"modebar": {
"activecolor": "rgba(80, 80, 80, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(100, 100, 100, 0.5)"
},
"paper_bgcolor": "rgba(0,0,0,0)",
"plot_bgcolor": "rgba(0,0,0,0)",
"title": {
"font": {
"color": "rgba(60,60,60,1)",
"size": 20
}
},
"xaxis": {
"color": "rgba(100,100,100,1)",
"gridcolor": "rgba(128,128,128,0.15)",
"spikecolor": "rgba(60,60,60,1)",
"spikethickness": -3,
"tickfont": {
"color": "rgba(80,80,80,1)",
"size": 10
},
"zerolinecolor": "rgba(128,128,128,0.2)"
},
"yaxis": {
"color": "rgba(100,100,100,1)",
"gridcolor": "rgba(128,128,128,0.15)",
"spikecolor": "rgba(60,60,60,1)",
"spikethickness": -3,
"tickfont": {
"color": "rgba(80,80,80,1)",
"size": 10
},
"zerolinecolor": "rgba(128,128,128,0.2)"
}
}
},
"title": {
"text": "Samtools: stats: Alignment Stats",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": false,
"tickfont": {
"size": 9,
"color": "rgba(0,0,0,0.5)"
},
"gridcolor": "rgba(0,0,0,0.1)",
"zerolinecolor": "rgba(0,0,0,0.1)"
},
"yaxis": {
"automargin": true,
"tickfont": {
"size": 9,
"color": "rgba(0,0,0,0.5)"
},
"gridcolor": "rgba(0,0,0,0.1)",
"zerolinecolor": "rgba(0,0,0,0.1)"
},
"violingap": 0,
"grid": {
"columns": 1,
"roworder": "top to bottom",
"ygap": 0.4
}
},
"datasets": [
{
"plot_id": "samtools-stats-dp",
"label": "1",
"uid": "samtools-stats-dp",
"dconfig": {
"ylab": "",
"title": "Samtools: stats: Alignment Stats",
"subtitle": "4 samples"
},
"layout": {
"title": {
"text": "Samtools: stats: Alignment Stats
4 samples"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": null
},
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": ""
},
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
}
},
"trace_params": {
"hovertemplate": "%{text}: %{x}",
"orientation": "h",
"box": {
"visible": true
},
"meanline": {
"visible": true
},
"fillcolor": "#999999",
"line": {
"width": 0
},
"opacity": 1,
"points": false,
"hoveron": "points"
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_series": 4,
"metrics": [
"raw_total_sequences",
"reads_mapped_and_paired",
"reads_properly_paired",
"reads_duplicated",
"reads_QC_failed",
"reads_MQ0",
"bases_mapped__cigar",
"bases_trimmed",
"bases_duplicated",
"pairs_on_different_chromosomes",
"pairs_with_other_orientation",
"inward_oriented_pairs",
"outward_oriented_pairs"
],
"header_by_metric": {
"raw_total_sequences": {
"title": "Total sequences",
"description": "Total sequences",
"suffix": "M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"reads_mapped_and_paired": {
"title": "Mapped & paired",
"description": "Paired-end technology bit set + both mates mapped",
"suffix": "M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"reads_properly_paired": {
"title": "Properly paired",
"description": "Proper-pair bit set",
"suffix": "M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"reads_duplicated": {
"title": "Duplicated",
"description": "PCR or optical duplicate bit set",
"suffix": "M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"reads_QC_failed": {
"title": "QC Failed",
"description": "QC Failed",
"suffix": "M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"reads_MQ0": {
"title": "Reads MQ0",
"description": "Reads mapped and MQ=0",
"suffix": "M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"bases_mapped__cigar": {
"title": "Mapped bases (CIGAR)",
"description": "Mapped bases (CIGAR)",
"suffix": "Mb",
"dmin": 0.0,
"dmax": 1280.357724,
"hidden": false,
"xaxis": {
"ticksuffix": "Mb",
"tickvals": null,
"range": [
-6.40178862,
1286.7915215630999
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"bases_trimmed": {
"title": "Bases Trimmed",
"description": "Bases Trimmed",
"suffix": "Mb",
"dmin": 0.0,
"dmax": 1280.357724,
"hidden": false,
"xaxis": {
"ticksuffix": "Mb",
"tickvals": null,
"range": [
-6.40178862,
1286.7915215630999
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"bases_duplicated": {
"title": "Duplicated bases",
"description": "Duplicated bases",
"suffix": "Mb",
"dmin": 0.0,
"dmax": 1280.357724,
"hidden": false,
"xaxis": {
"ticksuffix": "Mb",
"tickvals": null,
"range": [
-6.40178862,
1286.7915215630999
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"pairs_on_different_chromosomes": {
"title": "Diff chromosomes",
"description": "Pairs on different chromosomes",
"suffix": "M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"pairs_with_other_orientation": {
"title": "Other orientation",
"description": "Pairs with other orientation",
"suffix": "M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"inward_oriented_pairs": {
"title": "Inward pairs",
"description": "Inward oriented pairs",
"suffix": "M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
},
"outward_oriented_pairs": {
"title": "Outward pairs",
"description": "Outward oriented pairs",
"suffix": "M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
}
},
"violin_value_by_sample_by_metric": {
"raw_total_sequences": {
"HCC1395_BL": 1.322757,
"HCC1395_tumor": 3.6179289999999997,
"Sig_18_Blood": 1.6853319999999998,
"Sig_18_tissue": 9.108467
},
"reads_mapped_and_paired": {
"HCC1395_BL": 1.322741,
"HCC1395_tumor": 3.617902,
"Sig_18_Blood": 1.685315,
"Sig_18_tissue": 9.108388
},
"reads_properly_paired": {
"HCC1395_BL": 1.3223589999999998,
"HCC1395_tumor": 3.6167,
"Sig_18_Blood": 1.68498,
"Sig_18_tissue": 9.104471
},
"reads_duplicated": {
"HCC1395_BL": 0.29092399999999996,
"HCC1395_tumor": 1.5258939999999999,
"Sig_18_Blood": 0.258756,
"Sig_18_tissue": 3.112907
},
"reads_QC_failed": {
"HCC1395_BL": 0.0,
"HCC1395_tumor": 0.0,
"Sig_18_Blood": 0.0,
"Sig_18_tissue": 0.0
},
"reads_MQ0": {
"HCC1395_BL": 0.10460599999999999,
"HCC1395_tumor": 0.279782,
"Sig_18_Blood": 0.125468,
"Sig_18_tissue": 0.624566
},
"bases_mapped__cigar": {
"HCC1395_BL": 189.673024,
"HCC1395_tumor": 516.961994,
"Sig_18_Blood": 242.86672199999998,
"Sig_18_tissue": 1280.357724
},
"bases_trimmed": {
"HCC1395_BL": 0.0,
"HCC1395_tumor": 0.0,
"Sig_18_Blood": 0.0,
"Sig_18_tissue": 0.0
},
"bases_duplicated": {
"HCC1395_BL": 43.6386,
"HCC1395_tumor": 228.8841,
"Sig_18_Blood": 38.8134,
"Sig_18_tissue": 466.93604999999997
},
"pairs_on_different_chromosomes": {
"HCC1395_BL": 0.0,
"HCC1395_tumor": 3e-06,
"Sig_18_Blood": 2e-06,
"Sig_18_tissue": 1.2e-05
},
"pairs_with_other_orientation": {
"HCC1395_BL": 0.000165,
"HCC1395_tumor": 0.000511,
"Sig_18_Blood": 0.00015,
"Sig_18_tissue": 0.000752
},
"inward_oriented_pairs": {
"HCC1395_BL": 0.586702,
"HCC1395_tumor": 1.593119,
"Sig_18_Blood": 0.756292,
"Sig_18_tissue": 3.826866
},
"outward_oriented_pairs": {
"HCC1395_BL": 0.074267,
"HCC1395_tumor": 0.215049,
"Sig_18_Blood": 0.085991,
"Sig_18_tissue": 0.726239
}
},
"scatter_value_by_sample_by_metric": {
"raw_total_sequences": {},
"reads_mapped_and_paired": {},
"reads_properly_paired": {},
"reads_duplicated": {},
"reads_QC_failed": {},
"reads_MQ0": {},
"bases_mapped__cigar": {},
"bases_trimmed": {},
"bases_duplicated": {},
"pairs_on_different_chromosomes": {},
"pairs_with_other_orientation": {},
"inward_oriented_pairs": {},
"outward_oriented_pairs": {}
},
"all_samples": [
"HCC1395_BL",
"HCC1395_tumor",
"Sig_18_Blood",
"Sig_18_tissue"
],
"scatter_trace_params": {
"mode": "markers",
"marker": {
"size": 4,
"color": "#0b79e6",
"opacity": 1
},
"showlegend": false,
"hovertemplate": "%{text}: %{x}",
"hoverlabel": {
"bgcolor": "white",
"font": {
"color": "rgba(60,60,60,1)"
}
}
},
"dt": {
"id": "samtools-stats-dp",
"anchor": "samtools-stats-dp_table",
"pconfig": {
"id": "samtools-stats-dp",
"title": "Samtools: stats: Alignment Stats",
"subtitle": null,
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": null,
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"series_label": "samples",
"flat_if_very_large": false,
"namespace": "",
"save_file": false,
"raw_data_fn": null,
"defaultsort": null,
"sortRows": true,
"sort_rows": true,
"only_defined_headers": true,
"col1_header": "Sample Name",
"no_beeswarm": false,
"no_violin": false,
"scale": "GnBu",
"min": null,
"parse_numeric": true,
"rows_are_samples": true
},
"section_by_id": {
"samtools-stats-dp_table": {
"column_by_key": {
"raw_total_sequences": {
"rid": "raw_total_sequences",
"clean_rid": "raw_total_sequences",
"title": "Total sequences",
"description": "Total sequences",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": 2,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"reads_mapped_and_paired": {
"rid": "reads_mapped_and_paired",
"clean_rid": "reads_mapped_and_paired",
"title": "Mapped & paired",
"description": "Paired-end technology bit set + both mates mapped",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": 2,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"reads_properly_paired": {
"rid": "reads_properly_paired",
"clean_rid": "reads_properly_paired",
"title": "Properly paired",
"description": "Proper-pair bit set",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": 2,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"reads_duplicated": {
"rid": "reads_duplicated",
"clean_rid": "reads_duplicated",
"title": "Duplicated",
"description": "PCR or optical duplicate bit set",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": 2,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"reads_QC_failed": {
"rid": "reads_QC_failed",
"clean_rid": "reads_QC_failed",
"title": "QC Failed",
"description": "QC Failed",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": 2,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"reads_MQ0": {
"rid": "reads_MQ0",
"clean_rid": "reads_MQ0",
"title": "Reads MQ0",
"description": "Reads mapped and MQ=0",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": 2,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"bases_mapped_(cigar)": {
"rid": "bases_mapped__cigar",
"clean_rid": "bases_mapped__cigar",
"title": "Mapped bases (CIGAR)",
"description": "Mapped bases (CIGAR)",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 1280.357724,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "base_count",
"tt_decimals": 2,
"suffix": "Mb",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"bases_trimmed": {
"rid": "bases_trimmed",
"clean_rid": "bases_trimmed",
"title": "Bases Trimmed",
"description": "Bases Trimmed",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 1280.357724,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "base_count",
"tt_decimals": 2,
"suffix": "Mb",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"bases_duplicated": {
"rid": "bases_duplicated",
"clean_rid": "bases_duplicated",
"title": "Duplicated bases",
"description": "Duplicated bases",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 1280.357724,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "base_count",
"tt_decimals": 2,
"suffix": "Mb",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"pairs_on_different_chromosomes": {
"rid": "pairs_on_different_chromosomes",
"clean_rid": "pairs_on_different_chromosomes",
"title": "Diff chromosomes",
"description": "Pairs on different chromosomes",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": 2,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"pairs_with_other_orientation": {
"rid": "pairs_with_other_orientation",
"clean_rid": "pairs_with_other_orientation",
"title": "Other orientation",
"description": "Pairs with other orientation",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": 2,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"inward_oriented_pairs": {
"rid": "inward_oriented_pairs",
"clean_rid": "inward_oriented_pairs",
"title": "Inward pairs",
"description": "Inward oriented pairs",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": 2,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"outward_oriented_pairs": {
"rid": "outward_oriented_pairs",
"clean_rid": "outward_oriented_pairs",
"title": "Outward pairs",
"description": "Outward oriented pairs",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": 2,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
}
},
"rows_by_sgroup": {
"HCC1395_BL": [
{
"sample": "HCC1395_BL",
"data": {
"raw_total_sequences": {
"raw": 1322757.0,
"mod": 1.322757,
"fmt": "1.3"
},
"reads_mapped_and_paired": {
"raw": 1322741.0,
"mod": 1.322741,
"fmt": "1.3"
},
"reads_properly_paired": {
"raw": 1322359.0,
"mod": 1.3223589999999998,
"fmt": "1.3"
},
"reads_duplicated": {
"raw": 290924.0,
"mod": 0.29092399999999996,
"fmt": "0.3"
},
"reads_MQ0": {
"raw": 104606.0,
"mod": 0.10460599999999999,
"fmt": "0.1"
},
"reads_QC_failed": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"bases_mapped_(cigar)": {
"raw": 189673024.0,
"mod": 189.673024,
"fmt": "189.7"
},
"bases_trimmed": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"bases_duplicated": {
"raw": 43638600.0,
"mod": 43.6386,
"fmt": "43.6"
},
"inward_oriented_pairs": {
"raw": 586702.0,
"mod": 0.586702,
"fmt": "0.6"
},
"outward_oriented_pairs": {
"raw": 74267.0,
"mod": 0.074267,
"fmt": "0.1"
},
"pairs_with_other_orientation": {
"raw": 165.0,
"mod": 0.000165,
"fmt": "0.0"
},
"pairs_on_different_chromosomes": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
}
}
}
],
"HCC1395_tumor": [
{
"sample": "HCC1395_tumor",
"data": {
"raw_total_sequences": {
"raw": 3617929.0,
"mod": 3.6179289999999997,
"fmt": "3.6"
},
"reads_mapped_and_paired": {
"raw": 3617902.0,
"mod": 3.617902,
"fmt": "3.6"
},
"reads_properly_paired": {
"raw": 3616700.0,
"mod": 3.6167,
"fmt": "3.6"
},
"reads_duplicated": {
"raw": 1525894.0,
"mod": 1.5258939999999999,
"fmt": "1.5"
},
"reads_MQ0": {
"raw": 279782.0,
"mod": 0.279782,
"fmt": "0.3"
},
"reads_QC_failed": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"bases_mapped_(cigar)": {
"raw": 516961994.0,
"mod": 516.961994,
"fmt": "517.0"
},
"bases_trimmed": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"bases_duplicated": {
"raw": 228884100.0,
"mod": 228.8841,
"fmt": "228.9"
},
"inward_oriented_pairs": {
"raw": 1593119.0,
"mod": 1.593119,
"fmt": "1.6"
},
"outward_oriented_pairs": {
"raw": 215049.0,
"mod": 0.215049,
"fmt": "0.2"
},
"pairs_with_other_orientation": {
"raw": 511.0,
"mod": 0.000511,
"fmt": "0.0"
},
"pairs_on_different_chromosomes": {
"raw": 3.0,
"mod": 3e-06,
"fmt": "0.0"
}
}
}
],
"Sig_18_Blood": [
{
"sample": "Sig_18_Blood",
"data": {
"raw_total_sequences": {
"raw": 1685332.0,
"mod": 1.6853319999999998,
"fmt": "1.7"
},
"reads_mapped_and_paired": {
"raw": 1685315.0,
"mod": 1.685315,
"fmt": "1.7"
},
"reads_properly_paired": {
"raw": 1684980.0,
"mod": 1.68498,
"fmt": "1.7"
},
"reads_duplicated": {
"raw": 258756.0,
"mod": 0.258756,
"fmt": "0.3"
},
"reads_MQ0": {
"raw": 125468.0,
"mod": 0.125468,
"fmt": "0.1"
},
"reads_QC_failed": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"bases_mapped_(cigar)": {
"raw": 242866722.0,
"mod": 242.86672199999998,
"fmt": "242.9"
},
"bases_trimmed": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"bases_duplicated": {
"raw": 38813400.0,
"mod": 38.8134,
"fmt": "38.8"
},
"inward_oriented_pairs": {
"raw": 756292.0,
"mod": 0.756292,
"fmt": "0.8"
},
"outward_oriented_pairs": {
"raw": 85991.0,
"mod": 0.085991,
"fmt": "0.1"
},
"pairs_with_other_orientation": {
"raw": 150.0,
"mod": 0.00015,
"fmt": "0.0"
},
"pairs_on_different_chromosomes": {
"raw": 2.0,
"mod": 2e-06,
"fmt": "0.0"
}
}
}
],
"Sig_18_tissue": [
{
"sample": "Sig_18_tissue",
"data": {
"raw_total_sequences": {
"raw": 9108467.0,
"mod": 9.108467,
"fmt": "9.1"
},
"reads_mapped_and_paired": {
"raw": 9108388.0,
"mod": 9.108388,
"fmt": "9.1"
},
"reads_properly_paired": {
"raw": 9104471.0,
"mod": 9.104471,
"fmt": "9.1"
},
"reads_duplicated": {
"raw": 3112907.0,
"mod": 3.112907,
"fmt": "3.1"
},
"reads_MQ0": {
"raw": 624566.0,
"mod": 0.624566,
"fmt": "0.6"
},
"reads_QC_failed": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"bases_mapped_(cigar)": {
"raw": 1280357724.0,
"mod": 1280.357724,
"fmt": "1,280.4"
},
"bases_trimmed": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"bases_duplicated": {
"raw": 466936050.0,
"mod": 466.93604999999997,
"fmt": "466.9"
},
"inward_oriented_pairs": {
"raw": 3826866.0,
"mod": 3.826866,
"fmt": "3.8"
},
"outward_oriented_pairs": {
"raw": 726239.0,
"mod": 0.726239,
"fmt": "0.7"
},
"pairs_with_other_orientation": {
"raw": 752.0,
"mod": 0.000752,
"fmt": "0.0"
},
"pairs_on_different_chromosomes": {
"raw": 12.0,
"mod": 1.2e-05,
"fmt": "0.0"
}
}
}
]
}
}
},
"headers_in_order": {
"1000.0": [
[
0,
"raw_total_sequences"
],
[
0,
"reads_mapped_and_paired"
],
[
0,
"reads_properly_paired"
],
[
0,
"reads_duplicated"
],
[
0,
"reads_QC_failed"
],
[
0,
"reads_MQ0"
],
[
0,
"bases_mapped_(cigar)"
],
[
0,
"bases_trimmed"
],
[
0,
"bases_duplicated"
],
[
0,
"pairs_on_different_chromosomes"
],
[
0,
"pairs_with_other_orientation"
],
[
0,
"inward_oriented_pairs"
],
[
0,
"outward_oriented_pairs"
]
]
}
},
"show_table_by_default": false,
"is_downsampled": false
}
],
"pconfig": {
"id": "samtools-stats-dp",
"title": "Samtools: stats: Alignment Stats",
"subtitle": null,
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": null,
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"series_label": "samples",
"flat_if_very_large": false,
"namespace": "",
"save_file": false,
"raw_data_fn": null,
"defaultsort": null,
"sortRows": true,
"sort_rows": true,
"only_defined_headers": true,
"col1_header": "Sample Name",
"no_beeswarm": false,
"no_violin": false,
"scale": "GnBu",
"min": null,
"parse_numeric": true,
"rows_are_samples": true
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [],
"square": false,
"flat": false,
"defer_render": false,
"section_anchor": null,
"module_anchor": null,
"violin_height": 70,
"extra_height": 63,
"no_violin": false,
"show_table": true,
"show_table_by_default": false,
"n_samples": 4,
"table_anchor": "samtools-stats-dp_table"
},
"mosdepth-cumcoverage-dist-id": {
"id": "mosdepth-cumcoverage-dist-id",
"anchor": "mosdepth-cumcoverage-dist-id",
"plot_type": "x/y line",
"layout": {
"autosize": true,
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"showlegend": false,
"template": {
"layout": {
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"color": "rgba(60,60,60,1)",
"family": "system-ui, -apple-system, 'Segoe UI', Roboto, 'Helvetica Neue', 'Noto Sans', 'Liberation Sans', Arial, sans-serif, 'Apple Color Emoji', 'Segoe UI Emoji', 'Segoe UI Symbol', 'Noto Color Emoji'"
},
"legend": {
"font": {
"color": "rgba(60,60,60,1)"
}
},
"modebar": {
"activecolor": "rgba(80, 80, 80, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(100, 100, 100, 0.5)"
},
"paper_bgcolor": "rgba(0,0,0,0)",
"plot_bgcolor": "rgba(0,0,0,0)",
"title": {
"font": {
"color": "rgba(60,60,60,1)",
"size": 20
}
},
"xaxis": {
"color": "rgba(100,100,100,1)",
"gridcolor": "rgba(128,128,128,0.15)",
"spikecolor": "rgba(60,60,60,1)",
"spikethickness": -3,
"tickfont": {
"color": "rgba(80,80,80,1)",
"size": 10
},
"zerolinecolor": "rgba(128,128,128,0.2)"
},
"yaxis": {
"color": "rgba(100,100,100,1)",
"gridcolor": "rgba(128,128,128,0.15)",
"spikecolor": "rgba(60,60,60,1)",
"spikethickness": -3,
"tickfont": {
"color": "rgba(80,80,80,1)",
"size": 10
},
"zerolinecolor": "rgba(128,128,128,0.2)"
}
}
},
"title": {
"text": "Mosdepth: Cumulative coverage distribution",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true
},
"yaxis": {
"automargin": true
},
"hoverdistance": -1
},
"datasets": [
{
"plot_id": "mosdepth-cumcoverage-dist-id",
"label": "1",
"uid": "mosdepth-cumcoverage-dist-id",
"dconfig": {
"title": "Mosdepth: Cumulative coverage distribution",
"subtitle": "4 lines"
},
"layout": {
"title": {
"text": "Mosdepth: Cumulative coverage distribution
4 lines"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": "X",
"title": {
"text": "Cumulative Coverage (X)"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": 5257
}
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "%",
"title": {
"text": "% bases in genome/regions covered by at least X reads"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": 100
}
}
},
"trace_params": {
"hovertemplate": "%{text}
%{x}: %{y:.2f}%",
"mode": "lines",
"line": {
"width": 2
}
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_series": 4,
"lines": [
{
"name": "HCC1395_BL",
"pairs": [
[
0,
100.0
],
[
2,
100.0
],
[
5,
100.0
],
[
7,
100.0
],
[
9,
100.0
],
[
12,
100.0
],
[
14,
100.0
],
[
16,
100.0
],
[
19,
100.0
],
[
21,
100.0
],
[
23,
100.0
],
[
26,
100.0
],
[
28,
100.0
],
[
30,
100.0
],
[
32,
100.0
],
[
35,
100.0
],
[
37,
99.0
],
[
39,
99.0
],
[
42,
99.0
],
[
44,
99.0
],
[
46,
99.0
],
[
49,
99.0
],
[
51,
98.0
],
[
53,
98.0
],
[
56,
98.0
],
[
58,
97.0
],
[
60,
97.0
],
[
63,
96.0
],
[
65,
95.0
],
[
67,
95.0
],
[
70,
94.0
],
[
72,
93.0
],
[
74,
92.0
],
[
77,
91.0
],
[
79,
90.0
],
[
81,
89.0
],
[
83,
89.0
],
[
86,
87.0
],
[
88,
86.0
],
[
90,
85.0
],
[
93,
83.0
],
[
95,
82.0
],
[
97,
81.0
],
[
100,
79.0
],
[
102,
78.0
],
[
104,
77.0
],
[
107,
75.0
],
[
109,
74.0
],
[
111,
73.0
],
[
114,
71.0
],
[
116,
70.0
],
[
118,
68.0
],
[
121,
67.0
],
[
123,
65.0
],
[
125,
64.0
],
[
128,
62.0
],
[
130,
61.0
],
[
132,
60.0
],
[
134,
59.0
],
[
137,
56.99999999999999
],
[
139,
56.00000000000001
],
[
141,
55.00000000000001
],
[
144,
53.0
],
[
146,
52.0
],
[
148,
50.0
],
[
151,
49.0
],
[
153,
48.0
],
[
155,
47.0
],
[
158,
45.0
],
[
160,
44.0
],
[
162,
43.0
],
[
165,
42.0
],
[
167,
41.0
],
[
169,
40.0
],
[
172,
38.0
],
[
174,
38.0
],
[
176,
37.0
],
[
179,
35.0
],
[
181,
35.0
],
[
183,
34.0
],
[
185,
33.0
],
[
188,
32.0
],
[
190,
31.0
],
[
192,
30.0
],
[
195,
28.999999999999996
],
[
197,
28.999999999999996
],
[
199,
28.000000000000004
],
[
202,
27.0
],
[
204,
26.0
],
[
206,
26.0
],
[
209,
25.0
],
[
211,
25.0
],
[
213,
24.0
],
[
216,
23.0
],
[
218,
23.0
],
[
220,
22.0
],
[
223,
22.0
],
[
225,
21.0
],
[
227,
21.0
],
[
230,
20.0
],
[
232,
20.0
],
[
234,
20.0
],
[
237,
19.0
],
[
239,
19.0
],
[
241,
19.0
],
[
243,
18.0
],
[
246,
18.0
],
[
248,
18.0
],
[
250,
18.0
],
[
253,
17.0
],
[
255,
17.0
],
[
257,
17.0
],
[
260,
17.0
],
[
262,
16.0
],
[
264,
16.0
],
[
267,
16.0
],
[
269,
16.0
],
[
271,
16.0
],
[
274,
16.0
],
[
276,
16.0
],
[
278,
15.0
],
[
281,
15.0
],
[
283,
15.0
],
[
285,
15.0
],
[
288,
15.0
],
[
290,
15.0
],
[
292,
15.0
],
[
294,
15.0
],
[
297,
15.0
],
[
299,
15.0
],
[
301,
15.0
],
[
304,
15.0
],
[
306,
14.000000000000002
],
[
308,
14.000000000000002
],
[
311,
14.000000000000002
],
[
313,
14.000000000000002
],
[
315,
14.000000000000002
],
[
318,
14.000000000000002
],
[
320,
14.000000000000002
],
[
322,
14.000000000000002
],
[
325,
14.000000000000002
],
[
327,
14.000000000000002
],
[
329,
14.000000000000002
],
[
332,
14.000000000000002
],
[
334,
14.000000000000002
],
[
336,
14.000000000000002
],
[
339,
14.000000000000002
],
[
341,
14.000000000000002
],
[
343,
14.000000000000002
],
[
345,
13.0
],
[
348,
13.0
],
[
350,
13.0
],
[
352,
13.0
],
[
355,
13.0
],
[
357,
13.0
],
[
359,
13.0
],
[
362,
13.0
],
[
364,
13.0
],
[
366,
13.0
],
[
369,
13.0
],
[
371,
13.0
],
[
373,
13.0
],
[
376,
13.0
],
[
378,
13.0
],
[
380,
13.0
],
[
383,
13.0
],
[
385,
13.0
],
[
387,
13.0
],
[
390,
13.0
],
[
392,
13.0
],
[
394,
13.0
],
[
396,
13.0
],
[
399,
13.0
],
[
401,
13.0
],
[
403,
13.0
],
[
406,
13.0
],
[
408,
13.0
],
[
410,
13.0
],
[
413,
13.0
],
[
415,
12.0
],
[
417,
12.0
],
[
420,
12.0
],
[
422,
12.0
],
[
424,
12.0
],
[
427,
12.0
],
[
429,
12.0
],
[
431,
12.0
],
[
434,
12.0
],
[
436,
12.0
],
[
438,
12.0
],
[
441,
12.0
],
[
443,
12.0
],
[
445,
12.0
],
[
447,
12.0
],
[
450,
12.0
],
[
452,
12.0
],
[
454,
12.0
],
[
457,
12.0
],
[
459,
12.0
],
[
461,
12.0
],
[
464,
12.0
],
[
466,
12.0
],
[
468,
12.0
],
[
471,
12.0
],
[
473,
12.0
],
[
475,
12.0
],
[
478,
12.0
],
[
480,
12.0
],
[
482,
12.0
],
[
485,
12.0
],
[
487,
12.0
],
[
489,
12.0
],
[
492,
12.0
],
[
494,
12.0
],
[
496,
12.0
],
[
499,
12.0
],
[
501,
12.0
],
[
503,
12.0
],
[
505,
12.0
],
[
508,
12.0
],
[
510,
12.0
],
[
512,
12.0
],
[
515,
12.0
],
[
517,
12.0
],
[
519,
11.0
],
[
522,
11.0
],
[
524,
11.0
],
[
526,
11.0
],
[
529,
11.0
],
[
531,
11.0
],
[
533,
11.0
],
[
536,
11.0
],
[
538,
11.0
],
[
540,
11.0
],
[
543,
11.0
],
[
545,
11.0
],
[
547,
11.0
],
[
550,
11.0
],
[
552,
11.0
],
[
554,
11.0
],
[
556,
11.0
],
[
559,
11.0
],
[
561,
11.0
],
[
563,
11.0
],
[
566,
11.0
],
[
568,
11.0
],
[
570,
11.0
],
[
573,
11.0
],
[
575,
11.0
],
[
577,
11.0
],
[
580,
11.0
],
[
582,
11.0
],
[
584,
11.0
],
[
587,
11.0
],
[
589,
11.0
],
[
591,
11.0
],
[
594,
11.0
],
[
596,
11.0
],
[
598,
11.0
],
[
601,
11.0
],
[
603,
11.0
],
[
605,
11.0
],
[
607,
11.0
],
[
610,
10.0
],
[
612,
10.0
],
[
614,
10.0
],
[
617,
10.0
],
[
619,
10.0
],
[
621,
10.0
],
[
624,
10.0
],
[
626,
10.0
],
[
628,
10.0
],
[
631,
10.0
],
[
633,
10.0
],
[
635,
10.0
],
[
638,
10.0
],
[
640,
10.0
],
[
642,
10.0
],
[
645,
10.0
],
[
647,
10.0
],
[
649,
10.0
],
[
652,
10.0
],
[
654,
10.0
],
[
656,
10.0
],
[
658,
10.0
],
[
661,
10.0
],
[
663,
10.0
],
[
665,
10.0
],
[
668,
9.0
],
[
670,
9.0
],
[
672,
9.0
],
[
675,
9.0
],
[
677,
9.0
],
[
679,
9.0
],
[
682,
9.0
],
[
684,
9.0
],
[
686,
9.0
],
[
689,
9.0
],
[
691,
9.0
],
[
693,
9.0
],
[
696,
9.0
],
[
698,
9.0
],
[
700,
9.0
],
[
703,
9.0
],
[
705,
9.0
],
[
707,
9.0
],
[
710,
9.0
],
[
712,
9.0
],
[
714,
9.0
],
[
716,
9.0
],
[
719,
9.0
],
[
721,
9.0
],
[
723,
9.0
],
[
726,
8.0
],
[
728,
8.0
],
[
730,
8.0
],
[
733,
8.0
],
[
735,
8.0
],
[
737,
8.0
],
[
740,
8.0
],
[
742,
8.0
],
[
744,
8.0
],
[
747,
8.0
],
[
749,
8.0
],
[
751,
8.0
],
[
754,
8.0
],
[
756,
8.0
],
[
758,
8.0
],
[
761,
8.0
],
[
763,
8.0
],
[
765,
8.0
],
[
767,
8.0
],
[
770,
8.0
],
[
772,
8.0
],
[
774,
8.0
],
[
777,
8.0
],
[
779,
8.0
],
[
781,
7.000000000000001
],
[
784,
7.000000000000001
],
[
786,
7.000000000000001
],
[
788,
7.000000000000001
],
[
791,
7.000000000000001
],
[
793,
7.000000000000001
],
[
795,
7.000000000000001
],
[
798,
7.000000000000001
],
[
800,
7.000000000000001
],
[
802,
7.000000000000001
],
[
805,
7.000000000000001
],
[
807,
7.000000000000001
],
[
809,
7.000000000000001
],
[
812,
7.000000000000001
],
[
814,
7.000000000000001
],
[
816,
7.000000000000001
],
[
818,
7.000000000000001
],
[
821,
7.000000000000001
],
[
823,
7.000000000000001
],
[
825,
7.000000000000001
],
[
828,
6.0
],
[
830,
6.0
],
[
832,
6.0
],
[
835,
6.0
],
[
837,
6.0
],
[
839,
6.0
],
[
842,
6.0
],
[
844,
6.0
],
[
846,
6.0
],
[
849,
6.0
],
[
851,
6.0
],
[
853,
6.0
],
[
856,
6.0
],
[
858,
6.0
],
[
860,
6.0
],
[
863,
6.0
],
[
865,
6.0
],
[
867,
6.0
],
[
869,
5.0
],
[
872,
5.0
],
[
874,
5.0
],
[
876,
5.0
],
[
879,
5.0
],
[
881,
5.0
],
[
883,
5.0
],
[
886,
5.0
],
[
888,
5.0
],
[
890,
5.0
],
[
893,
5.0
],
[
895,
5.0
],
[
897,
5.0
],
[
900,
5.0
],
[
902,
5.0
],
[
904,
5.0
],
[
907,
5.0
],
[
909,
5.0
],
[
911,
5.0
],
[
914,
5.0
],
[
916,
4.0
],
[
918,
4.0
],
[
920,
4.0
],
[
923,
4.0
],
[
925,
4.0
],
[
927,
4.0
],
[
930,
4.0
],
[
932,
4.0
],
[
934,
4.0
],
[
937,
4.0
],
[
939,
4.0
],
[
941,
4.0
],
[
944,
4.0
],
[
946,
4.0
],
[
948,
4.0
],
[
951,
4.0
],
[
953,
4.0
],
[
955,
4.0
],
[
958,
4.0
],
[
960,
4.0
],
[
962,
4.0
],
[
965,
3.0
],
[
967,
3.0
],
[
969,
3.0
],
[
972,
3.0
],
[
974,
3.0
],
[
976,
3.0
],
[
978,
3.0
],
[
981,
3.0
],
[
983,
3.0
],
[
985,
3.0
],
[
988,
3.0
],
[
990,
3.0
],
[
992,
3.0
],
[
995,
3.0
],
[
997,
3.0
],
[
999,
3.0
],
[
1002,
3.0
],
[
1004,
3.0
],
[
1006,
3.0
],
[
1009,
3.0
],
[
1011,
3.0
],
[
1013,
2.0
],
[
1016,
2.0
],
[
1018,
2.0
],
[
1020,
2.0
],
[
1023,
2.0
],
[
1025,
2.0
],
[
1027,
2.0
],
[
1029,
2.0
],
[
1032,
2.0
],
[
1034,
2.0
],
[
1036,
2.0
],
[
1039,
2.0
],
[
1041,
2.0
],
[
1043,
2.0
],
[
1046,
2.0
],
[
1048,
2.0
],
[
1050,
2.0
],
[
1053,
2.0
],
[
1055,
2.0
],
[
1057,
2.0
],
[
1060,
2.0
],
[
1062,
2.0
],
[
1064,
2.0
],
[
1067,
2.0
],
[
1069,
2.0
],
[
1071,
2.0
],
[
1074,
1.0
],
[
1076,
1.0
],
[
1078,
1.0
],
[
1080,
1.0
],
[
1083,
1.0
],
[
1085,
1.0
],
[
1087,
1.0
],
[
1090,
1.0
],
[
1092,
1.0
],
[
1094,
1.0
],
[
1097,
1.0
],
[
1099,
1.0
],
[
1101,
1.0
],
[
1104,
1.0
],
[
1106,
1.0
],
[
1108,
1.0
],
[
1111,
1.0
],
[
1113,
1.0
],
[
1115,
1.0
],
[
1118,
1.0
],
[
1120,
1.0
],
[
1122,
1.0
],
[
1125,
1.0
],
[
1127,
1.0
],
[
1129,
1.0
],
[
1131,
1.0
],
[
1134,
1.0
],
[
1136,
1.0
],
[
1138,
1.0
],
[
1141,
1.0
],
[
1143,
1.0
],
[
1145,
1.0
],
[
1148,
1.0
],
[
1150,
1.0
],
[
1152,
1.0
],
[
1155,
1.0
],
[
1157,
1.0
]
],
"color": "rgba(124,181,236,1)",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null,
"extra_trace_params": {}
},
{
"name": "HCC1395_tumor",
"pairs": [
[
0,
100.0
],
[
3,
100.0
],
[
7,
100.0
],
[
10,
100.0
],
[
13,
100.0
],
[
16,
100.0
],
[
20,
100.0
],
[
23,
100.0
],
[
26,
100.0
],
[
30,
100.0
],
[
33,
100.0
],
[
36,
100.0
],
[
40,
100.0
],
[
43,
100.0
],
[
46,
100.0
],
[
49,
100.0
],
[
53,
100.0
],
[
56,
100.0
],
[
59,
100.0
],
[
63,
100.0
],
[
66,
100.0
],
[
69,
100.0
],
[
72,
99.0
],
[
76,
99.0
],
[
79,
99.0
],
[
82,
99.0
],
[
86,
99.0
],
[
89,
99.0
],
[
92,
99.0
],
[
95,
99.0
],
[
99,
99.0
],
[
102,
98.0
],
[
105,
98.0
],
[
109,
98.0
],
[
112,
98.0
],
[
115,
97.0
],
[
119,
97.0
],
[
122,
97.0
],
[
125,
97.0
],
[
128,
96.0
],
[
132,
96.0
],
[
135,
96.0
],
[
138,
95.0
],
[
142,
95.0
],
[
145,
95.0
],
[
148,
94.0
],
[
151,
94.0
],
[
155,
93.0
],
[
158,
93.0
],
[
161,
92.0
],
[
165,
92.0
],
[
168,
91.0
],
[
171,
91.0
],
[
175,
90.0
],
[
178,
89.0
],
[
181,
89.0
],
[
184,
88.0
],
[
188,
87.0
],
[
191,
87.0
],
[
194,
86.0
],
[
198,
85.0
],
[
201,
84.0
],
[
204,
83.0
],
[
207,
83.0
],
[
211,
82.0
],
[
214,
81.0
],
[
217,
80.0
],
[
221,
79.0
],
[
224,
78.0
],
[
227,
78.0
],
[
230,
77.0
],
[
234,
76.0
],
[
237,
75.0
],
[
240,
74.0
],
[
244,
73.0
],
[
247,
72.0
],
[
250,
71.0
],
[
254,
70.0
],
[
257,
70.0
],
[
260,
69.0
],
[
263,
68.0
],
[
267,
67.0
],
[
270,
66.0
],
[
273,
65.0
],
[
277,
64.0
],
[
280,
63.0
],
[
283,
62.0
],
[
286,
62.0
],
[
290,
61.0
],
[
293,
60.0
],
[
296,
59.0
],
[
300,
57.99999999999999
],
[
303,
56.99999999999999
],
[
306,
56.99999999999999
],
[
310,
56.00000000000001
],
[
313,
55.00000000000001
],
[
316,
54.0
],
[
319,
53.0
],
[
323,
52.0
],
[
326,
52.0
],
[
329,
51.0
],
[
333,
50.0
],
[
336,
49.0
],
[
339,
49.0
],
[
342,
48.0
],
[
346,
47.0
],
[
349,
46.0
],
[
352,
45.0
],
[
356,
45.0
],
[
359,
44.0
],
[
362,
43.0
],
[
365,
43.0
],
[
369,
42.0
],
[
372,
41.0
],
[
375,
41.0
],
[
379,
40.0
],
[
382,
39.0
],
[
385,
39.0
],
[
389,
38.0
],
[
392,
37.0
],
[
395,
37.0
],
[
398,
36.0
],
[
402,
36.0
],
[
405,
35.0
],
[
408,
34.0
],
[
412,
34.0
],
[
415,
33.0
],
[
418,
33.0
],
[
421,
32.0
],
[
425,
32.0
],
[
428,
31.0
],
[
431,
31.0
],
[
435,
30.0
],
[
438,
30.0
],
[
441,
28.999999999999996
],
[
444,
28.999999999999996
],
[
448,
28.000000000000004
],
[
451,
28.000000000000004
],
[
454,
27.0
],
[
458,
27.0
],
[
461,
26.0
],
[
464,
26.0
],
[
468,
26.0
],
[
471,
25.0
],
[
474,
25.0
],
[
477,
25.0
],
[
481,
24.0
],
[
484,
24.0
],
[
487,
23.0
],
[
491,
23.0
],
[
494,
23.0
],
[
497,
23.0
],
[
500,
22.0
],
[
504,
22.0
],
[
507,
22.0
],
[
510,
21.0
],
[
514,
21.0
],
[
517,
21.0
],
[
520,
21.0
],
[
524,
20.0
],
[
527,
20.0
],
[
530,
20.0
],
[
533,
20.0
],
[
537,
19.0
],
[
540,
19.0
],
[
543,
19.0
],
[
547,
19.0
],
[
550,
19.0
],
[
553,
19.0
],
[
556,
18.0
],
[
560,
18.0
],
[
563,
18.0
],
[
566,
18.0
],
[
570,
18.0
],
[
573,
17.0
],
[
576,
17.0
],
[
579,
17.0
],
[
583,
17.0
],
[
586,
17.0
],
[
589,
17.0
],
[
593,
17.0
],
[
596,
16.0
],
[
599,
16.0
],
[
603,
16.0
],
[
606,
16.0
],
[
609,
16.0
],
[
612,
16.0
],
[
616,
16.0
],
[
619,
16.0
],
[
622,
16.0
],
[
626,
15.0
],
[
629,
15.0
],
[
632,
15.0
],
[
635,
15.0
],
[
639,
15.0
],
[
642,
15.0
],
[
645,
15.0
],
[
649,
15.0
],
[
652,
15.0
],
[
655,
15.0
],
[
659,
15.0
],
[
662,
14.000000000000002
],
[
665,
14.000000000000002
],
[
668,
14.000000000000002
],
[
672,
14.000000000000002
],
[
675,
14.000000000000002
],
[
678,
14.000000000000002
],
[
682,
14.000000000000002
],
[
685,
14.000000000000002
],
[
688,
14.000000000000002
],
[
691,
14.000000000000002
],
[
695,
14.000000000000002
],
[
698,
13.0
],
[
701,
13.0
],
[
705,
13.0
],
[
708,
13.0
],
[
711,
13.0
],
[
714,
13.0
],
[
718,
13.0
],
[
721,
13.0
],
[
724,
13.0
],
[
728,
13.0
],
[
731,
13.0
],
[
734,
13.0
],
[
738,
13.0
],
[
741,
13.0
],
[
744,
12.0
],
[
747,
12.0
],
[
751,
12.0
],
[
754,
12.0
],
[
757,
12.0
],
[
761,
12.0
],
[
764,
12.0
],
[
767,
12.0
],
[
770,
12.0
],
[
774,
12.0
],
[
777,
12.0
],
[
780,
12.0
],
[
784,
12.0
],
[
787,
12.0
],
[
790,
12.0
],
[
794,
12.0
],
[
797,
12.0
],
[
800,
12.0
],
[
803,
12.0
],
[
807,
12.0
],
[
810,
12.0
],
[
813,
12.0
],
[
817,
12.0
],
[
820,
12.0
],
[
823,
12.0
],
[
826,
12.0
],
[
830,
12.0
],
[
833,
12.0
],
[
836,
12.0
],
[
840,
11.0
],
[
843,
11.0
],
[
846,
11.0
],
[
849,
11.0
],
[
853,
11.0
],
[
856,
11.0
],
[
859,
11.0
],
[
863,
11.0
],
[
866,
11.0
],
[
869,
11.0
],
[
873,
11.0
],
[
876,
11.0
],
[
879,
11.0
],
[
882,
11.0
],
[
886,
11.0
],
[
889,
11.0
],
[
892,
11.0
],
[
896,
11.0
],
[
899,
11.0
],
[
902,
11.0
],
[
905,
11.0
],
[
909,
11.0
],
[
912,
11.0
],
[
915,
11.0
],
[
919,
11.0
],
[
922,
11.0
],
[
925,
11.0
],
[
929,
11.0
],
[
932,
11.0
],
[
935,
11.0
],
[
938,
11.0
],
[
942,
11.0
],
[
945,
11.0
],
[
948,
10.0
],
[
952,
10.0
],
[
955,
10.0
],
[
958,
10.0
],
[
961,
10.0
],
[
965,
10.0
],
[
968,
10.0
],
[
971,
10.0
],
[
975,
10.0
],
[
978,
10.0
],
[
981,
10.0
],
[
984,
10.0
],
[
988,
10.0
],
[
991,
10.0
],
[
994,
10.0
],
[
998,
10.0
],
[
1001,
10.0
],
[
1004,
10.0
],
[
1008,
10.0
],
[
1011,
10.0
],
[
1014,
10.0
],
[
1017,
10.0
],
[
1021,
10.0
],
[
1024,
10.0
],
[
1027,
10.0
],
[
1031,
10.0
],
[
1034,
10.0
],
[
1037,
10.0
],
[
1040,
10.0
],
[
1044,
10.0
],
[
1047,
10.0
],
[
1050,
10.0
],
[
1054,
10.0
],
[
1057,
9.0
],
[
1060,
9.0
],
[
1064,
9.0
],
[
1067,
9.0
],
[
1070,
9.0
],
[
1073,
9.0
],
[
1077,
9.0
],
[
1080,
9.0
],
[
1083,
9.0
],
[
1087,
9.0
],
[
1090,
9.0
],
[
1093,
9.0
],
[
1096,
9.0
],
[
1100,
9.0
],
[
1103,
9.0
],
[
1106,
9.0
],
[
1110,
9.0
],
[
1113,
9.0
],
[
1116,
9.0
],
[
1119,
9.0
],
[
1123,
9.0
],
[
1126,
9.0
],
[
1129,
9.0
],
[
1133,
9.0
],
[
1136,
9.0
],
[
1139,
8.0
],
[
1143,
8.0
],
[
1146,
8.0
],
[
1149,
8.0
],
[
1152,
8.0
],
[
1156,
8.0
],
[
1159,
8.0
],
[
1162,
8.0
],
[
1166,
8.0
],
[
1169,
8.0
],
[
1172,
8.0
],
[
1175,
8.0
],
[
1179,
8.0
],
[
1182,
8.0
],
[
1185,
8.0
],
[
1189,
8.0
],
[
1192,
8.0
],
[
1195,
8.0
],
[
1199,
8.0
],
[
1202,
8.0
],
[
1205,
8.0
],
[
1208,
8.0
],
[
1212,
8.0
],
[
1215,
8.0
],
[
1218,
7.000000000000001
],
[
1222,
7.000000000000001
],
[
1225,
7.000000000000001
],
[
1228,
7.000000000000001
],
[
1231,
7.000000000000001
],
[
1235,
7.000000000000001
],
[
1238,
7.000000000000001
],
[
1241,
7.000000000000001
],
[
1245,
7.000000000000001
],
[
1248,
7.000000000000001
],
[
1251,
7.000000000000001
],
[
1254,
7.000000000000001
],
[
1258,
7.000000000000001
],
[
1261,
7.000000000000001
],
[
1264,
7.000000000000001
],
[
1268,
7.000000000000001
],
[
1271,
7.000000000000001
],
[
1274,
7.000000000000001
],
[
1278,
7.000000000000001
],
[
1281,
7.000000000000001
],
[
1284,
7.000000000000001
],
[
1287,
7.000000000000001
],
[
1291,
7.000000000000001
],
[
1294,
7.000000000000001
],
[
1297,
6.0
],
[
1301,
6.0
],
[
1304,
6.0
],
[
1307,
6.0
],
[
1310,
6.0
],
[
1314,
6.0
],
[
1317,
6.0
],
[
1320,
6.0
],
[
1324,
6.0
],
[
1327,
6.0
],
[
1330,
6.0
],
[
1333,
6.0
],
[
1337,
6.0
],
[
1340,
6.0
],
[
1343,
6.0
],
[
1347,
6.0
],
[
1350,
6.0
],
[
1353,
6.0
],
[
1357,
5.0
],
[
1360,
5.0
],
[
1363,
5.0
],
[
1366,
5.0
],
[
1370,
5.0
],
[
1373,
5.0
],
[
1376,
5.0
],
[
1380,
5.0
],
[
1383,
5.0
],
[
1386,
5.0
],
[
1389,
5.0
],
[
1393,
5.0
],
[
1396,
5.0
],
[
1399,
5.0
],
[
1403,
5.0
],
[
1406,
5.0
],
[
1409,
5.0
],
[
1413,
4.0
],
[
1416,
4.0
],
[
1419,
4.0
],
[
1422,
4.0
],
[
1426,
4.0
],
[
1429,
4.0
],
[
1432,
4.0
],
[
1436,
4.0
],
[
1439,
4.0
],
[
1442,
4.0
],
[
1445,
4.0
],
[
1449,
4.0
],
[
1452,
4.0
],
[
1455,
4.0
],
[
1459,
3.0
],
[
1462,
3.0
],
[
1465,
3.0
],
[
1468,
3.0
],
[
1472,
3.0
],
[
1475,
3.0
],
[
1478,
3.0
],
[
1482,
3.0
],
[
1485,
3.0
],
[
1488,
3.0
],
[
1492,
3.0
],
[
1495,
3.0
],
[
1498,
3.0
],
[
1501,
3.0
],
[
1505,
3.0
],
[
1508,
3.0
],
[
1511,
2.0
],
[
1515,
2.0
],
[
1518,
2.0
],
[
1521,
2.0
],
[
1524,
2.0
],
[
1528,
2.0
],
[
1531,
2.0
],
[
1534,
2.0
],
[
1538,
2.0
],
[
1541,
2.0
],
[
1544,
2.0
],
[
1548,
2.0
],
[
1551,
2.0
],
[
1554,
2.0
],
[
1557,
2.0
],
[
1561,
2.0
],
[
1564,
2.0
],
[
1567,
1.0
],
[
1571,
1.0
],
[
1574,
1.0
],
[
1577,
1.0
],
[
1580,
1.0
],
[
1584,
1.0
],
[
1587,
1.0
],
[
1590,
1.0
],
[
1594,
1.0
],
[
1597,
1.0
],
[
1600,
1.0
],
[
1603,
1.0
],
[
1607,
1.0
],
[
1610,
1.0
],
[
1613,
1.0
],
[
1617,
1.0
],
[
1620,
1.0
],
[
1623,
1.0
],
[
1627,
1.0
],
[
1630,
1.0
],
[
1633,
1.0
],
[
1636,
1.0
],
[
1640,
1.0
],
[
1643,
1.0
]
],
"color": "rgba(67,67,72,1)",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null,
"extra_trace_params": {}
},
{
"name": "Sig_18_Blood",
"pairs": [
[
0,
100.0
],
[
4,
100.0
],
[
7,
100.0
],
[
11,
100.0
],
[
15,
100.0
],
[
19,
100.0
],
[
22,
100.0
],
[
26,
100.0
],
[
30,
100.0
],
[
34,
100.0
],
[
37,
100.0
],
[
41,
100.0
],
[
45,
100.0
],
[
48,
100.0
],
[
52,
99.0
],
[
56,
99.0
],
[
60,
99.0
],
[
63,
99.0
],
[
67,
99.0
],
[
71,
98.0
],
[
74,
98.0
],
[
78,
97.0
],
[
82,
97.0
],
[
86,
96.0
],
[
89,
95.0
],
[
93,
94.0
],
[
97,
93.0
],
[
101,
92.0
],
[
104,
91.0
],
[
108,
90.0
],
[
112,
88.0
],
[
115,
87.0
],
[
119,
85.0
],
[
123,
84.0
],
[
127,
82.0
],
[
130,
80.0
],
[
134,
79.0
],
[
138,
77.0
],
[
141,
75.0
],
[
145,
73.0
],
[
149,
71.0
],
[
153,
69.0
],
[
156,
68.0
],
[
160,
66.0
],
[
164,
64.0
],
[
168,
62.0
],
[
171,
61.0
],
[
175,
59.0
],
[
179,
56.99999999999999
],
[
182,
55.00000000000001
],
[
186,
54.0
],
[
190,
52.0
],
[
194,
50.0
],
[
197,
49.0
],
[
201,
47.0
],
[
205,
46.0
],
[
209,
44.0
],
[
212,
43.0
],
[
216,
41.0
],
[
220,
40.0
],
[
223,
39.0
],
[
227,
38.0
],
[
231,
36.0
],
[
235,
35.0
],
[
238,
34.0
],
[
242,
33.0
],
[
246,
32.0
],
[
249,
31.0
],
[
253,
30.0
],
[
257,
28.999999999999996
],
[
261,
28.000000000000004
],
[
264,
27.0
],
[
268,
26.0
],
[
272,
26.0
],
[
276,
25.0
],
[
279,
24.0
],
[
283,
24.0
],
[
287,
23.0
],
[
290,
22.0
],
[
294,
22.0
],
[
298,
21.0
],
[
302,
21.0
],
[
305,
20.0
],
[
309,
20.0
],
[
313,
19.0
],
[
316,
19.0
],
[
320,
19.0
],
[
324,
18.0
],
[
328,
18.0
],
[
331,
18.0
],
[
335,
18.0
],
[
339,
17.0
],
[
343,
17.0
],
[
346,
17.0
],
[
350,
17.0
],
[
354,
17.0
],
[
357,
16.0
],
[
361,
16.0
],
[
365,
16.0
],
[
369,
16.0
],
[
372,
16.0
],
[
376,
15.0
],
[
380,
15.0
],
[
384,
15.0
],
[
387,
15.0
],
[
391,
15.0
],
[
395,
15.0
],
[
398,
15.0
],
[
402,
15.0
],
[
406,
15.0
],
[
410,
14.000000000000002
],
[
413,
14.000000000000002
],
[
417,
14.000000000000002
],
[
421,
14.000000000000002
],
[
424,
14.000000000000002
],
[
428,
14.000000000000002
],
[
432,
14.000000000000002
],
[
436,
14.000000000000002
],
[
439,
14.000000000000002
],
[
443,
14.000000000000002
],
[
447,
14.000000000000002
],
[
451,
14.000000000000002
],
[
454,
14.000000000000002
],
[
458,
14.000000000000002
],
[
462,
14.000000000000002
],
[
465,
14.000000000000002
],
[
469,
14.000000000000002
],
[
473,
14.000000000000002
],
[
477,
14.000000000000002
],
[
480,
13.0
],
[
484,
13.0
],
[
488,
13.0
],
[
491,
13.0
],
[
495,
13.0
],
[
499,
13.0
],
[
503,
13.0
],
[
506,
13.0
],
[
510,
13.0
],
[
514,
13.0
],
[
518,
13.0
],
[
521,
13.0
],
[
525,
13.0
],
[
529,
13.0
],
[
532,
13.0
],
[
536,
13.0
],
[
540,
13.0
],
[
544,
13.0
],
[
547,
13.0
],
[
551,
13.0
],
[
555,
13.0
],
[
559,
13.0
],
[
562,
13.0
],
[
566,
13.0
],
[
570,
13.0
],
[
573,
13.0
],
[
577,
13.0
],
[
581,
13.0
],
[
585,
13.0
],
[
588,
13.0
],
[
592,
13.0
],
[
596,
13.0
],
[
599,
13.0
],
[
603,
12.0
],
[
607,
12.0
],
[
611,
12.0
],
[
614,
12.0
],
[
618,
12.0
],
[
622,
12.0
],
[
626,
12.0
],
[
629,
12.0
],
[
633,
12.0
],
[
637,
12.0
],
[
640,
12.0
],
[
644,
12.0
],
[
648,
12.0
],
[
652,
12.0
],
[
655,
12.0
],
[
659,
12.0
],
[
663,
12.0
],
[
666,
12.0
],
[
670,
12.0
],
[
674,
12.0
],
[
678,
12.0
],
[
681,
12.0
],
[
685,
12.0
],
[
689,
12.0
],
[
693,
12.0
],
[
696,
12.0
],
[
700,
12.0
],
[
704,
12.0
],
[
707,
12.0
],
[
711,
12.0
],
[
715,
12.0
],
[
719,
12.0
],
[
722,
12.0
],
[
726,
12.0
],
[
730,
12.0
],
[
734,
12.0
],
[
737,
12.0
],
[
741,
12.0
],
[
745,
12.0
],
[
748,
12.0
],
[
752,
12.0
],
[
756,
12.0
],
[
760,
12.0
],
[
763,
11.0
],
[
767,
11.0
],
[
771,
11.0
],
[
774,
11.0
],
[
778,
11.0
],
[
782,
11.0
],
[
786,
11.0
],
[
789,
11.0
],
[
793,
11.0
],
[
797,
11.0
],
[
801,
11.0
],
[
804,
11.0
],
[
808,
11.0
],
[
812,
11.0
],
[
815,
11.0
],
[
819,
11.0
],
[
823,
11.0
],
[
827,
11.0
],
[
830,
11.0
],
[
834,
11.0
],
[
838,
11.0
],
[
841,
11.0
],
[
845,
11.0
],
[
849,
11.0
],
[
853,
11.0
],
[
856,
11.0
],
[
860,
11.0
],
[
864,
11.0
],
[
868,
11.0
],
[
871,
11.0
],
[
875,
11.0
],
[
879,
11.0
],
[
882,
11.0
],
[
886,
11.0
],
[
890,
11.0
],
[
894,
11.0
],
[
897,
11.0
],
[
901,
11.0
],
[
905,
10.0
],
[
909,
10.0
],
[
912,
10.0
],
[
916,
10.0
],
[
920,
10.0
],
[
923,
10.0
],
[
927,
10.0
],
[
931,
10.0
],
[
935,
10.0
],
[
938,
10.0
],
[
942,
10.0
],
[
946,
10.0
],
[
949,
10.0
],
[
953,
10.0
],
[
957,
10.0
],
[
961,
10.0
],
[
964,
10.0
],
[
968,
10.0
],
[
972,
10.0
],
[
976,
10.0
],
[
979,
10.0
],
[
983,
10.0
],
[
987,
10.0
],
[
990,
10.0
],
[
994,
9.0
],
[
998,
9.0
],
[
1002,
9.0
],
[
1005,
9.0
],
[
1009,
9.0
],
[
1013,
9.0
],
[
1017,
9.0
],
[
1020,
9.0
],
[
1024,
9.0
],
[
1028,
9.0
],
[
1031,
9.0
],
[
1035,
9.0
],
[
1039,
9.0
],
[
1043,
9.0
],
[
1046,
9.0
],
[
1050,
9.0
],
[
1054,
9.0
],
[
1057,
9.0
],
[
1061,
9.0
],
[
1065,
9.0
],
[
1069,
9.0
],
[
1072,
9.0
],
[
1076,
9.0
],
[
1080,
9.0
],
[
1084,
9.0
],
[
1087,
9.0
],
[
1091,
9.0
],
[
1095,
9.0
],
[
1098,
9.0
],
[
1102,
8.0
],
[
1106,
8.0
],
[
1110,
8.0
],
[
1113,
8.0
],
[
1117,
8.0
],
[
1121,
8.0
],
[
1124,
8.0
],
[
1128,
8.0
],
[
1132,
8.0
],
[
1136,
8.0
],
[
1139,
8.0
],
[
1143,
8.0
],
[
1147,
8.0
],
[
1151,
8.0
],
[
1154,
8.0
],
[
1158,
8.0
],
[
1162,
8.0
],
[
1165,
8.0
],
[
1169,
8.0
],
[
1173,
8.0
],
[
1177,
8.0
],
[
1180,
8.0
],
[
1184,
8.0
],
[
1188,
8.0
],
[
1192,
8.0
],
[
1195,
8.0
],
[
1199,
8.0
],
[
1203,
8.0
],
[
1206,
8.0
],
[
1210,
8.0
],
[
1214,
8.0
],
[
1218,
8.0
],
[
1221,
8.0
],
[
1225,
7.000000000000001
],
[
1229,
7.000000000000001
],
[
1232,
7.000000000000001
],
[
1236,
7.000000000000001
],
[
1240,
7.000000000000001
],
[
1244,
7.000000000000001
],
[
1247,
7.000000000000001
],
[
1251,
7.000000000000001
],
[
1255,
7.000000000000001
],
[
1259,
7.000000000000001
],
[
1262,
7.000000000000001
],
[
1266,
7.000000000000001
],
[
1270,
7.000000000000001
],
[
1273,
7.000000000000001
],
[
1277,
7.000000000000001
],
[
1281,
7.000000000000001
],
[
1285,
7.000000000000001
],
[
1288,
7.000000000000001
],
[
1292,
7.000000000000001
],
[
1296,
7.000000000000001
],
[
1299,
7.000000000000001
],
[
1303,
7.000000000000001
],
[
1307,
7.000000000000001
],
[
1311,
7.000000000000001
],
[
1314,
7.000000000000001
],
[
1318,
6.0
],
[
1322,
6.0
],
[
1326,
6.0
],
[
1329,
6.0
],
[
1333,
6.0
],
[
1337,
6.0
],
[
1340,
6.0
],
[
1344,
6.0
],
[
1348,
6.0
],
[
1352,
6.0
],
[
1355,
6.0
],
[
1359,
6.0
],
[
1363,
6.0
],
[
1367,
6.0
],
[
1370,
6.0
],
[
1374,
6.0
],
[
1378,
6.0
],
[
1381,
6.0
],
[
1385,
6.0
],
[
1389,
6.0
],
[
1393,
5.0
],
[
1396,
5.0
],
[
1400,
5.0
],
[
1404,
5.0
],
[
1407,
5.0
],
[
1411,
5.0
],
[
1415,
5.0
],
[
1419,
5.0
],
[
1422,
5.0
],
[
1426,
5.0
],
[
1430,
5.0
],
[
1434,
5.0
],
[
1437,
5.0
],
[
1441,
5.0
],
[
1445,
5.0
],
[
1448,
5.0
],
[
1452,
5.0
],
[
1456,
5.0
],
[
1460,
5.0
],
[
1463,
4.0
],
[
1467,
4.0
],
[
1471,
4.0
],
[
1474,
4.0
],
[
1478,
4.0
],
[
1482,
4.0
],
[
1486,
4.0
],
[
1489,
4.0
],
[
1493,
4.0
],
[
1497,
4.0
],
[
1501,
4.0
],
[
1504,
4.0
],
[
1508,
4.0
],
[
1512,
4.0
],
[
1515,
4.0
],
[
1519,
4.0
],
[
1523,
4.0
],
[
1527,
4.0
],
[
1530,
4.0
],
[
1534,
4.0
],
[
1538,
3.0
],
[
1542,
3.0
],
[
1545,
3.0
],
[
1549,
3.0
],
[
1553,
3.0
],
[
1556,
3.0
],
[
1560,
3.0
],
[
1564,
3.0
],
[
1568,
3.0
],
[
1571,
3.0
],
[
1575,
3.0
],
[
1579,
3.0
],
[
1582,
3.0
],
[
1586,
3.0
],
[
1590,
3.0
],
[
1594,
3.0
],
[
1597,
3.0
],
[
1601,
3.0
],
[
1605,
2.0
],
[
1609,
2.0
],
[
1612,
2.0
],
[
1616,
2.0
],
[
1620,
2.0
],
[
1623,
2.0
],
[
1627,
2.0
],
[
1631,
2.0
],
[
1635,
2.0
],
[
1638,
2.0
],
[
1642,
2.0
],
[
1646,
2.0
],
[
1649,
2.0
],
[
1653,
2.0
],
[
1657,
2.0
],
[
1661,
2.0
],
[
1664,
2.0
],
[
1668,
2.0
],
[
1672,
2.0
],
[
1676,
2.0
],
[
1679,
2.0
],
[
1683,
2.0
],
[
1687,
2.0
],
[
1690,
1.0
],
[
1694,
1.0
],
[
1698,
1.0
],
[
1702,
1.0
],
[
1705,
1.0
],
[
1709,
1.0
],
[
1713,
1.0
],
[
1717,
1.0
],
[
1720,
1.0
],
[
1724,
1.0
],
[
1728,
1.0
],
[
1731,
1.0
],
[
1735,
1.0
],
[
1739,
1.0
],
[
1743,
1.0
],
[
1746,
1.0
],
[
1750,
1.0
],
[
1754,
1.0
],
[
1757,
1.0
],
[
1761,
1.0
],
[
1765,
1.0
],
[
1769,
1.0
],
[
1772,
1.0
],
[
1776,
1.0
],
[
1780,
1.0
],
[
1784,
1.0
],
[
1787,
1.0
],
[
1791,
1.0
],
[
1795,
1.0
],
[
1798,
1.0
],
[
1802,
1.0
],
[
1806,
1.0
],
[
1810,
1.0
],
[
1813,
1.0
],
[
1817,
1.0
],
[
1821,
1.0
],
[
1824,
1.0
],
[
1828,
1.0
],
[
1832,
1.0
],
[
1836,
1.0
],
[
1839,
1.0
],
[
1843,
1.0
],
[
1847,
1.0
],
[
1851,
1.0
],
[
1854,
1.0
],
[
1858,
1.0
]
],
"color": "rgba(144,237,125,1)",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null,
"extra_trace_params": {}
},
{
"name": "Sig_18_tissue",
"pairs": [
[
0,
100.0
],
[
11,
100.0
],
[
22,
100.0
],
[
34,
100.0
],
[
45,
100.0
],
[
56,
100.0
],
[
67,
100.0
],
[
79,
100.0
],
[
90,
100.0
],
[
101,
100.0
],
[
112,
100.0
],
[
124,
100.0
],
[
135,
100.0
],
[
146,
100.0
],
[
157,
100.0
],
[
168,
100.0
],
[
180,
99.0
],
[
191,
99.0
],
[
202,
99.0
],
[
213,
99.0
],
[
225,
99.0
],
[
236,
99.0
],
[
247,
98.0
],
[
258,
98.0
],
[
270,
98.0
],
[
281,
97.0
],
[
292,
97.0
],
[
303,
96.0
],
[
315,
96.0
],
[
326,
95.0
],
[
337,
95.0
],
[
348,
94.0
],
[
359,
93.0
],
[
371,
92.0
],
[
382,
91.0
],
[
393,
91.0
],
[
404,
90.0
],
[
416,
89.0
],
[
427,
88.0
],
[
438,
87.0
],
[
449,
86.0
],
[
461,
85.0
],
[
472,
84.0
],
[
483,
83.0
],
[
494,
82.0
],
[
505,
81.0
],
[
517,
80.0
],
[
528,
79.0
],
[
539,
78.0
],
[
550,
77.0
],
[
562,
76.0
],
[
573,
75.0
],
[
584,
74.0
],
[
595,
73.0
],
[
607,
72.0
],
[
618,
71.0
],
[
629,
70.0
],
[
640,
69.0
],
[
651,
68.0
],
[
663,
67.0
],
[
674,
66.0
],
[
685,
65.0
],
[
696,
64.0
],
[
708,
62.0
],
[
719,
61.0
],
[
730,
60.0
],
[
741,
59.0
],
[
753,
57.99999999999999
],
[
764,
56.99999999999999
],
[
775,
56.00000000000001
],
[
786,
55.00000000000001
],
[
798,
53.0
],
[
809,
52.0
],
[
820,
51.0
],
[
831,
50.0
],
[
842,
49.0
],
[
854,
48.0
],
[
865,
47.0
],
[
876,
46.0
],
[
887,
46.0
],
[
899,
45.0
],
[
910,
44.0
],
[
921,
43.0
],
[
932,
42.0
],
[
944,
41.0
],
[
955,
40.0
],
[
966,
39.0
],
[
977,
39.0
],
[
988,
38.0
],
[
1000,
37.0
],
[
1011,
36.0
],
[
1022,
36.0
],
[
1033,
35.0
],
[
1045,
34.0
],
[
1056,
34.0
],
[
1067,
33.0
],
[
1078,
32.0
],
[
1090,
32.0
],
[
1101,
31.0
],
[
1112,
30.0
],
[
1123,
30.0
],
[
1134,
28.999999999999996
],
[
1146,
28.999999999999996
],
[
1157,
28.000000000000004
],
[
1168,
28.000000000000004
],
[
1179,
27.0
],
[
1191,
27.0
],
[
1202,
26.0
],
[
1213,
26.0
],
[
1224,
25.0
],
[
1236,
25.0
],
[
1247,
25.0
],
[
1258,
24.0
],
[
1269,
24.0
],
[
1281,
23.0
],
[
1292,
23.0
],
[
1303,
23.0
],
[
1314,
22.0
],
[
1325,
22.0
],
[
1337,
22.0
],
[
1348,
21.0
],
[
1359,
21.0
],
[
1370,
21.0
],
[
1382,
20.0
],
[
1393,
20.0
],
[
1404,
20.0
],
[
1415,
20.0
],
[
1427,
19.0
],
[
1438,
19.0
],
[
1449,
19.0
],
[
1460,
19.0
],
[
1471,
18.0
],
[
1483,
18.0
],
[
1494,
18.0
],
[
1505,
18.0
],
[
1516,
18.0
],
[
1528,
17.0
],
[
1539,
17.0
],
[
1550,
17.0
],
[
1561,
17.0
],
[
1573,
17.0
],
[
1584,
17.0
],
[
1595,
16.0
],
[
1606,
16.0
],
[
1617,
16.0
],
[
1629,
16.0
],
[
1640,
16.0
],
[
1651,
16.0
],
[
1662,
16.0
],
[
1674,
15.0
],
[
1685,
15.0
],
[
1696,
15.0
],
[
1707,
15.0
],
[
1719,
15.0
],
[
1730,
15.0
],
[
1741,
15.0
],
[
1752,
15.0
],
[
1763,
15.0
],
[
1775,
15.0
],
[
1786,
15.0
],
[
1797,
14.000000000000002
],
[
1808,
14.000000000000002
],
[
1820,
14.000000000000002
],
[
1831,
14.000000000000002
],
[
1842,
14.000000000000002
],
[
1853,
14.000000000000002
],
[
1865,
14.000000000000002
],
[
1876,
14.000000000000002
],
[
1887,
14.000000000000002
],
[
1898,
14.000000000000002
],
[
1910,
14.000000000000002
],
[
1921,
14.000000000000002
],
[
1932,
14.000000000000002
],
[
1943,
14.000000000000002
],
[
1954,
14.000000000000002
],
[
1966,
13.0
],
[
1977,
13.0
],
[
1988,
13.0
],
[
1999,
13.0
],
[
2011,
13.0
],
[
2022,
13.0
],
[
2033,
13.0
],
[
2044,
13.0
],
[
2056,
13.0
],
[
2067,
13.0
],
[
2078,
13.0
],
[
2089,
13.0
],
[
2100,
13.0
],
[
2112,
13.0
],
[
2123,
13.0
],
[
2134,
13.0
],
[
2145,
13.0
],
[
2157,
13.0
],
[
2168,
13.0
],
[
2179,
13.0
],
[
2190,
13.0
],
[
2202,
13.0
],
[
2213,
12.0
],
[
2224,
12.0
],
[
2235,
12.0
],
[
2246,
12.0
],
[
2258,
12.0
],
[
2269,
12.0
],
[
2280,
12.0
],
[
2291,
12.0
],
[
2303,
12.0
],
[
2314,
12.0
],
[
2325,
12.0
],
[
2336,
12.0
],
[
2348,
12.0
],
[
2359,
12.0
],
[
2370,
12.0
],
[
2381,
12.0
],
[
2393,
12.0
],
[
2404,
12.0
],
[
2415,
12.0
],
[
2426,
12.0
],
[
2437,
11.0
],
[
2449,
11.0
],
[
2460,
11.0
],
[
2471,
11.0
],
[
2482,
11.0
],
[
2494,
11.0
],
[
2505,
11.0
],
[
2516,
11.0
],
[
2527,
11.0
],
[
2539,
11.0
],
[
2550,
11.0
],
[
2561,
11.0
],
[
2572,
11.0
],
[
2583,
11.0
],
[
2595,
11.0
],
[
2606,
11.0
],
[
2617,
11.0
],
[
2628,
11.0
],
[
2640,
11.0
],
[
2651,
11.0
],
[
2662,
11.0
],
[
2673,
11.0
],
[
2685,
11.0
],
[
2696,
10.0
],
[
2707,
10.0
],
[
2718,
10.0
],
[
2729,
10.0
],
[
2741,
10.0
],
[
2752,
10.0
],
[
2763,
10.0
],
[
2774,
10.0
],
[
2786,
10.0
],
[
2797,
10.0
],
[
2808,
10.0
],
[
2819,
10.0
],
[
2831,
10.0
],
[
2842,
10.0
],
[
2853,
10.0
],
[
2864,
10.0
],
[
2876,
10.0
],
[
2887,
10.0
],
[
2898,
10.0
],
[
2909,
10.0
],
[
2920,
10.0
],
[
2932,
10.0
],
[
2943,
10.0
],
[
2954,
10.0
],
[
2965,
10.0
],
[
2977,
9.0
],
[
2988,
9.0
],
[
2999,
9.0
],
[
3010,
9.0
],
[
3022,
9.0
],
[
3033,
9.0
],
[
3044,
9.0
],
[
3055,
9.0
],
[
3066,
9.0
],
[
3078,
9.0
],
[
3089,
9.0
],
[
3100,
9.0
],
[
3111,
9.0
],
[
3123,
9.0
],
[
3134,
9.0
],
[
3145,
9.0
],
[
3156,
9.0
],
[
3168,
9.0
],
[
3179,
9.0
],
[
3190,
9.0
],
[
3201,
9.0
],
[
3212,
9.0
],
[
3224,
9.0
],
[
3235,
9.0
],
[
3246,
9.0
],
[
3257,
9.0
],
[
3269,
9.0
],
[
3280,
9.0
],
[
3291,
9.0
],
[
3302,
8.0
],
[
3314,
8.0
],
[
3325,
8.0
],
[
3336,
8.0
],
[
3347,
8.0
],
[
3359,
8.0
],
[
3370,
8.0
],
[
3381,
8.0
],
[
3392,
8.0
],
[
3403,
8.0
],
[
3415,
8.0
],
[
3426,
8.0
],
[
3437,
8.0
],
[
3448,
8.0
],
[
3460,
8.0
],
[
3471,
8.0
],
[
3482,
8.0
],
[
3493,
8.0
],
[
3505,
8.0
],
[
3516,
8.0
],
[
3527,
8.0
],
[
3538,
8.0
],
[
3549,
8.0
],
[
3561,
8.0
],
[
3572,
8.0
],
[
3583,
8.0
],
[
3594,
8.0
],
[
3606,
8.0
],
[
3617,
8.0
],
[
3628,
8.0
],
[
3639,
8.0
],
[
3651,
8.0
],
[
3662,
7.000000000000001
],
[
3673,
7.000000000000001
],
[
3684,
7.000000000000001
],
[
3695,
7.000000000000001
],
[
3707,
7.000000000000001
],
[
3718,
7.000000000000001
],
[
3729,
7.000000000000001
],
[
3740,
7.000000000000001
],
[
3752,
7.000000000000001
],
[
3763,
7.000000000000001
],
[
3774,
7.000000000000001
],
[
3785,
7.000000000000001
],
[
3797,
7.000000000000001
],
[
3808,
7.000000000000001
],
[
3819,
7.000000000000001
],
[
3830,
7.000000000000001
],
[
3842,
7.000000000000001
],
[
3853,
7.000000000000001
],
[
3864,
7.000000000000001
],
[
3875,
7.000000000000001
],
[
3886,
7.000000000000001
],
[
3898,
7.000000000000001
],
[
3909,
7.000000000000001
],
[
3920,
6.0
],
[
3931,
6.0
],
[
3943,
6.0
],
[
3954,
6.0
],
[
3965,
6.0
],
[
3976,
6.0
],
[
3988,
6.0
],
[
3999,
6.0
],
[
4010,
6.0
],
[
4021,
6.0
],
[
4032,
6.0
],
[
4044,
6.0
],
[
4055,
6.0
],
[
4066,
6.0
],
[
4077,
6.0
],
[
4089,
6.0
],
[
4100,
6.0
],
[
4111,
6.0
],
[
4122,
6.0
],
[
4134,
6.0
],
[
4145,
6.0
],
[
4156,
6.0
],
[
4167,
6.0
],
[
4178,
6.0
],
[
4190,
6.0
],
[
4201,
6.0
],
[
4212,
5.0
],
[
4223,
5.0
],
[
4235,
5.0
],
[
4246,
5.0
],
[
4257,
5.0
],
[
4268,
5.0
],
[
4280,
5.0
],
[
4291,
5.0
],
[
4302,
5.0
],
[
4313,
5.0
],
[
4324,
5.0
],
[
4336,
5.0
],
[
4347,
5.0
],
[
4358,
5.0
],
[
4369,
5.0
],
[
4381,
5.0
],
[
4392,
5.0
],
[
4403,
5.0
],
[
4414,
5.0
],
[
4426,
5.0
],
[
4437,
5.0
],
[
4448,
5.0
],
[
4459,
5.0
],
[
4471,
5.0
],
[
4482,
5.0
],
[
4493,
5.0
],
[
4504,
5.0
],
[
4515,
5.0
],
[
4527,
4.0
],
[
4538,
4.0
],
[
4549,
4.0
],
[
4560,
4.0
],
[
4572,
4.0
],
[
4583,
4.0
],
[
4594,
4.0
],
[
4605,
4.0
],
[
4617,
4.0
],
[
4628,
4.0
],
[
4639,
4.0
],
[
4650,
4.0
],
[
4661,
4.0
],
[
4673,
4.0
],
[
4684,
4.0
],
[
4695,
4.0
],
[
4706,
4.0
],
[
4718,
4.0
],
[
4729,
4.0
],
[
4740,
4.0
],
[
4751,
4.0
],
[
4763,
4.0
],
[
4774,
3.0
],
[
4785,
3.0
],
[
4796,
3.0
],
[
4807,
3.0
],
[
4819,
3.0
],
[
4830,
3.0
],
[
4841,
3.0
],
[
4852,
3.0
],
[
4864,
3.0
],
[
4875,
3.0
],
[
4886,
3.0
],
[
4897,
3.0
],
[
4909,
3.0
],
[
4920,
3.0
],
[
4931,
3.0
],
[
4942,
3.0
],
[
4954,
3.0
],
[
4965,
3.0
],
[
4976,
3.0
],
[
4987,
3.0
],
[
4998,
3.0
],
[
5010,
3.0
],
[
5021,
2.0
],
[
5032,
2.0
],
[
5043,
2.0
],
[
5055,
2.0
],
[
5066,
2.0
],
[
5077,
2.0
],
[
5088,
2.0
],
[
5100,
2.0
],
[
5111,
2.0
],
[
5122,
2.0
],
[
5133,
2.0
],
[
5144,
2.0
],
[
5156,
2.0
],
[
5167,
2.0
],
[
5178,
2.0
],
[
5189,
2.0
],
[
5201,
2.0
],
[
5212,
2.0
],
[
5223,
2.0
],
[
5234,
2.0
],
[
5246,
2.0
],
[
5257,
2.0
]
],
"color": "rgba(247,163,92,1)",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null,
"extra_trace_params": {}
}
]
}
],
"pconfig": {
"id": "mosdepth-cumcoverage-dist-id",
"title": "Mosdepth: Cumulative coverage distribution",
"subtitle": null,
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": "Cumulative Coverage (X)",
"ylab": "% bases in genome/regions covered by at least X reads",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": "{point.x}X: {point.y:.2f}%",
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": 0,
"xmax": 5257,
"ymin": 0,
"ymax": 100,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"series_label": "samples",
"flat_if_very_large": true,
"categories": false,
"smooth_points": 500,
"smooth_points_sumcounts": null,
"extra_series": null,
"style": null,
"hide_empty": true,
"colors": {},
"dash_styles": {},
"hovertemplates": {},
"legend_groups": {},
"axis_controlled_by_switches": null
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"yaxis"
],
"square": false,
"flat": false,
"defer_render": false,
"section_anchor": null,
"module_anchor": null,
"sample_names": [
"HCC1395_BL",
"HCC1395_tumor",
"Sig_18_Blood",
"Sig_18_tissue"
]
},
"mosdepth-coverage-per-contig-single": {
"id": "mosdepth-coverage-per-contig-single",
"anchor": "mosdepth-coverage-per-contig-single",
"plot_type": "bar plot",
"layout": {
"autosize": true,
"height": 300,
"hoverlabel": {
"namelength": -1,
"bgcolor": "white",
"font": {
"color": "rgba(60,60,60,1)"
}
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"showlegend": true,
"template": {
"layout": {
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"color": "rgba(60,60,60,1)",
"family": "system-ui, -apple-system, 'Segoe UI', Roboto, 'Helvetica Neue', 'Noto Sans', 'Liberation Sans', Arial, sans-serif, 'Apple Color Emoji', 'Segoe UI Emoji', 'Segoe UI Symbol', 'Noto Color Emoji'"
},
"legend": {
"font": {
"color": "rgba(60,60,60,1)"
}
},
"modebar": {
"activecolor": "rgba(80, 80, 80, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(100, 100, 100, 0.5)"
},
"paper_bgcolor": "rgba(0,0,0,0)",
"plot_bgcolor": "rgba(0,0,0,0)",
"title": {
"font": {
"color": "rgba(60,60,60,1)",
"size": 20
}
},
"xaxis": {
"color": "rgba(100,100,100,1)",
"gridcolor": "rgba(128,128,128,0.15)",
"spikecolor": "rgba(60,60,60,1)",
"spikethickness": -3,
"tickfont": {
"color": "rgba(80,80,80,1)",
"size": 10
},
"zerolinecolor": "rgba(128,128,128,0.2)"
},
"yaxis": {
"color": "rgba(100,100,100,1)",
"gridcolor": "rgba(128,128,128,0.15)",
"spikecolor": "rgba(60,60,60,1)",
"spikethickness": -3,
"tickfont": {
"color": "rgba(80,80,80,1)",
"size": 10
},
"zerolinecolor": "rgba(128,128,128,0.2)"
}
}
},
"title": {
"text": "Mosdepth: Coverage per contig",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true
},
"yaxis": {
"automargin": true,
"showgrid": false,
"categoryorder": "trace",
"type": "category"
},
"barmode": "relative",
"bargroupgap": 0,
"bargap": 0.2,
"legend": {
"tracegroupgap": 0,
"traceorder": "normal"
},
"hovermode": "y unified"
},
"datasets": [
{
"plot_id": "mosdepth-coverage-per-contig-single",
"label": "1",
"uid": "mosdepth-coverage-per-contig-single",
"dconfig": {
"title": "Mosdepth: Coverage per contig",
"subtitle": "4 bars"
},
"layout": {
"title": {
"text": "Mosdepth: Coverage per contig
4 bars"
},
"xaxis": {
"title": {
"text": "Average Coverage"
},
"hoverformat": ",.2f",
"ticksuffix": "x",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": 1217.770000000001
}
},
"yaxis": {
"title": null,
"hoverformat": null,
"ticksuffix": "",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
},
"showlegend": false
},
"trace_params": {
"hovertemplate": "%{meta}: %{x}",
"orientation": "h",
"marker": {
"line": {
"width": 0
}
},
"textposition": "inside",
"insidetextanchor": "start"
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_series": 4,
"cats": [
{
"name": "chr21",
"color": "rgba(124,181,236,1)",
"data": [
1217.770000000001,
330.810000000001,
442.71000000000043,
231.24000000000012
],
"data_pct": [
100.0,
100.0,
100.0,
100.0
]
}
],
"samples": [
"Sig_18_tissue",
"Sig_18_Blood",
"HCC1395_tumor",
"HCC1395_BL"
],
"cats_clustered": null,
"samples_clustered": null,
"group_labels": null,
"offset_groups": null
}
],
"pconfig": {
"id": "mosdepth-coverage-per-contig-single",
"title": "Mosdepth: Coverage per contig",
"subtitle": null,
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": "Sample",
"ylab": "Average Coverage",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": "x",
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"series_label": "samples",
"flat_if_very_large": true,
"stacking": "relative",
"hide_empty": null,
"hide_zero_cats": false,
"sort_samples": true,
"cluster_samples": false,
"cluster_method": "complete",
"cluster_switch_clustered_active": true,
"use_legend": null,
"suffix": null,
"lab_format": null,
"sample_groups": null
},
"add_log_tab": false,
"add_pct_tab": true,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"xaxis"
],
"square": false,
"flat": false,
"defer_render": false,
"section_anchor": null,
"module_anchor": null,
"sort_switch_sorted_active": false,
"cluster_switch_clustered_active": true
},
"general_stats_table": {
"id": "general_stats_table",
"anchor": "general_stats_table",
"plot_type": "violin plot",
"layout": {
"autosize": true,
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 40,
"l": 60,
"pad": 0,
"r": 15,
"t": 50
},
"showlegend": false,
"template": {
"layout": {
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"color": "rgba(60,60,60,1)",
"family": "system-ui, -apple-system, 'Segoe UI', Roboto, 'Helvetica Neue', 'Noto Sans', 'Liberation Sans', Arial, sans-serif, 'Apple Color Emoji', 'Segoe UI Emoji', 'Segoe UI Symbol', 'Noto Color Emoji'"
},
"legend": {
"font": {
"color": "rgba(60,60,60,1)"
}
},
"modebar": {
"activecolor": "rgba(80, 80, 80, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(100, 100, 100, 0.5)"
},
"paper_bgcolor": "rgba(0,0,0,0)",
"plot_bgcolor": "rgba(0,0,0,0)",
"title": {
"font": {
"color": "rgba(60,60,60,1)",
"size": 20
}
},
"xaxis": {
"color": "rgba(100,100,100,1)",
"gridcolor": "rgba(128,128,128,0.15)",
"spikecolor": "rgba(60,60,60,1)",
"spikethickness": -3,
"tickfont": {
"color": "rgba(80,80,80,1)",
"size": 10
},
"zerolinecolor": "rgba(128,128,128,0.2)"
},
"yaxis": {
"color": "rgba(100,100,100,1)",
"gridcolor": "rgba(128,128,128,0.15)",
"spikecolor": "rgba(60,60,60,1)",
"spikethickness": -3,
"tickfont": {
"color": "rgba(80,80,80,1)",
"size": 10
},
"zerolinecolor": "rgba(128,128,128,0.2)"
}
}
},
"title": {
"text": "General Statistics",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": false,
"tickfont": {
"size": 9,
"color": "rgba(0,0,0,0.5)"
},
"gridcolor": "rgba(0,0,0,0.1)",
"zerolinecolor": "rgba(0,0,0,0.1)"
},
"yaxis": {
"automargin": true,
"tickfont": {
"size": 9,
"color": "rgba(0,0,0,0.5)"
},
"gridcolor": "rgba(0,0,0,0.1)",
"zerolinecolor": "rgba(0,0,0,0.1)"
},
"violingap": 0,
"grid": {
"columns": 1,
"roworder": "top to bottom",
"ygap": 0.4
}
},
"datasets": [
{
"plot_id": "general_stats_table",
"label": "1",
"uid": "general_stats_table",
"dconfig": {
"ylab": "",
"title": "General Statistics",
"subtitle": "4 samples"
},
"layout": {
"title": {
"text": "General Statistics
4 samples"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": null
},
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": ""
},
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
}
},
"trace_params": {
"hovertemplate": "%{text}: %{x}",
"orientation": "h",
"box": {
"visible": true
},
"meanline": {
"visible": true
},
"fillcolor": "#999999",
"line": {
"width": 0
},
"opacity": 1,
"points": false,
"hoveron": "points"
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_series": 4,
"metrics": [
"samtools_flagstat_stats-error_rate",
"samtools_flagstat_stats-non_primary_alignments",
"samtools_flagstat_stats-reads_mapped",
"samtools_flagstat_stats-reads_mapped_percent",
"samtools_flagstat_stats-reads_properly_paired_percent",
"samtools_flagstat_stats-reads_MQ0_percent",
"samtools_flagstat_stats-raw_total_sequences",
"samtools_flagstat_stats-insert_size_average",
"mosdepth-1_x_pc",
"mosdepth-5_x_pc",
"mosdepth-10_x_pc",
"mosdepth-30_x_pc",
"mosdepth-50_x_pc",
"mosdepth-median_coverage"
],
"header_by_metric": {
"samtools_flagstat_stats-error_rate": {
"title": "Error rate",
"description": "Error rate: mismatches (NM) / bases mapped (CIGAR)",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": false,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Samtools Flagstat: stats",
"color": "55,126,184",
"hoverformat": ".2f"
},
"samtools_flagstat_stats-non_primary_alignments": {
"title": "Non-primary",
"description": "Non-primary alignments (millions)",
"suffix": " M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": " M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Samtools Flagstat: stats",
"color": "55,126,184",
"hoverformat": ".2f"
},
"samtools_flagstat_stats-reads_mapped": {
"title": "Reads mapped",
"description": "Reads mapped in the bam file (millions)",
"suffix": " M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": " M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Samtools Flagstat: stats",
"color": "55,126,184",
"hoverformat": ".2f"
},
"samtools_flagstat_stats-reads_mapped_percent": {
"title": "% Mapped",
"description": "% Mapped reads",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": false,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Samtools Flagstat: stats",
"color": "55,126,184",
"hoverformat": ".2f"
},
"samtools_flagstat_stats-reads_properly_paired_percent": {
"title": "% Proper pairs",
"description": "% Properly paired reads",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": false,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Samtools Flagstat: stats",
"color": "55,126,184",
"hoverformat": ".2f"
},
"samtools_flagstat_stats-reads_MQ0_percent": {
"title": "% MapQ 0 reads",
"description": "% of reads that are ambiguously placed (MapQ=0)",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": true,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Samtools Flagstat: stats",
"color": "55,126,184",
"hoverformat": ".2f"
},
"samtools_flagstat_stats-raw_total_sequences": {
"title": "Total seqs",
"description": "Total sequences in the bam file (millions)",
"suffix": " M",
"dmin": 0.0,
"dmax": 9.108467,
"hidden": false,
"xaxis": {
"ticksuffix": " M",
"tickvals": null,
"range": [
-0.045542334999999996,
9.154237046675
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Samtools Flagstat: stats",
"color": "55,126,184",
"hoverformat": ".2f"
},
"samtools_flagstat_stats-insert_size_average": {
"title": "Mean insert",
"description": "Average insert size",
"suffix": "bp",
"dmin": 0,
"dmax": 291.0,
"hidden": true,
"xaxis": {
"ticksuffix": "bp",
"tickvals": null,
"range": [
-1.455,
292.462275
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Samtools Flagstat: stats",
"color": "55,126,184",
"hoverformat": ".2f"
},
"mosdepth-1_x_pc": {
"title": "≥ 1X",
"description": "Fraction of genome with at least 1X coverage",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": true,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Mosdepth",
"color": "77,175,74",
"hoverformat": ".2f"
},
"mosdepth-5_x_pc": {
"title": "≥ 5X",
"description": "Fraction of genome with at least 5X coverage",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": true,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Mosdepth",
"color": "77,175,74",
"hoverformat": ".2f"
},
"mosdepth-10_x_pc": {
"title": "≥ 10X",
"description": "Fraction of genome with at least 10X coverage",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": true,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Mosdepth",
"color": "77,175,74",
"hoverformat": ".2f"
},
"mosdepth-30_x_pc": {
"title": "≥ 30X",
"description": "Fraction of genome with at least 30X coverage",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": false,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Mosdepth",
"color": "77,175,74",
"hoverformat": ".2f"
},
"mosdepth-50_x_pc": {
"title": "≥ 50X",
"description": "Fraction of genome with at least 50X coverage",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": true,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Mosdepth",
"color": "77,175,74",
"hoverformat": ".2f"
},
"mosdepth-median_coverage": {
"title": "Median",
"description": "Median coverage",
"suffix": "X",
"dmin": 0.0,
"dmax": 839,
"hidden": false,
"xaxis": {
"ticksuffix": "X",
"tickvals": null,
"range": [
-4.195,
843.215975
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "Mosdepth",
"color": "77,175,74",
"hoverformat": null
}
},
"violin_value_by_sample_by_metric": {
"samtools_flagstat_stats-error_rate": {
"HCC1395_BL": 0.356765,
"HCC1395_tumor": 0.362003,
"Sig_18_Blood": 0.3767457,
"Sig_18_tissue": 0.3583898
},
"samtools_flagstat_stats-non_primary_alignments": {
"HCC1395_BL": 0.0,
"HCC1395_tumor": 0.0,
"Sig_18_Blood": 0.0,
"Sig_18_tissue": 0.0
},
"samtools_flagstat_stats-reads_mapped": {
"HCC1395_BL": 1.322751,
"HCC1395_tumor": 3.617921,
"Sig_18_Blood": 1.685328,
"Sig_18_tissue": 9.108433
},
"samtools_flagstat_stats-reads_mapped_percent": {
"HCC1395_BL": 99.99954640194684,
"HCC1395_tumor": 99.99977887902168,
"Sig_18_Blood": 99.99976265804008,
"Sig_18_tissue": 99.99962672093999
},
"samtools_flagstat_stats-reads_properly_paired_percent": {
"HCC1395_BL": 99.96991132914057,
"HCC1395_tumor": 99.9660302897044,
"Sig_18_Blood": 99.97911390752682,
"Sig_18_tissue": 99.95612873165155
},
"samtools_flagstat_stats-reads_MQ0_percent": {
"HCC1395_BL": 7.908179658092908,
"HCC1395_tumor": 7.73320869480855,
"Sig_18_Blood": 7.44470525688707,
"Sig_18_tissue": 6.856982629458942
},
"samtools_flagstat_stats-raw_total_sequences": {
"HCC1395_BL": 1.322757,
"HCC1395_tumor": 3.6179289999999997,
"Sig_18_Blood": 1.6853319999999998,
"Sig_18_tissue": 9.108467
},
"samtools_flagstat_stats-insert_size_average": {
"HCC1395_BL": 283.6,
"HCC1395_tumor": 273.5,
"Sig_18_Blood": 291.0,
"Sig_18_tissue": 230.1
},
"mosdepth-1_x_pc": {
"HCC1395_BL": 100.0,
"HCC1395_tumor": 100.0,
"Sig_18_Blood": 100.0,
"Sig_18_tissue": 100.0
},
"mosdepth-5_x_pc": {
"HCC1395_BL": 100.0,
"HCC1395_tumor": 100.0,
"Sig_18_Blood": 100.0,
"Sig_18_tissue": 100.0
},
"mosdepth-10_x_pc": {
"HCC1395_BL": 100.0,
"HCC1395_tumor": 100.0,
"Sig_18_Blood": 100.0,
"Sig_18_tissue": 100.0
},
"mosdepth-30_x_pc": {
"HCC1395_BL": 100.0,
"HCC1395_tumor": 100.0,
"Sig_18_Blood": 100.0,
"Sig_18_tissue": 100.0
},
"mosdepth-50_x_pc": {
"HCC1395_BL": 99.0,
"HCC1395_tumor": 100.0,
"Sig_18_Blood": 99.0,
"Sig_18_tissue": 100.0
},
"mosdepth-median_coverage": {
"HCC1395_BL": 149,
"HCC1395_tumor": 334,
"Sig_18_Blood": 195,
"Sig_18_tissue": 839
}
},
"scatter_value_by_sample_by_metric": {
"samtools_flagstat_stats-error_rate": {},
"samtools_flagstat_stats-non_primary_alignments": {},
"samtools_flagstat_stats-reads_mapped": {},
"samtools_flagstat_stats-reads_mapped_percent": {},
"samtools_flagstat_stats-reads_properly_paired_percent": {},
"samtools_flagstat_stats-reads_MQ0_percent": {},
"samtools_flagstat_stats-raw_total_sequences": {},
"samtools_flagstat_stats-insert_size_average": {},
"mosdepth-1_x_pc": {},
"mosdepth-5_x_pc": {},
"mosdepth-10_x_pc": {},
"mosdepth-30_x_pc": {},
"mosdepth-50_x_pc": {},
"mosdepth-median_coverage": {}
},
"all_samples": [
"HCC1395_BL",
"HCC1395_tumor",
"Sig_18_Blood",
"Sig_18_tissue"
],
"scatter_trace_params": {
"mode": "markers",
"marker": {
"size": 4,
"color": "#000000",
"opacity": 1
},
"showlegend": false,
"hovertemplate": "%{text}: %{x}",
"hoverlabel": {
"bgcolor": "white",
"font": {
"color": "rgba(60,60,60,1)"
}
}
},
"dt": {
"id": "general_stats_table",
"anchor": "general_stats_table_table",
"pconfig": {
"id": "general_stats_table",
"title": "General Statistics",
"subtitle": null,
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": null,
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"series_label": "samples",
"flat_if_very_large": false,
"namespace": "",
"save_file": true,
"raw_data_fn": "multiqc_general_stats",
"defaultsort": null,
"sortRows": true,
"sort_rows": true,
"only_defined_headers": true,
"col1_header": "Sample Name",
"no_beeswarm": false,
"no_violin": false,
"scale": "GnBu",
"min": null,
"parse_numeric": true,
"rows_are_samples": true
},
"section_by_id": {
"samtools": {
"column_by_key": {
"error_rate": {
"rid": "samtools_flagstat_stats-error_rate",
"clean_rid": "samtools_flagstat_stats-error_rate",
"title": "Error rate",
"description": "Error rate: mismatches (NM) / bases mapped (CIGAR)",
"scale": "OrRd",
"hidden": false,
"placement": 1000.0,
"namespace": "Samtools Flagstat: stats",
"colour": null,
"color": "55,126,184",
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": "{:,.2f}"
},
"non-primary_alignments": {
"rid": "samtools_flagstat_stats-non_primary_alignments",
"clean_rid": "samtools_flagstat_stats-non_primary_alignments",
"title": "Non-primary",
"description": "Non-primary alignments (millions)",
"scale": "PuBu",
"hidden": false,
"placement": 1000.0,
"namespace": "Samtools Flagstat: stats",
"colour": null,
"color": "55,126,184",
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": null,
"suffix": " M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"reads_mapped": {
"rid": "samtools_flagstat_stats-reads_mapped",
"clean_rid": "samtools_flagstat_stats-reads_mapped",
"title": "Reads mapped",
"description": "Reads mapped in the bam file (millions)",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "Samtools Flagstat: stats",
"colour": null,
"color": "55,126,184",
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": null,
"suffix": " M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"reads_mapped_percent": {
"rid": "samtools_flagstat_stats-reads_mapped_percent",
"clean_rid": "samtools_flagstat_stats-reads_mapped_percent",
"title": "% Mapped",
"description": "% Mapped reads",
"scale": "RdYlGn",
"hidden": false,
"placement": 1000.0,
"namespace": "Samtools Flagstat: stats",
"colour": null,
"color": "55,126,184",
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"reads_properly_paired_percent": {
"rid": "samtools_flagstat_stats-reads_properly_paired_percent",
"clean_rid": "samtools_flagstat_stats-reads_properly_paired_percent",
"title": "% Proper pairs",
"description": "% Properly paired reads",
"scale": "RdYlGn",
"hidden": false,
"placement": 1000.0,
"namespace": "Samtools Flagstat: stats",
"colour": null,
"color": "55,126,184",
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"reads_MQ0_percent": {
"rid": "samtools_flagstat_stats-reads_MQ0_percent",
"clean_rid": "samtools_flagstat_stats-reads_MQ0_percent",
"title": "% MapQ 0 reads",
"description": "% of reads that are ambiguously placed (MapQ=0)",
"scale": "OrRd",
"hidden": true,
"placement": 1000.0,
"namespace": "Samtools Flagstat: stats",
"colour": null,
"color": "55,126,184",
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"raw_total_sequences": {
"rid": "samtools_flagstat_stats-raw_total_sequences",
"clean_rid": "samtools_flagstat_stats-raw_total_sequences",
"title": "Total seqs",
"description": "Total sequences in the bam file (millions)",
"scale": "GnBu",
"hidden": false,
"placement": 1000.0,
"namespace": "Samtools Flagstat: stats",
"colour": null,
"color": "55,126,184",
"max": null,
"dmax": 9.108467,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": "read_count",
"tt_decimals": null,
"suffix": " M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"insert_size_average": {
"rid": "samtools_flagstat_stats-insert_size_average",
"clean_rid": "samtools_flagstat_stats-insert_size_average",
"title": "Mean insert",
"description": "Average insert size",
"scale": "Oranges",
"hidden": true,
"placement": 1000.0,
"namespace": "Samtools Flagstat: stats",
"colour": null,
"color": "55,126,184",
"max": null,
"dmax": 291.0,
"min": null,
"dmin": 0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "bp",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": "{:,.1f}"
}
},
"rows_by_sgroup": {
"HCC1395_BL": [
{
"sample": "HCC1395_BL",
"data": {
"raw_total_sequences": {
"raw": 1322757.0,
"mod": 1.322757,
"fmt": "1.3"
},
"reads_mapped": {
"raw": 1322751.0,
"mod": 1.322751,
"fmt": "1.3"
},
"non-primary_alignments": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"error_rate": {
"raw": 0.00356765,
"mod": 0.356765,
"fmt": "0.36"
},
"insert_size_average": {
"raw": 283.6,
"mod": 283.6,
"fmt": "283.6"
},
"reads_mapped_percent": {
"raw": 99.99954640194684,
"mod": 99.99954640194684,
"fmt": "100.0"
},
"reads_properly_paired_percent": {
"raw": 99.96991132914057,
"mod": 99.96991132914057,
"fmt": "100.0"
},
"reads_MQ0_percent": {
"raw": 7.908179658092908,
"mod": 7.908179658092908,
"fmt": "7.9"
}
}
}
],
"HCC1395_tumor": [
{
"sample": "HCC1395_tumor",
"data": {
"raw_total_sequences": {
"raw": 3617929.0,
"mod": 3.6179289999999997,
"fmt": "3.6"
},
"reads_mapped": {
"raw": 3617921.0,
"mod": 3.617921,
"fmt": "3.6"
},
"non-primary_alignments": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"error_rate": {
"raw": 0.00362003,
"mod": 0.362003,
"fmt": "0.36"
},
"insert_size_average": {
"raw": 273.5,
"mod": 273.5,
"fmt": "273.5"
},
"reads_mapped_percent": {
"raw": 99.99977887902168,
"mod": 99.99977887902168,
"fmt": "100.0"
},
"reads_properly_paired_percent": {
"raw": 99.9660302897044,
"mod": 99.9660302897044,
"fmt": "100.0"
},
"reads_MQ0_percent": {
"raw": 7.73320869480855,
"mod": 7.73320869480855,
"fmt": "7.7"
}
}
}
],
"Sig_18_Blood": [
{
"sample": "Sig_18_Blood",
"data": {
"raw_total_sequences": {
"raw": 1685332.0,
"mod": 1.6853319999999998,
"fmt": "1.7"
},
"reads_mapped": {
"raw": 1685328.0,
"mod": 1.685328,
"fmt": "1.7"
},
"non-primary_alignments": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"error_rate": {
"raw": 0.003767457,
"mod": 0.3767457,
"fmt": "0.38"
},
"insert_size_average": {
"raw": 291.0,
"mod": 291.0,
"fmt": "291.0"
},
"reads_mapped_percent": {
"raw": 99.99976265804008,
"mod": 99.99976265804008,
"fmt": "100.0"
},
"reads_properly_paired_percent": {
"raw": 99.97911390752682,
"mod": 99.97911390752682,
"fmt": "100.0"
},
"reads_MQ0_percent": {
"raw": 7.44470525688707,
"mod": 7.44470525688707,
"fmt": "7.4"
}
}
}
],
"Sig_18_tissue": [
{
"sample": "Sig_18_tissue",
"data": {
"raw_total_sequences": {
"raw": 9108467.0,
"mod": 9.108467,
"fmt": "9.1"
},
"reads_mapped": {
"raw": 9108433.0,
"mod": 9.108433,
"fmt": "9.1"
},
"non-primary_alignments": {
"raw": 0.0,
"mod": 0.0,
"fmt": "0.0"
},
"error_rate": {
"raw": 0.003583898,
"mod": 0.3583898,
"fmt": "0.36"
},
"insert_size_average": {
"raw": 230.1,
"mod": 230.1,
"fmt": "230.1"
},
"reads_mapped_percent": {
"raw": 99.99962672093999,
"mod": 99.99962672093999,
"fmt": "100.0"
},
"reads_properly_paired_percent": {
"raw": 99.95612873165155,
"mod": 99.95612873165155,
"fmt": "100.0"
},
"reads_MQ0_percent": {
"raw": 6.856982629458942,
"mod": 6.856982629458942,
"fmt": "6.9"
}
}
}
]
}
},
"mosdepth": {
"column_by_key": {
"1_x_pc": {
"rid": "mosdepth-1_x_pc",
"clean_rid": "mosdepth-1_x_pc",
"title": "≥ 1X",
"description": "Fraction of genome with at least 1X coverage",
"scale": "RdYlGn",
"hidden": true,
"placement": 1000.0,
"namespace": "Mosdepth",
"colour": null,
"color": "77,175,74",
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"5_x_pc": {
"rid": "mosdepth-5_x_pc",
"clean_rid": "mosdepth-5_x_pc",
"title": "≥ 5X",
"description": "Fraction of genome with at least 5X coverage",
"scale": "RdYlGn",
"hidden": true,
"placement": 1000.0,
"namespace": "Mosdepth",
"colour": null,
"color": "77,175,74",
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"10_x_pc": {
"rid": "mosdepth-10_x_pc",
"clean_rid": "mosdepth-10_x_pc",
"title": "≥ 10X",
"description": "Fraction of genome with at least 10X coverage",
"scale": "RdYlGn",
"hidden": true,
"placement": 1000.0,
"namespace": "Mosdepth",
"colour": null,
"color": "77,175,74",
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"30_x_pc": {
"rid": "mosdepth-30_x_pc",
"clean_rid": "mosdepth-30_x_pc",
"title": "≥ 30X",
"description": "Fraction of genome with at least 30X coverage",
"scale": "RdYlGn",
"hidden": false,
"placement": 1000.0,
"namespace": "Mosdepth",
"colour": null,
"color": "77,175,74",
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"50_x_pc": {
"rid": "mosdepth-50_x_pc",
"clean_rid": "mosdepth-50_x_pc",
"title": "≥ 50X",
"description": "Fraction of genome with at least 50X coverage",
"scale": "RdYlGn",
"hidden": true,
"placement": 1000.0,
"namespace": "Mosdepth",
"colour": null,
"color": "77,175,74",
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
},
"median_coverage": {
"rid": "mosdepth-median_coverage",
"clean_rid": "mosdepth-median_coverage",
"title": "Median",
"description": "Median coverage",
"scale": "BuPu",
"hidden": false,
"placement": 1000.0,
"namespace": "Mosdepth",
"colour": null,
"color": "77,175,74",
"max": null,
"dmax": 839,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "X",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
},
{
"male": "#5bc0de"
},
{
"female": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false,
"modify": null,
"format": null
}
},
"rows_by_sgroup": {
"HCC1395_BL": [
{
"sample": "HCC1395_BL",
"data": {
"1_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"5_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"10_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"30_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"50_x_pc": {
"raw": 99.0,
"mod": 99.0,
"fmt": "99.0"
},
"median_coverage": {
"raw": 149,
"mod": 149,
"fmt": "149"
}
}
}
],
"HCC1395_tumor": [
{
"sample": "HCC1395_tumor",
"data": {
"1_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"5_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"10_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"30_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"50_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"median_coverage": {
"raw": 334,
"mod": 334,
"fmt": "334"
}
}
}
],
"Sig_18_Blood": [
{
"sample": "Sig_18_Blood",
"data": {
"1_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"5_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"10_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"30_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"50_x_pc": {
"raw": 99.0,
"mod": 99.0,
"fmt": "99.0"
},
"median_coverage": {
"raw": 195,
"mod": 195,
"fmt": "195"
}
}
}
],
"Sig_18_tissue": [
{
"sample": "Sig_18_tissue",
"data": {
"1_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"5_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"10_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"30_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"50_x_pc": {
"raw": 100.0,
"mod": 100.0,
"fmt": "100.0"
},
"median_coverage": {
"raw": 839,
"mod": 839,
"fmt": "839"
}
}
}
]
}
}
},
"headers_in_order": {
"1000.0": [
[
0,
"error_rate"
],
[
0,
"non-primary_alignments"
],
[
0,
"reads_mapped"
],
[
0,
"reads_mapped_percent"
],
[
0,
"reads_properly_paired_percent"
],
[
0,
"reads_MQ0_percent"
],
[
0,
"raw_total_sequences"
],
[
0,
"insert_size_average"
],
[
1,
"1_x_pc"
],
[
1,
"5_x_pc"
],
[
1,
"10_x_pc"
],
[
1,
"30_x_pc"
],
[
1,
"50_x_pc"
],
[
1,
"median_coverage"
]
]
}
},
"show_table_by_default": true,
"is_downsampled": false
}
],
"pconfig": {
"id": "general_stats_table",
"title": "General Statistics",
"subtitle": null,
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": null,
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"series_label": "samples",
"flat_if_very_large": false,
"namespace": "",
"save_file": true,
"raw_data_fn": "multiqc_general_stats",
"defaultsort": null,
"sortRows": true,
"sort_rows": true,
"only_defined_headers": true,
"col1_header": "Sample Name",
"no_beeswarm": false,
"no_violin": false,
"scale": "GnBu",
"min": null,
"parse_numeric": true,
"rows_are_samples": true
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [],
"square": false,
"flat": false,
"defer_render": false,
"section_anchor": null,
"module_anchor": null,
"violin_height": 70,
"extra_height": 63,
"no_violin": false,
"show_table": true,
"show_table_by_default": true,
"n_samples": 4,
"table_anchor": "general_stats_table_table"
}
},
"config_analysis_dir": [
"."
],
"config_git_hash": null,
"config_intro_text": null,
"config_report_comment": "This report has been generated by the nf-core/sarek analysis pipeline. For information about how to interpret these results, please see the documentation.\n",
"config_report_header_info": null,
"config_script_path": "/opt/conda/lib/python3.14/site-packages/multiqc",
"config_short_version": "1.33",
"config_subtitle": null,
"config_title": null,
"config_version": "1.33",
"config_output_dir": "/tmp/nxf.6RJhfc3liy",
"config_sample_names_rename": [],
"config_sample_names_rename_buttons": [],
"config_analysis_dir_abs": [
"/tmp/nxf.6RJhfc3liy"
],
"report_saved_raw_data": {
"multiqc_samtools_stats": {
"HCC1395_BL": {
"raw_total_sequences": 1322757.0,
"filtered_sequences": 0.0,
"sequences": 1322757.0,
"is_sorted": 1.0,
"1st_fragments": 659062.0,
"last_fragments": 663695.0,
"reads_mapped": 1322751.0,
"reads_mapped_and_paired": 1322741.0,
"reads_unmapped": 6.0,
"reads_properly_paired": 1322359.0,
"reads_paired": 1322757.0,
"reads_duplicated": 290924.0,
"reads_MQ0": 104606.0,
"reads_QC_failed": 0.0,
"non-primary_alignments": 0.0,
"supplementary_alignments": 172.0,
"total_length": 198413550.0,
"total_first_fragment_length": 98859300.0,
"total_last_fragment_length": 99554250.0,
"bases_mapped": 198412650.0,
"bases_mapped_(cigar)": 189673024.0,
"bases_trimmed": 0.0,
"bases_duplicated": 43638600.0,
"mismatches": 676687.0,
"error_rate": 0.00356765,
"average_length": 150.0,
"average_first_fragment_length": 150.0,
"average_last_fragment_length": 150.0,
"maximum_length": 150.0,
"maximum_first_fragment_length": 150.0,
"maximum_last_fragment_length": 150.0,
"average_quality": 35.9,
"insert_size_average": 283.6,
"insert_size_standard_deviation": 139.7,
"inward_oriented_pairs": 586702.0,
"outward_oriented_pairs": 74267.0,
"pairs_with_other_orientation": 165.0,
"pairs_on_different_chromosomes": 0.0,
"percentage_of_properly_paired_reads_(%)": 100.0,
"reads_mapped_percent": 99.99954640194684,
"reads_mapped_and_paired_percent": 99.99879040519158,
"reads_unmapped_percent": 0.00045359805315715586,
"reads_properly_paired_percent": 99.96991132914057,
"reads_paired_percent": 100.0,
"reads_duplicated_percent": 21.993760002782068,
"reads_MQ0_percent": 7.908179658092908,
"reads_QC_failed_percent": 0.0,
"reads_mapped_MQ1": 1218145.0
},
"HCC1395_tumor": {
"raw_total_sequences": 3617929.0,
"filtered_sequences": 0.0,
"sequences": 3617929.0,
"is_sorted": 1.0,
"1st_fragments": 1806639.0,
"last_fragments": 1811290.0,
"reads_mapped": 3617921.0,
"reads_mapped_and_paired": 3617902.0,
"reads_unmapped": 8.0,
"reads_properly_paired": 3616700.0,
"reads_paired": 3617929.0,
"reads_duplicated": 1525894.0,
"reads_MQ0": 279782.0,
"reads_QC_failed": 0.0,
"non-primary_alignments": 0.0,
"supplementary_alignments": 757.0,
"total_length": 542689350.0,
"total_first_fragment_length": 270995850.0,
"total_last_fragment_length": 271693500.0,
"bases_mapped": 542688150.0,
"bases_mapped_(cigar)": 516961994.0,
"bases_trimmed": 0.0,
"bases_duplicated": 228884100.0,
"mismatches": 1871418.0,
"error_rate": 0.00362003,
"average_length": 150.0,
"average_first_fragment_length": 150.0,
"average_last_fragment_length": 150.0,
"maximum_length": 150.0,
"maximum_first_fragment_length": 150.0,
"maximum_last_fragment_length": 150.0,
"average_quality": 36.0,
"insert_size_average": 273.5,
"insert_size_standard_deviation": 134.8,
"inward_oriented_pairs": 1593119.0,
"outward_oriented_pairs": 215049.0,
"pairs_with_other_orientation": 511.0,
"pairs_on_different_chromosomes": 3.0,
"percentage_of_properly_paired_reads_(%)": 100.0,
"reads_mapped_percent": 99.99977887902168,
"reads_mapped_and_paired_percent": 99.99925371669815,
"reads_unmapped_percent": 0.00022112097832765651,
"reads_properly_paired_percent": 99.9660302897044,
"reads_paired_percent": 100.0,
"reads_duplicated_percent": 42.17589676303764,
"reads_MQ0_percent": 7.73320869480855,
"reads_QC_failed_percent": 0.0,
"reads_mapped_MQ1": 3338139.0
},
"Sig_18_Blood": {
"raw_total_sequences": 1685332.0,
"filtered_sequences": 0.0,
"sequences": 1685332.0,
"is_sorted": 1.0,
"1st_fragments": 841709.0,
"last_fragments": 843623.0,
"reads_mapped": 1685328.0,
"reads_mapped_and_paired": 1685315.0,
"reads_unmapped": 4.0,
"reads_properly_paired": 1684980.0,
"reads_paired": 1685332.0,
"reads_duplicated": 258756.0,
"reads_MQ0": 125468.0,
"reads_QC_failed": 0.0,
"non-primary_alignments": 0.0,
"supplementary_alignments": 155.0,
"total_length": 252799800.0,
"total_first_fragment_length": 126256350.0,
"total_last_fragment_length": 126543450.0,
"bases_mapped": 252799200.0,
"bases_mapped_(cigar)": 242866722.0,
"bases_trimmed": 0.0,
"bases_duplicated": 38813400.0,
"mismatches": 914990.0,
"error_rate": 0.003767457,
"average_length": 150.0,
"average_first_fragment_length": 150.0,
"average_last_fragment_length": 150.0,
"maximum_length": 150.0,
"maximum_first_fragment_length": 150.0,
"maximum_last_fragment_length": 150.0,
"average_quality": 36.1,
"insert_size_average": 291.0,
"insert_size_standard_deviation": 142.5,
"inward_oriented_pairs": 756292.0,
"outward_oriented_pairs": 85991.0,
"pairs_with_other_orientation": 150.0,
"pairs_on_different_chromosomes": 2.0,
"percentage_of_properly_paired_reads_(%)": 100.0,
"reads_mapped_percent": 99.99976265804008,
"reads_mapped_and_paired_percent": 99.99899129667033,
"reads_unmapped_percent": 0.00023734195992243664,
"reads_properly_paired_percent": 99.97911390752682,
"reads_paired_percent": 100.0,
"reads_duplicated_percent": 15.353414045422504,
"reads_MQ0_percent": 7.44470525688707,
"reads_QC_failed_percent": 0.0,
"reads_mapped_MQ1": 1559860.0
},
"Sig_18_tissue": {
"raw_total_sequences": 9108467.0,
"filtered_sequences": 0.0,
"sequences": 9108467.0,
"is_sorted": 1.0,
"1st_fragments": 4548023.0,
"last_fragments": 4560444.0,
"reads_mapped": 9108433.0,
"reads_mapped_and_paired": 9108388.0,
"reads_unmapped": 34.0,
"reads_properly_paired": 9104471.0,
"reads_paired": 9108467.0,
"reads_duplicated": 3112907.0,
"reads_MQ0": 624566.0,
"reads_QC_failed": 0.0,
"non-primary_alignments": 0.0,
"supplementary_alignments": 1482.0,
"total_length": 1366270050.0,
"total_first_fragment_length": 682203450.0,
"total_last_fragment_length": 684066600.0,
"bases_mapped": 1366264950.0,
"bases_mapped_(cigar)": 1280357724.0,
"bases_trimmed": 0.0,
"bases_duplicated": 466936050.0,
"mismatches": 4588671.0,
"error_rate": 0.003583898,
"average_length": 150.0,
"average_first_fragment_length": 150.0,
"average_last_fragment_length": 150.0,
"maximum_length": 150.0,
"maximum_first_fragment_length": 150.0,
"maximum_last_fragment_length": 150.0,
"average_quality": 35.1,
"insert_size_average": 230.1,
"insert_size_standard_deviation": 108.4,
"inward_oriented_pairs": 3826866.0,
"outward_oriented_pairs": 726239.0,
"pairs_with_other_orientation": 752.0,
"pairs_on_different_chromosomes": 12.0,
"percentage_of_properly_paired_reads_(%)": 100.0,
"reads_mapped_percent": 99.99962672093999,
"reads_mapped_and_paired_percent": 99.99913267512525,
"reads_unmapped_percent": 0.0003732790600218456,
"reads_properly_paired_percent": 99.95612873165155,
"reads_paired_percent": 100.0,
"reads_duplicated_percent": 34.175970555747746,
"reads_MQ0_percent": 6.856982629458942,
"reads_QC_failed_percent": 0.0,
"reads_mapped_MQ1": 8483867.0
}
},
"mosdepth_cumcov_dist": {
"HCC1395_BL": {
"0": 100.0,
"2": 100.0,
"5": 100.0,
"7": 100.0,
"9": 100.0,
"12": 100.0,
"14": 100.0,
"16": 100.0,
"19": 100.0,
"21": 100.0,
"23": 100.0,
"26": 100.0,
"28": 100.0,
"30": 100.0,
"32": 100.0,
"35": 100.0,
"37": 99.0,
"39": 99.0,
"42": 99.0,
"44": 99.0,
"46": 99.0,
"49": 99.0,
"51": 98.0,
"53": 98.0,
"56": 98.0,
"58": 97.0,
"60": 97.0,
"63": 96.0,
"65": 95.0,
"67": 95.0,
"70": 94.0,
"72": 93.0,
"74": 92.0,
"77": 91.0,
"79": 90.0,
"81": 89.0,
"83": 89.0,
"86": 87.0,
"88": 86.0,
"90": 85.0,
"93": 83.0,
"95": 82.0,
"97": 81.0,
"100": 79.0,
"102": 78.0,
"104": 77.0,
"107": 75.0,
"109": 74.0,
"111": 73.0,
"114": 71.0,
"116": 70.0,
"118": 68.0,
"121": 67.0,
"123": 65.0,
"125": 64.0,
"128": 62.0,
"130": 61.0,
"132": 60.0,
"134": 59.0,
"137": 56.99999999999999,
"139": 56.00000000000001,
"141": 55.00000000000001,
"144": 53.0,
"146": 52.0,
"148": 50.0,
"151": 49.0,
"153": 48.0,
"155": 47.0,
"158": 45.0,
"160": 44.0,
"162": 43.0,
"165": 42.0,
"167": 41.0,
"169": 40.0,
"172": 38.0,
"174": 38.0,
"176": 37.0,
"179": 35.0,
"181": 35.0,
"183": 34.0,
"185": 33.0,
"188": 32.0,
"190": 31.0,
"192": 30.0,
"195": 28.999999999999996,
"197": 28.999999999999996,
"199": 28.000000000000004,
"202": 27.0,
"204": 26.0,
"206": 26.0,
"209": 25.0,
"211": 25.0,
"213": 24.0,
"216": 23.0,
"218": 23.0,
"220": 22.0,
"223": 22.0,
"225": 21.0,
"227": 21.0,
"230": 20.0,
"232": 20.0,
"234": 20.0,
"237": 19.0,
"239": 19.0,
"241": 19.0,
"243": 18.0,
"246": 18.0,
"248": 18.0,
"250": 18.0,
"253": 17.0,
"255": 17.0,
"257": 17.0,
"260": 17.0,
"262": 16.0,
"264": 16.0,
"267": 16.0,
"269": 16.0,
"271": 16.0,
"274": 16.0,
"276": 16.0,
"278": 15.0,
"281": 15.0,
"283": 15.0,
"285": 15.0,
"288": 15.0,
"290": 15.0,
"292": 15.0,
"294": 15.0,
"297": 15.0,
"299": 15.0,
"301": 15.0,
"304": 15.0,
"306": 14.000000000000002,
"308": 14.000000000000002,
"311": 14.000000000000002,
"313": 14.000000000000002,
"315": 14.000000000000002,
"318": 14.000000000000002,
"320": 14.000000000000002,
"322": 14.000000000000002,
"325": 14.000000000000002,
"327": 14.000000000000002,
"329": 14.000000000000002,
"332": 14.000000000000002,
"334": 14.000000000000002,
"336": 14.000000000000002,
"339": 14.000000000000002,
"341": 14.000000000000002,
"343": 14.000000000000002,
"345": 13.0,
"348": 13.0,
"350": 13.0,
"352": 13.0,
"355": 13.0,
"357": 13.0,
"359": 13.0,
"362": 13.0,
"364": 13.0,
"366": 13.0,
"369": 13.0,
"371": 13.0,
"373": 13.0,
"376": 13.0,
"378": 13.0,
"380": 13.0,
"383": 13.0,
"385": 13.0,
"387": 13.0,
"390": 13.0,
"392": 13.0,
"394": 13.0,
"396": 13.0,
"399": 13.0,
"401": 13.0,
"403": 13.0,
"406": 13.0,
"408": 13.0,
"410": 13.0,
"413": 13.0,
"415": 12.0,
"417": 12.0,
"420": 12.0,
"422": 12.0,
"424": 12.0,
"427": 12.0,
"429": 12.0,
"431": 12.0,
"434": 12.0,
"436": 12.0,
"438": 12.0,
"441": 12.0,
"443": 12.0,
"445": 12.0,
"447": 12.0,
"450": 12.0,
"452": 12.0,
"454": 12.0,
"457": 12.0,
"459": 12.0,
"461": 12.0,
"464": 12.0,
"466": 12.0,
"468": 12.0,
"471": 12.0,
"473": 12.0,
"475": 12.0,
"478": 12.0,
"480": 12.0,
"482": 12.0,
"485": 12.0,
"487": 12.0,
"489": 12.0,
"492": 12.0,
"494": 12.0,
"496": 12.0,
"499": 12.0,
"501": 12.0,
"503": 12.0,
"505": 12.0,
"508": 12.0,
"510": 12.0,
"512": 12.0,
"515": 12.0,
"517": 12.0,
"519": 11.0,
"522": 11.0,
"524": 11.0,
"526": 11.0,
"529": 11.0,
"531": 11.0,
"533": 11.0,
"536": 11.0,
"538": 11.0,
"540": 11.0,
"543": 11.0,
"545": 11.0,
"547": 11.0,
"550": 11.0,
"552": 11.0,
"554": 11.0,
"556": 11.0,
"559": 11.0,
"561": 11.0,
"563": 11.0,
"566": 11.0,
"568": 11.0,
"570": 11.0,
"573": 11.0,
"575": 11.0,
"577": 11.0,
"580": 11.0,
"582": 11.0,
"584": 11.0,
"587": 11.0,
"589": 11.0,
"591": 11.0,
"594": 11.0,
"596": 11.0,
"598": 11.0,
"601": 11.0,
"603": 11.0,
"605": 11.0,
"607": 11.0,
"610": 10.0,
"612": 10.0,
"614": 10.0,
"617": 10.0,
"619": 10.0,
"621": 10.0,
"624": 10.0,
"626": 10.0,
"628": 10.0,
"631": 10.0,
"633": 10.0,
"635": 10.0,
"638": 10.0,
"640": 10.0,
"642": 10.0,
"645": 10.0,
"647": 10.0,
"649": 10.0,
"652": 10.0,
"654": 10.0,
"656": 10.0,
"658": 10.0,
"661": 10.0,
"663": 10.0,
"665": 10.0,
"668": 9.0,
"670": 9.0,
"672": 9.0,
"675": 9.0,
"677": 9.0,
"679": 9.0,
"682": 9.0,
"684": 9.0,
"686": 9.0,
"689": 9.0,
"691": 9.0,
"693": 9.0,
"696": 9.0,
"698": 9.0,
"700": 9.0,
"703": 9.0,
"705": 9.0,
"707": 9.0,
"710": 9.0,
"712": 9.0,
"714": 9.0,
"716": 9.0,
"719": 9.0,
"721": 9.0,
"723": 9.0,
"726": 8.0,
"728": 8.0,
"730": 8.0,
"733": 8.0,
"735": 8.0,
"737": 8.0,
"740": 8.0,
"742": 8.0,
"744": 8.0,
"747": 8.0,
"749": 8.0,
"751": 8.0,
"754": 8.0,
"756": 8.0,
"758": 8.0,
"761": 8.0,
"763": 8.0,
"765": 8.0,
"767": 8.0,
"770": 8.0,
"772": 8.0,
"774": 8.0,
"777": 8.0,
"779": 8.0,
"781": 7.000000000000001,
"784": 7.000000000000001,
"786": 7.000000000000001,
"788": 7.000000000000001,
"791": 7.000000000000001,
"793": 7.000000000000001,
"795": 7.000000000000001,
"798": 7.000000000000001,
"800": 7.000000000000001,
"802": 7.000000000000001,
"805": 7.000000000000001,
"807": 7.000000000000001,
"809": 7.000000000000001,
"812": 7.000000000000001,
"814": 7.000000000000001,
"816": 7.000000000000001,
"818": 7.000000000000001,
"821": 7.000000000000001,
"823": 7.000000000000001,
"825": 7.000000000000001,
"828": 6.0,
"830": 6.0,
"832": 6.0,
"835": 6.0,
"837": 6.0,
"839": 6.0,
"842": 6.0,
"844": 6.0,
"846": 6.0,
"849": 6.0,
"851": 6.0,
"853": 6.0,
"856": 6.0,
"858": 6.0,
"860": 6.0,
"863": 6.0,
"865": 6.0,
"867": 6.0,
"869": 5.0,
"872": 5.0,
"874": 5.0,
"876": 5.0,
"879": 5.0,
"881": 5.0,
"883": 5.0,
"886": 5.0,
"888": 5.0,
"890": 5.0,
"893": 5.0,
"895": 5.0,
"897": 5.0,
"900": 5.0,
"902": 5.0,
"904": 5.0,
"907": 5.0,
"909": 5.0,
"911": 5.0,
"914": 5.0,
"916": 4.0,
"918": 4.0,
"920": 4.0,
"923": 4.0,
"925": 4.0,
"927": 4.0,
"930": 4.0,
"932": 4.0,
"934": 4.0,
"937": 4.0,
"939": 4.0,
"941": 4.0,
"944": 4.0,
"946": 4.0,
"948": 4.0,
"951": 4.0,
"953": 4.0,
"955": 4.0,
"958": 4.0,
"960": 4.0,
"962": 4.0,
"965": 3.0,
"967": 3.0,
"969": 3.0,
"972": 3.0,
"974": 3.0,
"976": 3.0,
"978": 3.0,
"981": 3.0,
"983": 3.0,
"985": 3.0,
"988": 3.0,
"990": 3.0,
"992": 3.0,
"995": 3.0,
"997": 3.0,
"999": 3.0,
"1002": 3.0,
"1004": 3.0,
"1006": 3.0,
"1009": 3.0,
"1011": 3.0,
"1013": 2.0,
"1016": 2.0,
"1018": 2.0,
"1020": 2.0,
"1023": 2.0,
"1025": 2.0,
"1027": 2.0,
"1029": 2.0,
"1032": 2.0,
"1034": 2.0,
"1036": 2.0,
"1039": 2.0,
"1041": 2.0,
"1043": 2.0,
"1046": 2.0,
"1048": 2.0,
"1050": 2.0,
"1053": 2.0,
"1055": 2.0,
"1057": 2.0,
"1060": 2.0,
"1062": 2.0,
"1064": 2.0,
"1067": 2.0,
"1069": 2.0,
"1071": 2.0,
"1074": 1.0,
"1076": 1.0,
"1078": 1.0,
"1080": 1.0,
"1083": 1.0,
"1085": 1.0,
"1087": 1.0,
"1090": 1.0,
"1092": 1.0,
"1094": 1.0,
"1097": 1.0,
"1099": 1.0,
"1101": 1.0,
"1104": 1.0,
"1106": 1.0,
"1108": 1.0,
"1111": 1.0,
"1113": 1.0,
"1115": 1.0,
"1118": 1.0,
"1120": 1.0,
"1122": 1.0,
"1125": 1.0,
"1127": 1.0,
"1129": 1.0,
"1131": 1.0,
"1134": 1.0,
"1136": 1.0,
"1138": 1.0,
"1141": 1.0,
"1143": 1.0,
"1145": 1.0,
"1148": 1.0,
"1150": 1.0,
"1152": 1.0,
"1155": 1.0,
"1157": 1.0
},
"HCC1395_tumor": {
"0": 100.0,
"3": 100.0,
"7": 100.0,
"10": 100.0,
"13": 100.0,
"16": 100.0,
"20": 100.0,
"23": 100.0,
"26": 100.0,
"30": 100.0,
"33": 100.0,
"36": 100.0,
"40": 100.0,
"43": 100.0,
"46": 100.0,
"49": 100.0,
"53": 100.0,
"56": 100.0,
"59": 100.0,
"63": 100.0,
"66": 100.0,
"69": 100.0,
"72": 99.0,
"76": 99.0,
"79": 99.0,
"82": 99.0,
"86": 99.0,
"89": 99.0,
"92": 99.0,
"95": 99.0,
"99": 99.0,
"102": 98.0,
"105": 98.0,
"109": 98.0,
"112": 98.0,
"115": 97.0,
"119": 97.0,
"122": 97.0,
"125": 97.0,
"128": 96.0,
"132": 96.0,
"135": 96.0,
"138": 95.0,
"142": 95.0,
"145": 95.0,
"148": 94.0,
"151": 94.0,
"155": 93.0,
"158": 93.0,
"161": 92.0,
"165": 92.0,
"168": 91.0,
"171": 91.0,
"175": 90.0,
"178": 89.0,
"181": 89.0,
"184": 88.0,
"188": 87.0,
"191": 87.0,
"194": 86.0,
"198": 85.0,
"201": 84.0,
"204": 83.0,
"207": 83.0,
"211": 82.0,
"214": 81.0,
"217": 80.0,
"221": 79.0,
"224": 78.0,
"227": 78.0,
"230": 77.0,
"234": 76.0,
"237": 75.0,
"240": 74.0,
"244": 73.0,
"247": 72.0,
"250": 71.0,
"254": 70.0,
"257": 70.0,
"260": 69.0,
"263": 68.0,
"267": 67.0,
"270": 66.0,
"273": 65.0,
"277": 64.0,
"280": 63.0,
"283": 62.0,
"286": 62.0,
"290": 61.0,
"293": 60.0,
"296": 59.0,
"300": 57.99999999999999,
"303": 56.99999999999999,
"306": 56.99999999999999,
"310": 56.00000000000001,
"313": 55.00000000000001,
"316": 54.0,
"319": 53.0,
"323": 52.0,
"326": 52.0,
"329": 51.0,
"333": 50.0,
"336": 49.0,
"339": 49.0,
"342": 48.0,
"346": 47.0,
"349": 46.0,
"352": 45.0,
"356": 45.0,
"359": 44.0,
"362": 43.0,
"365": 43.0,
"369": 42.0,
"372": 41.0,
"375": 41.0,
"379": 40.0,
"382": 39.0,
"385": 39.0,
"389": 38.0,
"392": 37.0,
"395": 37.0,
"398": 36.0,
"402": 36.0,
"405": 35.0,
"408": 34.0,
"412": 34.0,
"415": 33.0,
"418": 33.0,
"421": 32.0,
"425": 32.0,
"428": 31.0,
"431": 31.0,
"435": 30.0,
"438": 30.0,
"441": 28.999999999999996,
"444": 28.999999999999996,
"448": 28.000000000000004,
"451": 28.000000000000004,
"454": 27.0,
"458": 27.0,
"461": 26.0,
"464": 26.0,
"468": 26.0,
"471": 25.0,
"474": 25.0,
"477": 25.0,
"481": 24.0,
"484": 24.0,
"487": 23.0,
"491": 23.0,
"494": 23.0,
"497": 23.0,
"500": 22.0,
"504": 22.0,
"507": 22.0,
"510": 21.0,
"514": 21.0,
"517": 21.0,
"520": 21.0,
"524": 20.0,
"527": 20.0,
"530": 20.0,
"533": 20.0,
"537": 19.0,
"540": 19.0,
"543": 19.0,
"547": 19.0,
"550": 19.0,
"553": 19.0,
"556": 18.0,
"560": 18.0,
"563": 18.0,
"566": 18.0,
"570": 18.0,
"573": 17.0,
"576": 17.0,
"579": 17.0,
"583": 17.0,
"586": 17.0,
"589": 17.0,
"593": 17.0,
"596": 16.0,
"599": 16.0,
"603": 16.0,
"606": 16.0,
"609": 16.0,
"612": 16.0,
"616": 16.0,
"619": 16.0,
"622": 16.0,
"626": 15.0,
"629": 15.0,
"632": 15.0,
"635": 15.0,
"639": 15.0,
"642": 15.0,
"645": 15.0,
"649": 15.0,
"652": 15.0,
"655": 15.0,
"659": 15.0,
"662": 14.000000000000002,
"665": 14.000000000000002,
"668": 14.000000000000002,
"672": 14.000000000000002,
"675": 14.000000000000002,
"678": 14.000000000000002,
"682": 14.000000000000002,
"685": 14.000000000000002,
"688": 14.000000000000002,
"691": 14.000000000000002,
"695": 14.000000000000002,
"698": 13.0,
"701": 13.0,
"705": 13.0,
"708": 13.0,
"711": 13.0,
"714": 13.0,
"718": 13.0,
"721": 13.0,
"724": 13.0,
"728": 13.0,
"731": 13.0,
"734": 13.0,
"738": 13.0,
"741": 13.0,
"744": 12.0,
"747": 12.0,
"751": 12.0,
"754": 12.0,
"757": 12.0,
"761": 12.0,
"764": 12.0,
"767": 12.0,
"770": 12.0,
"774": 12.0,
"777": 12.0,
"780": 12.0,
"784": 12.0,
"787": 12.0,
"790": 12.0,
"794": 12.0,
"797": 12.0,
"800": 12.0,
"803": 12.0,
"807": 12.0,
"810": 12.0,
"813": 12.0,
"817": 12.0,
"820": 12.0,
"823": 12.0,
"826": 12.0,
"830": 12.0,
"833": 12.0,
"836": 12.0,
"840": 11.0,
"843": 11.0,
"846": 11.0,
"849": 11.0,
"853": 11.0,
"856": 11.0,
"859": 11.0,
"863": 11.0,
"866": 11.0,
"869": 11.0,
"873": 11.0,
"876": 11.0,
"879": 11.0,
"882": 11.0,
"886": 11.0,
"889": 11.0,
"892": 11.0,
"896": 11.0,
"899": 11.0,
"902": 11.0,
"905": 11.0,
"909": 11.0,
"912": 11.0,
"915": 11.0,
"919": 11.0,
"922": 11.0,
"925": 11.0,
"929": 11.0,
"932": 11.0,
"935": 11.0,
"938": 11.0,
"942": 11.0,
"945": 11.0,
"948": 10.0,
"952": 10.0,
"955": 10.0,
"958": 10.0,
"961": 10.0,
"965": 10.0,
"968": 10.0,
"971": 10.0,
"975": 10.0,
"978": 10.0,
"981": 10.0,
"984": 10.0,
"988": 10.0,
"991": 10.0,
"994": 10.0,
"998": 10.0,
"1001": 10.0,
"1004": 10.0,
"1008": 10.0,
"1011": 10.0,
"1014": 10.0,
"1017": 10.0,
"1021": 10.0,
"1024": 10.0,
"1027": 10.0,
"1031": 10.0,
"1034": 10.0,
"1037": 10.0,
"1040": 10.0,
"1044": 10.0,
"1047": 10.0,
"1050": 10.0,
"1054": 10.0,
"1057": 9.0,
"1060": 9.0,
"1064": 9.0,
"1067": 9.0,
"1070": 9.0,
"1073": 9.0,
"1077": 9.0,
"1080": 9.0,
"1083": 9.0,
"1087": 9.0,
"1090": 9.0,
"1093": 9.0,
"1096": 9.0,
"1100": 9.0,
"1103": 9.0,
"1106": 9.0,
"1110": 9.0,
"1113": 9.0,
"1116": 9.0,
"1119": 9.0,
"1123": 9.0,
"1126": 9.0,
"1129": 9.0,
"1133": 9.0,
"1136": 9.0,
"1139": 8.0,
"1143": 8.0,
"1146": 8.0,
"1149": 8.0,
"1152": 8.0,
"1156": 8.0,
"1159": 8.0,
"1162": 8.0,
"1166": 8.0,
"1169": 8.0,
"1172": 8.0,
"1175": 8.0,
"1179": 8.0,
"1182": 8.0,
"1185": 8.0,
"1189": 8.0,
"1192": 8.0,
"1195": 8.0,
"1199": 8.0,
"1202": 8.0,
"1205": 8.0,
"1208": 8.0,
"1212": 8.0,
"1215": 8.0,
"1218": 7.000000000000001,
"1222": 7.000000000000001,
"1225": 7.000000000000001,
"1228": 7.000000000000001,
"1231": 7.000000000000001,
"1235": 7.000000000000001,
"1238": 7.000000000000001,
"1241": 7.000000000000001,
"1245": 7.000000000000001,
"1248": 7.000000000000001,
"1251": 7.000000000000001,
"1254": 7.000000000000001,
"1258": 7.000000000000001,
"1261": 7.000000000000001,
"1264": 7.000000000000001,
"1268": 7.000000000000001,
"1271": 7.000000000000001,
"1274": 7.000000000000001,
"1278": 7.000000000000001,
"1281": 7.000000000000001,
"1284": 7.000000000000001,
"1287": 7.000000000000001,
"1291": 7.000000000000001,
"1294": 7.000000000000001,
"1297": 6.0,
"1301": 6.0,
"1304": 6.0,
"1307": 6.0,
"1310": 6.0,
"1314": 6.0,
"1317": 6.0,
"1320": 6.0,
"1324": 6.0,
"1327": 6.0,
"1330": 6.0,
"1333": 6.0,
"1337": 6.0,
"1340": 6.0,
"1343": 6.0,
"1347": 6.0,
"1350": 6.0,
"1353": 6.0,
"1357": 5.0,
"1360": 5.0,
"1363": 5.0,
"1366": 5.0,
"1370": 5.0,
"1373": 5.0,
"1376": 5.0,
"1380": 5.0,
"1383": 5.0,
"1386": 5.0,
"1389": 5.0,
"1393": 5.0,
"1396": 5.0,
"1399": 5.0,
"1403": 5.0,
"1406": 5.0,
"1409": 5.0,
"1413": 4.0,
"1416": 4.0,
"1419": 4.0,
"1422": 4.0,
"1426": 4.0,
"1429": 4.0,
"1432": 4.0,
"1436": 4.0,
"1439": 4.0,
"1442": 4.0,
"1445": 4.0,
"1449": 4.0,
"1452": 4.0,
"1455": 4.0,
"1459": 3.0,
"1462": 3.0,
"1465": 3.0,
"1468": 3.0,
"1472": 3.0,
"1475": 3.0,
"1478": 3.0,
"1482": 3.0,
"1485": 3.0,
"1488": 3.0,
"1492": 3.0,
"1495": 3.0,
"1498": 3.0,
"1501": 3.0,
"1505": 3.0,
"1508": 3.0,
"1511": 2.0,
"1515": 2.0,
"1518": 2.0,
"1521": 2.0,
"1524": 2.0,
"1528": 2.0,
"1531": 2.0,
"1534": 2.0,
"1538": 2.0,
"1541": 2.0,
"1544": 2.0,
"1548": 2.0,
"1551": 2.0,
"1554": 2.0,
"1557": 2.0,
"1561": 2.0,
"1564": 2.0,
"1567": 1.0,
"1571": 1.0,
"1574": 1.0,
"1577": 1.0,
"1580": 1.0,
"1584": 1.0,
"1587": 1.0,
"1590": 1.0,
"1594": 1.0,
"1597": 1.0,
"1600": 1.0,
"1603": 1.0,
"1607": 1.0,
"1610": 1.0,
"1613": 1.0,
"1617": 1.0,
"1620": 1.0,
"1623": 1.0,
"1627": 1.0,
"1630": 1.0,
"1633": 1.0,
"1636": 1.0,
"1640": 1.0,
"1643": 1.0
},
"Sig_18_Blood": {
"0": 100.0,
"4": 100.0,
"7": 100.0,
"11": 100.0,
"15": 100.0,
"19": 100.0,
"22": 100.0,
"26": 100.0,
"30": 100.0,
"34": 100.0,
"37": 100.0,
"41": 100.0,
"45": 100.0,
"48": 100.0,
"52": 99.0,
"56": 99.0,
"60": 99.0,
"63": 99.0,
"67": 99.0,
"71": 98.0,
"74": 98.0,
"78": 97.0,
"82": 97.0,
"86": 96.0,
"89": 95.0,
"93": 94.0,
"97": 93.0,
"101": 92.0,
"104": 91.0,
"108": 90.0,
"112": 88.0,
"115": 87.0,
"119": 85.0,
"123": 84.0,
"127": 82.0,
"130": 80.0,
"134": 79.0,
"138": 77.0,
"141": 75.0,
"145": 73.0,
"149": 71.0,
"153": 69.0,
"156": 68.0,
"160": 66.0,
"164": 64.0,
"168": 62.0,
"171": 61.0,
"175": 59.0,
"179": 56.99999999999999,
"182": 55.00000000000001,
"186": 54.0,
"190": 52.0,
"194": 50.0,
"197": 49.0,
"201": 47.0,
"205": 46.0,
"209": 44.0,
"212": 43.0,
"216": 41.0,
"220": 40.0,
"223": 39.0,
"227": 38.0,
"231": 36.0,
"235": 35.0,
"238": 34.0,
"242": 33.0,
"246": 32.0,
"249": 31.0,
"253": 30.0,
"257": 28.999999999999996,
"261": 28.000000000000004,
"264": 27.0,
"268": 26.0,
"272": 26.0,
"276": 25.0,
"279": 24.0,
"283": 24.0,
"287": 23.0,
"290": 22.0,
"294": 22.0,
"298": 21.0,
"302": 21.0,
"305": 20.0,
"309": 20.0,
"313": 19.0,
"316": 19.0,
"320": 19.0,
"324": 18.0,
"328": 18.0,
"331": 18.0,
"335": 18.0,
"339": 17.0,
"343": 17.0,
"346": 17.0,
"350": 17.0,
"354": 17.0,
"357": 16.0,
"361": 16.0,
"365": 16.0,
"369": 16.0,
"372": 16.0,
"376": 15.0,
"380": 15.0,
"384": 15.0,
"387": 15.0,
"391": 15.0,
"395": 15.0,
"398": 15.0,
"402": 15.0,
"406": 15.0,
"410": 14.000000000000002,
"413": 14.000000000000002,
"417": 14.000000000000002,
"421": 14.000000000000002,
"424": 14.000000000000002,
"428": 14.000000000000002,
"432": 14.000000000000002,
"436": 14.000000000000002,
"439": 14.000000000000002,
"443": 14.000000000000002,
"447": 14.000000000000002,
"451": 14.000000000000002,
"454": 14.000000000000002,
"458": 14.000000000000002,
"462": 14.000000000000002,
"465": 14.000000000000002,
"469": 14.000000000000002,
"473": 14.000000000000002,
"477": 14.000000000000002,
"480": 13.0,
"484": 13.0,
"488": 13.0,
"491": 13.0,
"495": 13.0,
"499": 13.0,
"503": 13.0,
"506": 13.0,
"510": 13.0,
"514": 13.0,
"518": 13.0,
"521": 13.0,
"525": 13.0,
"529": 13.0,
"532": 13.0,
"536": 13.0,
"540": 13.0,
"544": 13.0,
"547": 13.0,
"551": 13.0,
"555": 13.0,
"559": 13.0,
"562": 13.0,
"566": 13.0,
"570": 13.0,
"573": 13.0,
"577": 13.0,
"581": 13.0,
"585": 13.0,
"588": 13.0,
"592": 13.0,
"596": 13.0,
"599": 13.0,
"603": 12.0,
"607": 12.0,
"611": 12.0,
"614": 12.0,
"618": 12.0,
"622": 12.0,
"626": 12.0,
"629": 12.0,
"633": 12.0,
"637": 12.0,
"640": 12.0,
"644": 12.0,
"648": 12.0,
"652": 12.0,
"655": 12.0,
"659": 12.0,
"663": 12.0,
"666": 12.0,
"670": 12.0,
"674": 12.0,
"678": 12.0,
"681": 12.0,
"685": 12.0,
"689": 12.0,
"693": 12.0,
"696": 12.0,
"700": 12.0,
"704": 12.0,
"707": 12.0,
"711": 12.0,
"715": 12.0,
"719": 12.0,
"722": 12.0,
"726": 12.0,
"730": 12.0,
"734": 12.0,
"737": 12.0,
"741": 12.0,
"745": 12.0,
"748": 12.0,
"752": 12.0,
"756": 12.0,
"760": 12.0,
"763": 11.0,
"767": 11.0,
"771": 11.0,
"774": 11.0,
"778": 11.0,
"782": 11.0,
"786": 11.0,
"789": 11.0,
"793": 11.0,
"797": 11.0,
"801": 11.0,
"804": 11.0,
"808": 11.0,
"812": 11.0,
"815": 11.0,
"819": 11.0,
"823": 11.0,
"827": 11.0,
"830": 11.0,
"834": 11.0,
"838": 11.0,
"841": 11.0,
"845": 11.0,
"849": 11.0,
"853": 11.0,
"856": 11.0,
"860": 11.0,
"864": 11.0,
"868": 11.0,
"871": 11.0,
"875": 11.0,
"879": 11.0,
"882": 11.0,
"886": 11.0,
"890": 11.0,
"894": 11.0,
"897": 11.0,
"901": 11.0,
"905": 10.0,
"909": 10.0,
"912": 10.0,
"916": 10.0,
"920": 10.0,
"923": 10.0,
"927": 10.0,
"931": 10.0,
"935": 10.0,
"938": 10.0,
"942": 10.0,
"946": 10.0,
"949": 10.0,
"953": 10.0,
"957": 10.0,
"961": 10.0,
"964": 10.0,
"968": 10.0,
"972": 10.0,
"976": 10.0,
"979": 10.0,
"983": 10.0,
"987": 10.0,
"990": 10.0,
"994": 9.0,
"998": 9.0,
"1002": 9.0,
"1005": 9.0,
"1009": 9.0,
"1013": 9.0,
"1017": 9.0,
"1020": 9.0,
"1024": 9.0,
"1028": 9.0,
"1031": 9.0,
"1035": 9.0,
"1039": 9.0,
"1043": 9.0,
"1046": 9.0,
"1050": 9.0,
"1054": 9.0,
"1057": 9.0,
"1061": 9.0,
"1065": 9.0,
"1069": 9.0,
"1072": 9.0,
"1076": 9.0,
"1080": 9.0,
"1084": 9.0,
"1087": 9.0,
"1091": 9.0,
"1095": 9.0,
"1098": 9.0,
"1102": 8.0,
"1106": 8.0,
"1110": 8.0,
"1113": 8.0,
"1117": 8.0,
"1121": 8.0,
"1124": 8.0,
"1128": 8.0,
"1132": 8.0,
"1136": 8.0,
"1139": 8.0,
"1143": 8.0,
"1147": 8.0,
"1151": 8.0,
"1154": 8.0,
"1158": 8.0,
"1162": 8.0,
"1165": 8.0,
"1169": 8.0,
"1173": 8.0,
"1177": 8.0,
"1180": 8.0,
"1184": 8.0,
"1188": 8.0,
"1192": 8.0,
"1195": 8.0,
"1199": 8.0,
"1203": 8.0,
"1206": 8.0,
"1210": 8.0,
"1214": 8.0,
"1218": 8.0,
"1221": 8.0,
"1225": 7.000000000000001,
"1229": 7.000000000000001,
"1232": 7.000000000000001,
"1236": 7.000000000000001,
"1240": 7.000000000000001,
"1244": 7.000000000000001,
"1247": 7.000000000000001,
"1251": 7.000000000000001,
"1255": 7.000000000000001,
"1259": 7.000000000000001,
"1262": 7.000000000000001,
"1266": 7.000000000000001,
"1270": 7.000000000000001,
"1273": 7.000000000000001,
"1277": 7.000000000000001,
"1281": 7.000000000000001,
"1285": 7.000000000000001,
"1288": 7.000000000000001,
"1292": 7.000000000000001,
"1296": 7.000000000000001,
"1299": 7.000000000000001,
"1303": 7.000000000000001,
"1307": 7.000000000000001,
"1311": 7.000000000000001,
"1314": 7.000000000000001,
"1318": 6.0,
"1322": 6.0,
"1326": 6.0,
"1329": 6.0,
"1333": 6.0,
"1337": 6.0,
"1340": 6.0,
"1344": 6.0,
"1348": 6.0,
"1352": 6.0,
"1355": 6.0,
"1359": 6.0,
"1363": 6.0,
"1367": 6.0,
"1370": 6.0,
"1374": 6.0,
"1378": 6.0,
"1381": 6.0,
"1385": 6.0,
"1389": 6.0,
"1393": 5.0,
"1396": 5.0,
"1400": 5.0,
"1404": 5.0,
"1407": 5.0,
"1411": 5.0,
"1415": 5.0,
"1419": 5.0,
"1422": 5.0,
"1426": 5.0,
"1430": 5.0,
"1434": 5.0,
"1437": 5.0,
"1441": 5.0,
"1445": 5.0,
"1448": 5.0,
"1452": 5.0,
"1456": 5.0,
"1460": 5.0,
"1463": 4.0,
"1467": 4.0,
"1471": 4.0,
"1474": 4.0,
"1478": 4.0,
"1482": 4.0,
"1486": 4.0,
"1489": 4.0,
"1493": 4.0,
"1497": 4.0,
"1501": 4.0,
"1504": 4.0,
"1508": 4.0,
"1512": 4.0,
"1515": 4.0,
"1519": 4.0,
"1523": 4.0,
"1527": 4.0,
"1530": 4.0,
"1534": 4.0,
"1538": 3.0,
"1542": 3.0,
"1545": 3.0,
"1549": 3.0,
"1553": 3.0,
"1556": 3.0,
"1560": 3.0,
"1564": 3.0,
"1568": 3.0,
"1571": 3.0,
"1575": 3.0,
"1579": 3.0,
"1582": 3.0,
"1586": 3.0,
"1590": 3.0,
"1594": 3.0,
"1597": 3.0,
"1601": 3.0,
"1605": 2.0,
"1609": 2.0,
"1612": 2.0,
"1616": 2.0,
"1620": 2.0,
"1623": 2.0,
"1627": 2.0,
"1631": 2.0,
"1635": 2.0,
"1638": 2.0,
"1642": 2.0,
"1646": 2.0,
"1649": 2.0,
"1653": 2.0,
"1657": 2.0,
"1661": 2.0,
"1664": 2.0,
"1668": 2.0,
"1672": 2.0,
"1676": 2.0,
"1679": 2.0,
"1683": 2.0,
"1687": 2.0,
"1690": 1.0,
"1694": 1.0,
"1698": 1.0,
"1702": 1.0,
"1705": 1.0,
"1709": 1.0,
"1713": 1.0,
"1717": 1.0,
"1720": 1.0,
"1724": 1.0,
"1728": 1.0,
"1731": 1.0,
"1735": 1.0,
"1739": 1.0,
"1743": 1.0,
"1746": 1.0,
"1750": 1.0,
"1754": 1.0,
"1757": 1.0,
"1761": 1.0,
"1765": 1.0,
"1769": 1.0,
"1772": 1.0,
"1776": 1.0,
"1780": 1.0,
"1784": 1.0,
"1787": 1.0,
"1791": 1.0,
"1795": 1.0,
"1798": 1.0,
"1802": 1.0,
"1806": 1.0,
"1810": 1.0,
"1813": 1.0,
"1817": 1.0,
"1821": 1.0,
"1824": 1.0,
"1828": 1.0,
"1832": 1.0,
"1836": 1.0,
"1839": 1.0,
"1843": 1.0,
"1847": 1.0,
"1851": 1.0,
"1854": 1.0,
"1858": 1.0
},
"Sig_18_tissue": {
"0": 100.0,
"11": 100.0,
"22": 100.0,
"34": 100.0,
"45": 100.0,
"56": 100.0,
"67": 100.0,
"79": 100.0,
"90": 100.0,
"101": 100.0,
"112": 100.0,
"124": 100.0,
"135": 100.0,
"146": 100.0,
"157": 100.0,
"168": 100.0,
"180": 99.0,
"191": 99.0,
"202": 99.0,
"213": 99.0,
"225": 99.0,
"236": 99.0,
"247": 98.0,
"258": 98.0,
"270": 98.0,
"281": 97.0,
"292": 97.0,
"303": 96.0,
"315": 96.0,
"326": 95.0,
"337": 95.0,
"348": 94.0,
"359": 93.0,
"371": 92.0,
"382": 91.0,
"393": 91.0,
"404": 90.0,
"416": 89.0,
"427": 88.0,
"438": 87.0,
"449": 86.0,
"461": 85.0,
"472": 84.0,
"483": 83.0,
"494": 82.0,
"505": 81.0,
"517": 80.0,
"528": 79.0,
"539": 78.0,
"550": 77.0,
"562": 76.0,
"573": 75.0,
"584": 74.0,
"595": 73.0,
"607": 72.0,
"618": 71.0,
"629": 70.0,
"640": 69.0,
"651": 68.0,
"663": 67.0,
"674": 66.0,
"685": 65.0,
"696": 64.0,
"708": 62.0,
"719": 61.0,
"730": 60.0,
"741": 59.0,
"753": 57.99999999999999,
"764": 56.99999999999999,
"775": 56.00000000000001,
"786": 55.00000000000001,
"798": 53.0,
"809": 52.0,
"820": 51.0,
"831": 50.0,
"842": 49.0,
"854": 48.0,
"865": 47.0,
"876": 46.0,
"887": 46.0,
"899": 45.0,
"910": 44.0,
"921": 43.0,
"932": 42.0,
"944": 41.0,
"955": 40.0,
"966": 39.0,
"977": 39.0,
"988": 38.0,
"1000": 37.0,
"1011": 36.0,
"1022": 36.0,
"1033": 35.0,
"1045": 34.0,
"1056": 34.0,
"1067": 33.0,
"1078": 32.0,
"1090": 32.0,
"1101": 31.0,
"1112": 30.0,
"1123": 30.0,
"1134": 28.999999999999996,
"1146": 28.999999999999996,
"1157": 28.000000000000004,
"1168": 28.000000000000004,
"1179": 27.0,
"1191": 27.0,
"1202": 26.0,
"1213": 26.0,
"1224": 25.0,
"1236": 25.0,
"1247": 25.0,
"1258": 24.0,
"1269": 24.0,
"1281": 23.0,
"1292": 23.0,
"1303": 23.0,
"1314": 22.0,
"1325": 22.0,
"1337": 22.0,
"1348": 21.0,
"1359": 21.0,
"1370": 21.0,
"1382": 20.0,
"1393": 20.0,
"1404": 20.0,
"1415": 20.0,
"1427": 19.0,
"1438": 19.0,
"1449": 19.0,
"1460": 19.0,
"1471": 18.0,
"1483": 18.0,
"1494": 18.0,
"1505": 18.0,
"1516": 18.0,
"1528": 17.0,
"1539": 17.0,
"1550": 17.0,
"1561": 17.0,
"1573": 17.0,
"1584": 17.0,
"1595": 16.0,
"1606": 16.0,
"1617": 16.0,
"1629": 16.0,
"1640": 16.0,
"1651": 16.0,
"1662": 16.0,
"1674": 15.0,
"1685": 15.0,
"1696": 15.0,
"1707": 15.0,
"1719": 15.0,
"1730": 15.0,
"1741": 15.0,
"1752": 15.0,
"1763": 15.0,
"1775": 15.0,
"1786": 15.0,
"1797": 14.000000000000002,
"1808": 14.000000000000002,
"1820": 14.000000000000002,
"1831": 14.000000000000002,
"1842": 14.000000000000002,
"1853": 14.000000000000002,
"1865": 14.000000000000002,
"1876": 14.000000000000002,
"1887": 14.000000000000002,
"1898": 14.000000000000002,
"1910": 14.000000000000002,
"1921": 14.000000000000002,
"1932": 14.000000000000002,
"1943": 14.000000000000002,
"1954": 14.000000000000002,
"1966": 13.0,
"1977": 13.0,
"1988": 13.0,
"1999": 13.0,
"2011": 13.0,
"2022": 13.0,
"2033": 13.0,
"2044": 13.0,
"2056": 13.0,
"2067": 13.0,
"2078": 13.0,
"2089": 13.0,
"2100": 13.0,
"2112": 13.0,
"2123": 13.0,
"2134": 13.0,
"2145": 13.0,
"2157": 13.0,
"2168": 13.0,
"2179": 13.0,
"2190": 13.0,
"2202": 13.0,
"2213": 12.0,
"2224": 12.0,
"2235": 12.0,
"2246": 12.0,
"2258": 12.0,
"2269": 12.0,
"2280": 12.0,
"2291": 12.0,
"2303": 12.0,
"2314": 12.0,
"2325": 12.0,
"2336": 12.0,
"2348": 12.0,
"2359": 12.0,
"2370": 12.0,
"2381": 12.0,
"2393": 12.0,
"2404": 12.0,
"2415": 12.0,
"2426": 12.0,
"2437": 11.0,
"2449": 11.0,
"2460": 11.0,
"2471": 11.0,
"2482": 11.0,
"2494": 11.0,
"2505": 11.0,
"2516": 11.0,
"2527": 11.0,
"2539": 11.0,
"2550": 11.0,
"2561": 11.0,
"2572": 11.0,
"2583": 11.0,
"2595": 11.0,
"2606": 11.0,
"2617": 11.0,
"2628": 11.0,
"2640": 11.0,
"2651": 11.0,
"2662": 11.0,
"2673": 11.0,
"2685": 11.0,
"2696": 10.0,
"2707": 10.0,
"2718": 10.0,
"2729": 10.0,
"2741": 10.0,
"2752": 10.0,
"2763": 10.0,
"2774": 10.0,
"2786": 10.0,
"2797": 10.0,
"2808": 10.0,
"2819": 10.0,
"2831": 10.0,
"2842": 10.0,
"2853": 10.0,
"2864": 10.0,
"2876": 10.0,
"2887": 10.0,
"2898": 10.0,
"2909": 10.0,
"2920": 10.0,
"2932": 10.0,
"2943": 10.0,
"2954": 10.0,
"2965": 10.0,
"2977": 9.0,
"2988": 9.0,
"2999": 9.0,
"3010": 9.0,
"3022": 9.0,
"3033": 9.0,
"3044": 9.0,
"3055": 9.0,
"3066": 9.0,
"3078": 9.0,
"3089": 9.0,
"3100": 9.0,
"3111": 9.0,
"3123": 9.0,
"3134": 9.0,
"3145": 9.0,
"3156": 9.0,
"3168": 9.0,
"3179": 9.0,
"3190": 9.0,
"3201": 9.0,
"3212": 9.0,
"3224": 9.0,
"3235": 9.0,
"3246": 9.0,
"3257": 9.0,
"3269": 9.0,
"3280": 9.0,
"3291": 9.0,
"3302": 8.0,
"3314": 8.0,
"3325": 8.0,
"3336": 8.0,
"3347": 8.0,
"3359": 8.0,
"3370": 8.0,
"3381": 8.0,
"3392": 8.0,
"3403": 8.0,
"3415": 8.0,
"3426": 8.0,
"3437": 8.0,
"3448": 8.0,
"3460": 8.0,
"3471": 8.0,
"3482": 8.0,
"3493": 8.0,
"3505": 8.0,
"3516": 8.0,
"3527": 8.0,
"3538": 8.0,
"3549": 8.0,
"3561": 8.0,
"3572": 8.0,
"3583": 8.0,
"3594": 8.0,
"3606": 8.0,
"3617": 8.0,
"3628": 8.0,
"3639": 8.0,
"3651": 8.0,
"3662": 7.000000000000001,
"3673": 7.000000000000001,
"3684": 7.000000000000001,
"3695": 7.000000000000001,
"3707": 7.000000000000001,
"3718": 7.000000000000001,
"3729": 7.000000000000001,
"3740": 7.000000000000001,
"3752": 7.000000000000001,
"3763": 7.000000000000001,
"3774": 7.000000000000001,
"3785": 7.000000000000001,
"3797": 7.000000000000001,
"3808": 7.000000000000001,
"3819": 7.000000000000001,
"3830": 7.000000000000001,
"3842": 7.000000000000001,
"3853": 7.000000000000001,
"3864": 7.000000000000001,
"3875": 7.000000000000001,
"3886": 7.000000000000001,
"3898": 7.000000000000001,
"3909": 7.000000000000001,
"3920": 6.0,
"3931": 6.0,
"3943": 6.0,
"3954": 6.0,
"3965": 6.0,
"3976": 6.0,
"3988": 6.0,
"3999": 6.0,
"4010": 6.0,
"4021": 6.0,
"4032": 6.0,
"4044": 6.0,
"4055": 6.0,
"4066": 6.0,
"4077": 6.0,
"4089": 6.0,
"4100": 6.0,
"4111": 6.0,
"4122": 6.0,
"4134": 6.0,
"4145": 6.0,
"4156": 6.0,
"4167": 6.0,
"4178": 6.0,
"4190": 6.0,
"4201": 6.0,
"4212": 5.0,
"4223": 5.0,
"4235": 5.0,
"4246": 5.0,
"4257": 5.0,
"4268": 5.0,
"4280": 5.0,
"4291": 5.0,
"4302": 5.0,
"4313": 5.0,
"4324": 5.0,
"4336": 5.0,
"4347": 5.0,
"4358": 5.0,
"4369": 5.0,
"4381": 5.0,
"4392": 5.0,
"4403": 5.0,
"4414": 5.0,
"4426": 5.0,
"4437": 5.0,
"4448": 5.0,
"4459": 5.0,
"4471": 5.0,
"4482": 5.0,
"4493": 5.0,
"4504": 5.0,
"4515": 5.0,
"4527": 4.0,
"4538": 4.0,
"4549": 4.0,
"4560": 4.0,
"4572": 4.0,
"4583": 4.0,
"4594": 4.0,
"4605": 4.0,
"4617": 4.0,
"4628": 4.0,
"4639": 4.0,
"4650": 4.0,
"4661": 4.0,
"4673": 4.0,
"4684": 4.0,
"4695": 4.0,
"4706": 4.0,
"4718": 4.0,
"4729": 4.0,
"4740": 4.0,
"4751": 4.0,
"4763": 4.0,
"4774": 3.0,
"4785": 3.0,
"4796": 3.0,
"4807": 3.0,
"4819": 3.0,
"4830": 3.0,
"4841": 3.0,
"4852": 3.0,
"4864": 3.0,
"4875": 3.0,
"4886": 3.0,
"4897": 3.0,
"4909": 3.0,
"4920": 3.0,
"4931": 3.0,
"4942": 3.0,
"4954": 3.0,
"4965": 3.0,
"4976": 3.0,
"4987": 3.0,
"4998": 3.0,
"5010": 3.0,
"5021": 2.0,
"5032": 2.0,
"5043": 2.0,
"5055": 2.0,
"5066": 2.0,
"5077": 2.0,
"5088": 2.0,
"5100": 2.0,
"5111": 2.0,
"5122": 2.0,
"5133": 2.0,
"5144": 2.0,
"5156": 2.0,
"5167": 2.0,
"5178": 2.0,
"5189": 2.0,
"5201": 2.0,
"5212": 2.0,
"5223": 2.0,
"5234": 2.0,
"5246": 2.0,
"5257": 2.0,
"5268": 1.0,
"5279": 1.0,
"5290": 1.0,
"5302": 1.0,
"5313": 1.0,
"5324": 1.0,
"5335": 1.0,
"5347": 1.0,
"5358": 1.0,
"5369": 1.0,
"5380": 1.0,
"5392": 1.0,
"5403": 1.0,
"5414": 1.0,
"5425": 1.0,
"5437": 1.0,
"5448": 1.0,
"5459": 1.0,
"5470": 1.0,
"5481": 1.0,
"5493": 1.0,
"5504": 1.0,
"5515": 1.0,
"5526": 1.0,
"5538": 1.0,
"5549": 1.0,
"5560": 1.0,
"5571": 1.0,
"5583": 1.0,
"5594": 1.0,
"5605": 1.0
}
},
"mosdepth_cov_dist": {
"HCC1395_BL": {
"0": 100.0,
"2": 100.0,
"5": 100.0,
"7": 100.0,
"9": 100.0,
"12": 100.0,
"14": 100.0,
"16": 100.0,
"19": 100.0,
"21": 100.0,
"23": 100.0,
"26": 100.0,
"28": 100.0,
"30": 100.0,
"32": 100.0,
"35": 100.0,
"37": 99.0,
"39": 99.0,
"42": 99.0,
"44": 99.0,
"46": 99.0,
"49": 99.0,
"51": 98.0,
"53": 98.0,
"56": 98.0,
"58": 97.0,
"60": 97.0,
"63": 96.0,
"65": 95.0,
"67": 95.0,
"70": 94.0,
"72": 93.0,
"74": 92.0,
"77": 91.0,
"79": 90.0,
"81": 89.0,
"83": 89.0,
"86": 87.0,
"88": 86.0,
"90": 85.0,
"93": 83.0,
"95": 82.0,
"97": 81.0,
"100": 79.0,
"102": 78.0,
"104": 77.0,
"107": 75.0,
"109": 74.0,
"111": 73.0,
"114": 71.0,
"116": 70.0,
"118": 68.0,
"121": 67.0,
"123": 65.0,
"125": 64.0,
"128": 62.0,
"130": 61.0,
"132": 60.0,
"134": 59.0,
"137": 56.99999999999999,
"139": 56.00000000000001,
"141": 55.00000000000001,
"144": 53.0,
"146": 52.0,
"148": 50.0,
"151": 49.0,
"153": 48.0,
"155": 47.0,
"158": 45.0,
"160": 44.0,
"162": 43.0,
"165": 42.0,
"167": 41.0,
"169": 40.0,
"172": 38.0,
"174": 38.0,
"176": 37.0,
"179": 35.0,
"181": 35.0,
"183": 34.0,
"185": 33.0,
"188": 32.0,
"190": 31.0,
"192": 30.0,
"195": 28.999999999999996,
"197": 28.999999999999996,
"199": 28.000000000000004,
"202": 27.0,
"204": 26.0,
"206": 26.0,
"209": 25.0,
"211": 25.0,
"213": 24.0,
"216": 23.0,
"218": 23.0,
"220": 22.0,
"223": 22.0,
"225": 21.0,
"227": 21.0,
"230": 20.0,
"232": 20.0,
"234": 20.0,
"237": 19.0,
"239": 19.0,
"241": 19.0,
"243": 18.0,
"246": 18.0,
"248": 18.0,
"250": 18.0,
"253": 17.0,
"255": 17.0,
"257": 17.0,
"260": 17.0,
"262": 16.0,
"264": 16.0,
"267": 16.0,
"269": 16.0,
"271": 16.0,
"274": 16.0,
"276": 16.0,
"278": 15.0,
"281": 15.0,
"283": 15.0,
"285": 15.0,
"288": 15.0,
"290": 15.0,
"292": 15.0,
"294": 15.0,
"297": 15.0,
"299": 15.0,
"301": 15.0,
"304": 15.0,
"306": 14.000000000000002,
"308": 14.000000000000002,
"311": 14.000000000000002,
"313": 14.000000000000002,
"315": 14.000000000000002,
"318": 14.000000000000002,
"320": 14.000000000000002,
"322": 14.000000000000002,
"325": 14.000000000000002,
"327": 14.000000000000002,
"329": 14.000000000000002,
"332": 14.000000000000002,
"334": 14.000000000000002,
"336": 14.000000000000002,
"339": 14.000000000000002,
"341": 14.000000000000002,
"343": 14.000000000000002,
"345": 13.0,
"348": 13.0,
"350": 13.0,
"352": 13.0,
"355": 13.0,
"357": 13.0,
"359": 13.0,
"362": 13.0,
"364": 13.0,
"366": 13.0,
"369": 13.0,
"371": 13.0,
"373": 13.0,
"376": 13.0,
"378": 13.0,
"380": 13.0,
"383": 13.0,
"385": 13.0,
"387": 13.0,
"390": 13.0,
"392": 13.0,
"394": 13.0,
"396": 13.0,
"399": 13.0,
"401": 13.0,
"403": 13.0,
"406": 13.0,
"408": 13.0,
"410": 13.0,
"413": 13.0,
"415": 12.0,
"417": 12.0,
"420": 12.0,
"422": 12.0,
"424": 12.0,
"427": 12.0,
"429": 12.0,
"431": 12.0,
"434": 12.0,
"436": 12.0,
"438": 12.0,
"441": 12.0,
"443": 12.0,
"445": 12.0,
"447": 12.0,
"450": 12.0,
"452": 12.0,
"454": 12.0,
"457": 12.0,
"459": 12.0,
"461": 12.0,
"464": 12.0,
"466": 12.0,
"468": 12.0,
"471": 12.0,
"473": 12.0,
"475": 12.0,
"478": 12.0,
"480": 12.0,
"482": 12.0,
"485": 12.0,
"487": 12.0,
"489": 12.0,
"492": 12.0,
"494": 12.0,
"496": 12.0,
"499": 12.0,
"501": 12.0,
"503": 12.0,
"505": 12.0,
"508": 12.0,
"510": 12.0,
"512": 12.0,
"515": 12.0,
"517": 12.0,
"519": 11.0,
"522": 11.0,
"524": 11.0,
"526": 11.0,
"529": 11.0,
"531": 11.0,
"533": 11.0,
"536": 11.0,
"538": 11.0,
"540": 11.0,
"543": 11.0,
"545": 11.0,
"547": 11.0,
"550": 11.0,
"552": 11.0,
"554": 11.0,
"556": 11.0,
"559": 11.0,
"561": 11.0,
"563": 11.0,
"566": 11.0,
"568": 11.0,
"570": 11.0,
"573": 11.0,
"575": 11.0,
"577": 11.0,
"580": 11.0,
"582": 11.0,
"584": 11.0,
"587": 11.0,
"589": 11.0,
"591": 11.0,
"594": 11.0,
"596": 11.0,
"598": 11.0,
"601": 11.0,
"603": 11.0,
"605": 11.0,
"607": 11.0,
"610": 10.0,
"612": 10.0,
"614": 10.0,
"617": 10.0,
"619": 10.0,
"621": 10.0,
"624": 10.0,
"626": 10.0,
"628": 10.0,
"631": 10.0,
"633": 10.0,
"635": 10.0,
"638": 10.0,
"640": 10.0,
"642": 10.0,
"645": 10.0,
"647": 10.0,
"649": 10.0,
"652": 10.0,
"654": 10.0,
"656": 10.0,
"658": 10.0,
"661": 10.0,
"663": 10.0,
"665": 10.0,
"668": 9.0,
"670": 9.0,
"672": 9.0,
"675": 9.0,
"677": 9.0,
"679": 9.0,
"682": 9.0,
"684": 9.0,
"686": 9.0,
"689": 9.0,
"691": 9.0,
"693": 9.0,
"696": 9.0,
"698": 9.0,
"700": 9.0,
"703": 9.0,
"705": 9.0,
"707": 9.0,
"710": 9.0,
"712": 9.0,
"714": 9.0,
"716": 9.0,
"719": 9.0,
"721": 9.0,
"723": 9.0,
"726": 8.0,
"728": 8.0,
"730": 8.0,
"733": 8.0,
"735": 8.0,
"737": 8.0,
"740": 8.0,
"742": 8.0,
"744": 8.0,
"747": 8.0,
"749": 8.0,
"751": 8.0,
"754": 8.0,
"756": 8.0,
"758": 8.0,
"761": 8.0,
"763": 8.0,
"765": 8.0,
"767": 8.0,
"770": 8.0,
"772": 8.0,
"774": 8.0,
"777": 8.0,
"779": 8.0,
"781": 7.000000000000001,
"784": 7.000000000000001,
"786": 7.000000000000001,
"788": 7.000000000000001,
"791": 7.000000000000001,
"793": 7.000000000000001,
"795": 7.000000000000001,
"798": 7.000000000000001,
"800": 7.000000000000001,
"802": 7.000000000000001,
"805": 7.000000000000001,
"807": 7.000000000000001,
"809": 7.000000000000001,
"812": 7.000000000000001,
"814": 7.000000000000001,
"816": 7.000000000000001,
"818": 7.000000000000001,
"821": 7.000000000000001,
"823": 7.000000000000001,
"825": 7.000000000000001,
"828": 6.0,
"830": 6.0,
"832": 6.0,
"835": 6.0,
"837": 6.0,
"839": 6.0,
"842": 6.0,
"844": 6.0,
"846": 6.0,
"849": 6.0,
"851": 6.0,
"853": 6.0,
"856": 6.0,
"858": 6.0,
"860": 6.0,
"863": 6.0,
"865": 6.0,
"867": 6.0,
"869": 5.0,
"872": 5.0,
"874": 5.0,
"876": 5.0,
"879": 5.0,
"881": 5.0,
"883": 5.0,
"886": 5.0,
"888": 5.0,
"890": 5.0,
"893": 5.0,
"895": 5.0,
"897": 5.0,
"900": 5.0,
"902": 5.0,
"904": 5.0,
"907": 5.0,
"909": 5.0,
"911": 5.0,
"914": 5.0,
"916": 4.0,
"918": 4.0,
"920": 4.0,
"923": 4.0,
"925": 4.0,
"927": 4.0,
"930": 4.0,
"932": 4.0,
"934": 4.0,
"937": 4.0,
"939": 4.0,
"941": 4.0,
"944": 4.0,
"946": 4.0,
"948": 4.0,
"951": 4.0,
"953": 4.0,
"955": 4.0,
"958": 4.0,
"960": 4.0,
"962": 4.0,
"965": 3.0,
"967": 3.0,
"969": 3.0,
"972": 3.0,
"974": 3.0,
"976": 3.0,
"978": 3.0,
"981": 3.0,
"983": 3.0,
"985": 3.0,
"988": 3.0,
"990": 3.0,
"992": 3.0,
"995": 3.0,
"997": 3.0,
"999": 3.0,
"1002": 3.0,
"1004": 3.0,
"1006": 3.0,
"1009": 3.0,
"1011": 3.0,
"1013": 2.0,
"1016": 2.0,
"1018": 2.0,
"1020": 2.0,
"1023": 2.0,
"1025": 2.0,
"1027": 2.0,
"1029": 2.0,
"1032": 2.0,
"1034": 2.0,
"1036": 2.0,
"1039": 2.0,
"1041": 2.0,
"1043": 2.0,
"1046": 2.0,
"1048": 2.0,
"1050": 2.0,
"1053": 2.0,
"1055": 2.0,
"1057": 2.0,
"1060": 2.0,
"1062": 2.0,
"1064": 2.0,
"1067": 2.0,
"1069": 2.0,
"1071": 2.0,
"1074": 1.0,
"1076": 1.0,
"1078": 1.0,
"1080": 1.0,
"1083": 1.0,
"1085": 1.0,
"1087": 1.0,
"1090": 1.0,
"1092": 1.0,
"1094": 1.0,
"1097": 1.0,
"1099": 1.0,
"1101": 1.0,
"1104": 1.0,
"1106": 1.0,
"1108": 1.0,
"1111": 1.0,
"1113": 1.0,
"1115": 1.0,
"1118": 1.0,
"1120": 1.0,
"1122": 1.0,
"1125": 1.0,
"1127": 1.0,
"1129": 1.0,
"1131": 1.0,
"1134": 1.0,
"1136": 1.0,
"1138": 1.0,
"1141": 1.0,
"1143": 1.0,
"1145": 1.0,
"1148": 1.0,
"1150": 1.0,
"1152": 1.0,
"1155": 1.0,
"1157": 1.0
},
"HCC1395_tumor": {
"0": 100.0,
"3": 100.0,
"7": 100.0,
"10": 100.0,
"13": 100.0,
"16": 100.0,
"20": 100.0,
"23": 100.0,
"26": 100.0,
"30": 100.0,
"33": 100.0,
"36": 100.0,
"40": 100.0,
"43": 100.0,
"46": 100.0,
"49": 100.0,
"53": 100.0,
"56": 100.0,
"59": 100.0,
"63": 100.0,
"66": 100.0,
"69": 100.0,
"72": 99.0,
"76": 99.0,
"79": 99.0,
"82": 99.0,
"86": 99.0,
"89": 99.0,
"92": 99.0,
"95": 99.0,
"99": 99.0,
"102": 98.0,
"105": 98.0,
"109": 98.0,
"112": 98.0,
"115": 97.0,
"119": 97.0,
"122": 97.0,
"125": 97.0,
"128": 96.0,
"132": 96.0,
"135": 96.0,
"138": 95.0,
"142": 95.0,
"145": 95.0,
"148": 94.0,
"151": 94.0,
"155": 93.0,
"158": 93.0,
"161": 92.0,
"165": 92.0,
"168": 91.0,
"171": 91.0,
"175": 90.0,
"178": 89.0,
"181": 89.0,
"184": 88.0,
"188": 87.0,
"191": 87.0,
"194": 86.0,
"198": 85.0,
"201": 84.0,
"204": 83.0,
"207": 83.0,
"211": 82.0,
"214": 81.0,
"217": 80.0,
"221": 79.0,
"224": 78.0,
"227": 78.0,
"230": 77.0,
"234": 76.0,
"237": 75.0,
"240": 74.0,
"244": 73.0,
"247": 72.0,
"250": 71.0,
"254": 70.0,
"257": 70.0,
"260": 69.0,
"263": 68.0,
"267": 67.0,
"270": 66.0,
"273": 65.0,
"277": 64.0,
"280": 63.0,
"283": 62.0,
"286": 62.0,
"290": 61.0,
"293": 60.0,
"296": 59.0,
"300": 57.99999999999999,
"303": 56.99999999999999,
"306": 56.99999999999999,
"310": 56.00000000000001,
"313": 55.00000000000001,
"316": 54.0,
"319": 53.0,
"323": 52.0,
"326": 52.0,
"329": 51.0,
"333": 50.0,
"336": 49.0,
"339": 49.0,
"342": 48.0,
"346": 47.0,
"349": 46.0,
"352": 45.0,
"356": 45.0,
"359": 44.0,
"362": 43.0,
"365": 43.0,
"369": 42.0,
"372": 41.0,
"375": 41.0,
"379": 40.0,
"382": 39.0,
"385": 39.0,
"389": 38.0,
"392": 37.0,
"395": 37.0,
"398": 36.0,
"402": 36.0,
"405": 35.0,
"408": 34.0,
"412": 34.0,
"415": 33.0,
"418": 33.0,
"421": 32.0,
"425": 32.0,
"428": 31.0,
"431": 31.0,
"435": 30.0,
"438": 30.0,
"441": 28.999999999999996,
"444": 28.999999999999996,
"448": 28.000000000000004,
"451": 28.000000000000004,
"454": 27.0,
"458": 27.0,
"461": 26.0,
"464": 26.0,
"468": 26.0,
"471": 25.0,
"474": 25.0,
"477": 25.0,
"481": 24.0,
"484": 24.0,
"487": 23.0,
"491": 23.0,
"494": 23.0,
"497": 23.0,
"500": 22.0,
"504": 22.0,
"507": 22.0,
"510": 21.0,
"514": 21.0,
"517": 21.0,
"520": 21.0,
"524": 20.0,
"527": 20.0,
"530": 20.0,
"533": 20.0,
"537": 19.0,
"540": 19.0,
"543": 19.0,
"547": 19.0,
"550": 19.0,
"553": 19.0,
"556": 18.0,
"560": 18.0,
"563": 18.0,
"566": 18.0,
"570": 18.0,
"573": 17.0,
"576": 17.0,
"579": 17.0,
"583": 17.0,
"586": 17.0,
"589": 17.0,
"593": 17.0,
"596": 16.0,
"599": 16.0,
"603": 16.0,
"606": 16.0,
"609": 16.0,
"612": 16.0,
"616": 16.0,
"619": 16.0,
"622": 16.0,
"626": 15.0,
"629": 15.0,
"632": 15.0,
"635": 15.0,
"639": 15.0,
"642": 15.0,
"645": 15.0,
"649": 15.0,
"652": 15.0,
"655": 15.0,
"659": 15.0,
"662": 14.000000000000002,
"665": 14.000000000000002,
"668": 14.000000000000002,
"672": 14.000000000000002,
"675": 14.000000000000002,
"678": 14.000000000000002,
"682": 14.000000000000002,
"685": 14.000000000000002,
"688": 14.000000000000002,
"691": 14.000000000000002,
"695": 14.000000000000002,
"698": 13.0,
"701": 13.0,
"705": 13.0,
"708": 13.0,
"711": 13.0,
"714": 13.0,
"718": 13.0,
"721": 13.0,
"724": 13.0,
"728": 13.0,
"731": 13.0,
"734": 13.0,
"738": 13.0,
"741": 13.0,
"744": 12.0,
"747": 12.0,
"751": 12.0,
"754": 12.0,
"757": 12.0,
"761": 12.0,
"764": 12.0,
"767": 12.0,
"770": 12.0,
"774": 12.0,
"777": 12.0,
"780": 12.0,
"784": 12.0,
"787": 12.0,
"790": 12.0,
"794": 12.0,
"797": 12.0,
"800": 12.0,
"803": 12.0,
"807": 12.0,
"810": 12.0,
"813": 12.0,
"817": 12.0,
"820": 12.0,
"823": 12.0,
"826": 12.0,
"830": 12.0,
"833": 12.0,
"836": 12.0,
"840": 11.0,
"843": 11.0,
"846": 11.0,
"849": 11.0,
"853": 11.0,
"856": 11.0,
"859": 11.0,
"863": 11.0,
"866": 11.0,
"869": 11.0,
"873": 11.0,
"876": 11.0,
"879": 11.0,
"882": 11.0,
"886": 11.0,
"889": 11.0,
"892": 11.0,
"896": 11.0,
"899": 11.0,
"902": 11.0,
"905": 11.0,
"909": 11.0,
"912": 11.0,
"915": 11.0,
"919": 11.0,
"922": 11.0,
"925": 11.0,
"929": 11.0,
"932": 11.0,
"935": 11.0,
"938": 11.0,
"942": 11.0,
"945": 11.0,
"948": 10.0,
"952": 10.0,
"955": 10.0,
"958": 10.0,
"961": 10.0,
"965": 10.0,
"968": 10.0,
"971": 10.0,
"975": 10.0,
"978": 10.0,
"981": 10.0,
"984": 10.0,
"988": 10.0,
"991": 10.0,
"994": 10.0,
"998": 10.0,
"1001": 10.0,
"1004": 10.0,
"1008": 10.0,
"1011": 10.0,
"1014": 10.0,
"1017": 10.0,
"1021": 10.0,
"1024": 10.0,
"1027": 10.0,
"1031": 10.0,
"1034": 10.0,
"1037": 10.0,
"1040": 10.0,
"1044": 10.0,
"1047": 10.0,
"1050": 10.0,
"1054": 10.0,
"1057": 9.0,
"1060": 9.0,
"1064": 9.0,
"1067": 9.0,
"1070": 9.0,
"1073": 9.0,
"1077": 9.0,
"1080": 9.0,
"1083": 9.0,
"1087": 9.0,
"1090": 9.0,
"1093": 9.0,
"1096": 9.0,
"1100": 9.0,
"1103": 9.0,
"1106": 9.0,
"1110": 9.0,
"1113": 9.0,
"1116": 9.0,
"1119": 9.0,
"1123": 9.0,
"1126": 9.0,
"1129": 9.0,
"1133": 9.0,
"1136": 9.0,
"1139": 8.0,
"1143": 8.0,
"1146": 8.0,
"1149": 8.0,
"1152": 8.0,
"1156": 8.0,
"1159": 8.0,
"1162": 8.0,
"1166": 8.0,
"1169": 8.0,
"1172": 8.0,
"1175": 8.0,
"1179": 8.0,
"1182": 8.0,
"1185": 8.0,
"1189": 8.0,
"1192": 8.0,
"1195": 8.0,
"1199": 8.0,
"1202": 8.0,
"1205": 8.0,
"1208": 8.0,
"1212": 8.0,
"1215": 8.0,
"1218": 7.000000000000001,
"1222": 7.000000000000001,
"1225": 7.000000000000001,
"1228": 7.000000000000001,
"1231": 7.000000000000001,
"1235": 7.000000000000001,
"1238": 7.000000000000001,
"1241": 7.000000000000001,
"1245": 7.000000000000001,
"1248": 7.000000000000001,
"1251": 7.000000000000001,
"1254": 7.000000000000001,
"1258": 7.000000000000001,
"1261": 7.000000000000001,
"1264": 7.000000000000001,
"1268": 7.000000000000001,
"1271": 7.000000000000001,
"1274": 7.000000000000001,
"1278": 7.000000000000001,
"1281": 7.000000000000001,
"1284": 7.000000000000001,
"1287": 7.000000000000001,
"1291": 7.000000000000001,
"1294": 7.000000000000001,
"1297": 6.0,
"1301": 6.0,
"1304": 6.0,
"1307": 6.0,
"1310": 6.0,
"1314": 6.0,
"1317": 6.0,
"1320": 6.0,
"1324": 6.0,
"1327": 6.0,
"1330": 6.0,
"1333": 6.0,
"1337": 6.0,
"1340": 6.0,
"1343": 6.0,
"1347": 6.0,
"1350": 6.0,
"1353": 6.0,
"1357": 5.0,
"1360": 5.0,
"1363": 5.0,
"1366": 5.0,
"1370": 5.0,
"1373": 5.0,
"1376": 5.0,
"1380": 5.0,
"1383": 5.0,
"1386": 5.0,
"1389": 5.0,
"1393": 5.0,
"1396": 5.0,
"1399": 5.0,
"1403": 5.0,
"1406": 5.0,
"1409": 5.0,
"1413": 4.0,
"1416": 4.0,
"1419": 4.0,
"1422": 4.0,
"1426": 4.0,
"1429": 4.0,
"1432": 4.0,
"1436": 4.0,
"1439": 4.0,
"1442": 4.0,
"1445": 4.0,
"1449": 4.0,
"1452": 4.0,
"1455": 4.0,
"1459": 3.0,
"1462": 3.0,
"1465": 3.0,
"1468": 3.0,
"1472": 3.0,
"1475": 3.0,
"1478": 3.0,
"1482": 3.0,
"1485": 3.0,
"1488": 3.0,
"1492": 3.0,
"1495": 3.0,
"1498": 3.0,
"1501": 3.0,
"1505": 3.0,
"1508": 3.0,
"1511": 2.0,
"1515": 2.0,
"1518": 2.0,
"1521": 2.0,
"1524": 2.0,
"1528": 2.0,
"1531": 2.0,
"1534": 2.0,
"1538": 2.0,
"1541": 2.0,
"1544": 2.0,
"1548": 2.0,
"1551": 2.0,
"1554": 2.0,
"1557": 2.0,
"1561": 2.0,
"1564": 2.0,
"1567": 1.0,
"1571": 1.0,
"1574": 1.0,
"1577": 1.0,
"1580": 1.0,
"1584": 1.0,
"1587": 1.0,
"1590": 1.0,
"1594": 1.0,
"1597": 1.0,
"1600": 1.0,
"1603": 1.0,
"1607": 1.0,
"1610": 1.0,
"1613": 1.0,
"1617": 1.0,
"1620": 1.0,
"1623": 1.0,
"1627": 1.0,
"1630": 1.0,
"1633": 1.0,
"1636": 1.0,
"1640": 1.0,
"1643": 1.0
},
"Sig_18_Blood": {
"0": 100.0,
"4": 100.0,
"7": 100.0,
"11": 100.0,
"15": 100.0,
"19": 100.0,
"22": 100.0,
"26": 100.0,
"30": 100.0,
"34": 100.0,
"37": 100.0,
"41": 100.0,
"45": 100.0,
"48": 100.0,
"52": 99.0,
"56": 99.0,
"60": 99.0,
"63": 99.0,
"67": 99.0,
"71": 98.0,
"74": 98.0,
"78": 97.0,
"82": 97.0,
"86": 96.0,
"89": 95.0,
"93": 94.0,
"97": 93.0,
"101": 92.0,
"104": 91.0,
"108": 90.0,
"112": 88.0,
"115": 87.0,
"119": 85.0,
"123": 84.0,
"127": 82.0,
"130": 80.0,
"134": 79.0,
"138": 77.0,
"141": 75.0,
"145": 73.0,
"149": 71.0,
"153": 69.0,
"156": 68.0,
"160": 66.0,
"164": 64.0,
"168": 62.0,
"171": 61.0,
"175": 59.0,
"179": 56.99999999999999,
"182": 55.00000000000001,
"186": 54.0,
"190": 52.0,
"194": 50.0,
"197": 49.0,
"201": 47.0,
"205": 46.0,
"209": 44.0,
"212": 43.0,
"216": 41.0,
"220": 40.0,
"223": 39.0,
"227": 38.0,
"231": 36.0,
"235": 35.0,
"238": 34.0,
"242": 33.0,
"246": 32.0,
"249": 31.0,
"253": 30.0,
"257": 28.999999999999996,
"261": 28.000000000000004,
"264": 27.0,
"268": 26.0,
"272": 26.0,
"276": 25.0,
"279": 24.0,
"283": 24.0,
"287": 23.0,
"290": 22.0,
"294": 22.0,
"298": 21.0,
"302": 21.0,
"305": 20.0,
"309": 20.0,
"313": 19.0,
"316": 19.0,
"320": 19.0,
"324": 18.0,
"328": 18.0,
"331": 18.0,
"335": 18.0,
"339": 17.0,
"343": 17.0,
"346": 17.0,
"350": 17.0,
"354": 17.0,
"357": 16.0,
"361": 16.0,
"365": 16.0,
"369": 16.0,
"372": 16.0,
"376": 15.0,
"380": 15.0,
"384": 15.0,
"387": 15.0,
"391": 15.0,
"395": 15.0,
"398": 15.0,
"402": 15.0,
"406": 15.0,
"410": 14.000000000000002,
"413": 14.000000000000002,
"417": 14.000000000000002,
"421": 14.000000000000002,
"424": 14.000000000000002,
"428": 14.000000000000002,
"432": 14.000000000000002,
"436": 14.000000000000002,
"439": 14.000000000000002,
"443": 14.000000000000002,
"447": 14.000000000000002,
"451": 14.000000000000002,
"454": 14.000000000000002,
"458": 14.000000000000002,
"462": 14.000000000000002,
"465": 14.000000000000002,
"469": 14.000000000000002,
"473": 14.000000000000002,
"477": 14.000000000000002,
"480": 13.0,
"484": 13.0,
"488": 13.0,
"491": 13.0,
"495": 13.0,
"499": 13.0,
"503": 13.0,
"506": 13.0,
"510": 13.0,
"514": 13.0,
"518": 13.0,
"521": 13.0,
"525": 13.0,
"529": 13.0,
"532": 13.0,
"536": 13.0,
"540": 13.0,
"544": 13.0,
"547": 13.0,
"551": 13.0,
"555": 13.0,
"559": 13.0,
"562": 13.0,
"566": 13.0,
"570": 13.0,
"573": 13.0,
"577": 13.0,
"581": 13.0,
"585": 13.0,
"588": 13.0,
"592": 13.0,
"596": 13.0,
"599": 13.0,
"603": 12.0,
"607": 12.0,
"611": 12.0,
"614": 12.0,
"618": 12.0,
"622": 12.0,
"626": 12.0,
"629": 12.0,
"633": 12.0,
"637": 12.0,
"640": 12.0,
"644": 12.0,
"648": 12.0,
"652": 12.0,
"655": 12.0,
"659": 12.0,
"663": 12.0,
"666": 12.0,
"670": 12.0,
"674": 12.0,
"678": 12.0,
"681": 12.0,
"685": 12.0,
"689": 12.0,
"693": 12.0,
"696": 12.0,
"700": 12.0,
"704": 12.0,
"707": 12.0,
"711": 12.0,
"715": 12.0,
"719": 12.0,
"722": 12.0,
"726": 12.0,
"730": 12.0,
"734": 12.0,
"737": 12.0,
"741": 12.0,
"745": 12.0,
"748": 12.0,
"752": 12.0,
"756": 12.0,
"760": 12.0,
"763": 11.0,
"767": 11.0,
"771": 11.0,
"774": 11.0,
"778": 11.0,
"782": 11.0,
"786": 11.0,
"789": 11.0,
"793": 11.0,
"797": 11.0,
"801": 11.0,
"804": 11.0,
"808": 11.0,
"812": 11.0,
"815": 11.0,
"819": 11.0,
"823": 11.0,
"827": 11.0,
"830": 11.0,
"834": 11.0,
"838": 11.0,
"841": 11.0,
"845": 11.0,
"849": 11.0,
"853": 11.0,
"856": 11.0,
"860": 11.0,
"864": 11.0,
"868": 11.0,
"871": 11.0,
"875": 11.0,
"879": 11.0,
"882": 11.0,
"886": 11.0,
"890": 11.0,
"894": 11.0,
"897": 11.0,
"901": 11.0,
"905": 10.0,
"909": 10.0,
"912": 10.0,
"916": 10.0,
"920": 10.0,
"923": 10.0,
"927": 10.0,
"931": 10.0,
"935": 10.0,
"938": 10.0,
"942": 10.0,
"946": 10.0,
"949": 10.0,
"953": 10.0,
"957": 10.0,
"961": 10.0,
"964": 10.0,
"968": 10.0,
"972": 10.0,
"976": 10.0,
"979": 10.0,
"983": 10.0,
"987": 10.0,
"990": 10.0,
"994": 9.0,
"998": 9.0,
"1002": 9.0,
"1005": 9.0,
"1009": 9.0,
"1013": 9.0,
"1017": 9.0,
"1020": 9.0,
"1024": 9.0,
"1028": 9.0,
"1031": 9.0,
"1035": 9.0,
"1039": 9.0,
"1043": 9.0,
"1046": 9.0,
"1050": 9.0,
"1054": 9.0,
"1057": 9.0,
"1061": 9.0,
"1065": 9.0,
"1069": 9.0,
"1072": 9.0,
"1076": 9.0,
"1080": 9.0,
"1084": 9.0,
"1087": 9.0,
"1091": 9.0,
"1095": 9.0,
"1098": 9.0,
"1102": 8.0,
"1106": 8.0,
"1110": 8.0,
"1113": 8.0,
"1117": 8.0,
"1121": 8.0,
"1124": 8.0,
"1128": 8.0,
"1132": 8.0,
"1136": 8.0,
"1139": 8.0,
"1143": 8.0,
"1147": 8.0,
"1151": 8.0,
"1154": 8.0,
"1158": 8.0,
"1162": 8.0,
"1165": 8.0,
"1169": 8.0,
"1173": 8.0,
"1177": 8.0,
"1180": 8.0,
"1184": 8.0,
"1188": 8.0,
"1192": 8.0,
"1195": 8.0,
"1199": 8.0,
"1203": 8.0,
"1206": 8.0,
"1210": 8.0,
"1214": 8.0,
"1218": 8.0,
"1221": 8.0,
"1225": 7.000000000000001,
"1229": 7.000000000000001,
"1232": 7.000000000000001,
"1236": 7.000000000000001,
"1240": 7.000000000000001,
"1244": 7.000000000000001,
"1247": 7.000000000000001,
"1251": 7.000000000000001,
"1255": 7.000000000000001,
"1259": 7.000000000000001,
"1262": 7.000000000000001,
"1266": 7.000000000000001,
"1270": 7.000000000000001,
"1273": 7.000000000000001,
"1277": 7.000000000000001,
"1281": 7.000000000000001,
"1285": 7.000000000000001,
"1288": 7.000000000000001,
"1292": 7.000000000000001,
"1296": 7.000000000000001,
"1299": 7.000000000000001,
"1303": 7.000000000000001,
"1307": 7.000000000000001,
"1311": 7.000000000000001,
"1314": 7.000000000000001,
"1318": 6.0,
"1322": 6.0,
"1326": 6.0,
"1329": 6.0,
"1333": 6.0,
"1337": 6.0,
"1340": 6.0,
"1344": 6.0,
"1348": 6.0,
"1352": 6.0,
"1355": 6.0,
"1359": 6.0,
"1363": 6.0,
"1367": 6.0,
"1370": 6.0,
"1374": 6.0,
"1378": 6.0,
"1381": 6.0,
"1385": 6.0,
"1389": 6.0,
"1393": 5.0,
"1396": 5.0,
"1400": 5.0,
"1404": 5.0,
"1407": 5.0,
"1411": 5.0,
"1415": 5.0,
"1419": 5.0,
"1422": 5.0,
"1426": 5.0,
"1430": 5.0,
"1434": 5.0,
"1437": 5.0,
"1441": 5.0,
"1445": 5.0,
"1448": 5.0,
"1452": 5.0,
"1456": 5.0,
"1460": 5.0,
"1463": 4.0,
"1467": 4.0,
"1471": 4.0,
"1474": 4.0,
"1478": 4.0,
"1482": 4.0,
"1486": 4.0,
"1489": 4.0,
"1493": 4.0,
"1497": 4.0,
"1501": 4.0,
"1504": 4.0,
"1508": 4.0,
"1512": 4.0,
"1515": 4.0,
"1519": 4.0,
"1523": 4.0,
"1527": 4.0,
"1530": 4.0,
"1534": 4.0,
"1538": 3.0,
"1542": 3.0,
"1545": 3.0,
"1549": 3.0,
"1553": 3.0,
"1556": 3.0,
"1560": 3.0,
"1564": 3.0,
"1568": 3.0,
"1571": 3.0,
"1575": 3.0,
"1579": 3.0,
"1582": 3.0,
"1586": 3.0,
"1590": 3.0,
"1594": 3.0,
"1597": 3.0,
"1601": 3.0,
"1605": 2.0,
"1609": 2.0,
"1612": 2.0,
"1616": 2.0,
"1620": 2.0,
"1623": 2.0,
"1627": 2.0,
"1631": 2.0,
"1635": 2.0,
"1638": 2.0,
"1642": 2.0,
"1646": 2.0,
"1649": 2.0,
"1653": 2.0,
"1657": 2.0,
"1661": 2.0,
"1664": 2.0,
"1668": 2.0,
"1672": 2.0,
"1676": 2.0,
"1679": 2.0,
"1683": 2.0,
"1687": 2.0,
"1690": 1.0,
"1694": 1.0,
"1698": 1.0,
"1702": 1.0,
"1705": 1.0,
"1709": 1.0,
"1713": 1.0,
"1717": 1.0,
"1720": 1.0,
"1724": 1.0,
"1728": 1.0,
"1731": 1.0,
"1735": 1.0,
"1739": 1.0,
"1743": 1.0,
"1746": 1.0,
"1750": 1.0,
"1754": 1.0,
"1757": 1.0,
"1761": 1.0,
"1765": 1.0,
"1769": 1.0,
"1772": 1.0,
"1776": 1.0,
"1780": 1.0,
"1784": 1.0,
"1787": 1.0,
"1791": 1.0,
"1795": 1.0,
"1798": 1.0,
"1802": 1.0,
"1806": 1.0,
"1810": 1.0,
"1813": 1.0,
"1817": 1.0,
"1821": 1.0,
"1824": 1.0,
"1828": 1.0,
"1832": 1.0,
"1836": 1.0,
"1839": 1.0,
"1843": 1.0,
"1847": 1.0,
"1851": 1.0,
"1854": 1.0,
"1858": 1.0
},
"Sig_18_tissue": {
"0": 100.0,
"11": 100.0,
"22": 100.0,
"34": 100.0,
"45": 100.0,
"56": 100.0,
"67": 100.0,
"79": 100.0,
"90": 100.0,
"101": 100.0,
"112": 100.0,
"124": 100.0,
"135": 100.0,
"146": 100.0,
"157": 100.0,
"168": 100.0,
"180": 99.0,
"191": 99.0,
"202": 99.0,
"213": 99.0,
"225": 99.0,
"236": 99.0,
"247": 98.0,
"258": 98.0,
"270": 98.0,
"281": 97.0,
"292": 97.0,
"303": 96.0,
"315": 96.0,
"326": 95.0,
"337": 95.0,
"348": 94.0,
"359": 93.0,
"371": 92.0,
"382": 91.0,
"393": 91.0,
"404": 90.0,
"416": 89.0,
"427": 88.0,
"438": 87.0,
"449": 86.0,
"461": 85.0,
"472": 84.0,
"483": 83.0,
"494": 82.0,
"505": 81.0,
"517": 80.0,
"528": 79.0,
"539": 78.0,
"550": 77.0,
"562": 76.0,
"573": 75.0,
"584": 74.0,
"595": 73.0,
"607": 72.0,
"618": 71.0,
"629": 70.0,
"640": 69.0,
"651": 68.0,
"663": 67.0,
"674": 66.0,
"685": 65.0,
"696": 64.0,
"708": 62.0,
"719": 61.0,
"730": 60.0,
"741": 59.0,
"753": 57.99999999999999,
"764": 56.99999999999999,
"775": 56.00000000000001,
"786": 55.00000000000001,
"798": 53.0,
"809": 52.0,
"820": 51.0,
"831": 50.0,
"842": 49.0,
"854": 48.0,
"865": 47.0,
"876": 46.0,
"887": 46.0,
"899": 45.0,
"910": 44.0,
"921": 43.0,
"932": 42.0,
"944": 41.0,
"955": 40.0,
"966": 39.0,
"977": 39.0,
"988": 38.0,
"1000": 37.0,
"1011": 36.0,
"1022": 36.0,
"1033": 35.0,
"1045": 34.0,
"1056": 34.0,
"1067": 33.0,
"1078": 32.0,
"1090": 32.0,
"1101": 31.0,
"1112": 30.0,
"1123": 30.0,
"1134": 28.999999999999996,
"1146": 28.999999999999996,
"1157": 28.000000000000004,
"1168": 28.000000000000004,
"1179": 27.0,
"1191": 27.0,
"1202": 26.0,
"1213": 26.0,
"1224": 25.0,
"1236": 25.0,
"1247": 25.0,
"1258": 24.0,
"1269": 24.0,
"1281": 23.0,
"1292": 23.0,
"1303": 23.0,
"1314": 22.0,
"1325": 22.0,
"1337": 22.0,
"1348": 21.0,
"1359": 21.0,
"1370": 21.0,
"1382": 20.0,
"1393": 20.0,
"1404": 20.0,
"1415": 20.0,
"1427": 19.0,
"1438": 19.0,
"1449": 19.0,
"1460": 19.0,
"1471": 18.0,
"1483": 18.0,
"1494": 18.0,
"1505": 18.0,
"1516": 18.0,
"1528": 17.0,
"1539": 17.0,
"1550": 17.0,
"1561": 17.0,
"1573": 17.0,
"1584": 17.0,
"1595": 16.0,
"1606": 16.0,
"1617": 16.0,
"1629": 16.0,
"1640": 16.0,
"1651": 16.0,
"1662": 16.0,
"1674": 15.0,
"1685": 15.0,
"1696": 15.0,
"1707": 15.0,
"1719": 15.0,
"1730": 15.0,
"1741": 15.0,
"1752": 15.0,
"1763": 15.0,
"1775": 15.0,
"1786": 15.0,
"1797": 14.000000000000002,
"1808": 14.000000000000002,
"1820": 14.000000000000002,
"1831": 14.000000000000002,
"1842": 14.000000000000002,
"1853": 14.000000000000002,
"1865": 14.000000000000002,
"1876": 14.000000000000002,
"1887": 14.000000000000002,
"1898": 14.000000000000002,
"1910": 14.000000000000002,
"1921": 14.000000000000002,
"1932": 14.000000000000002,
"1943": 14.000000000000002,
"1954": 14.000000000000002,
"1966": 13.0,
"1977": 13.0,
"1988": 13.0,
"1999": 13.0,
"2011": 13.0,
"2022": 13.0,
"2033": 13.0,
"2044": 13.0,
"2056": 13.0,
"2067": 13.0,
"2078": 13.0,
"2089": 13.0,
"2100": 13.0,
"2112": 13.0,
"2123": 13.0,
"2134": 13.0,
"2145": 13.0,
"2157": 13.0,
"2168": 13.0,
"2179": 13.0,
"2190": 13.0,
"2202": 13.0,
"2213": 12.0,
"2224": 12.0,
"2235": 12.0,
"2246": 12.0,
"2258": 12.0,
"2269": 12.0,
"2280": 12.0,
"2291": 12.0,
"2303": 12.0,
"2314": 12.0,
"2325": 12.0,
"2336": 12.0,
"2348": 12.0,
"2359": 12.0,
"2370": 12.0,
"2381": 12.0,
"2393": 12.0,
"2404": 12.0,
"2415": 12.0,
"2426": 12.0,
"2437": 11.0,
"2449": 11.0,
"2460": 11.0,
"2471": 11.0,
"2482": 11.0,
"2494": 11.0,
"2505": 11.0,
"2516": 11.0,
"2527": 11.0,
"2539": 11.0,
"2550": 11.0,
"2561": 11.0,
"2572": 11.0,
"2583": 11.0,
"2595": 11.0,
"2606": 11.0,
"2617": 11.0,
"2628": 11.0,
"2640": 11.0,
"2651": 11.0,
"2662": 11.0,
"2673": 11.0,
"2685": 11.0,
"2696": 10.0,
"2707": 10.0,
"2718": 10.0,
"2729": 10.0,
"2741": 10.0,
"2752": 10.0,
"2763": 10.0,
"2774": 10.0,
"2786": 10.0,
"2797": 10.0,
"2808": 10.0,
"2819": 10.0,
"2831": 10.0,
"2842": 10.0,
"2853": 10.0,
"2864": 10.0,
"2876": 10.0,
"2887": 10.0,
"2898": 10.0,
"2909": 10.0,
"2920": 10.0,
"2932": 10.0,
"2943": 10.0,
"2954": 10.0,
"2965": 10.0,
"2977": 9.0,
"2988": 9.0,
"2999": 9.0,
"3010": 9.0,
"3022": 9.0,
"3033": 9.0,
"3044": 9.0,
"3055": 9.0,
"3066": 9.0,
"3078": 9.0,
"3089": 9.0,
"3100": 9.0,
"3111": 9.0,
"3123": 9.0,
"3134": 9.0,
"3145": 9.0,
"3156": 9.0,
"3168": 9.0,
"3179": 9.0,
"3190": 9.0,
"3201": 9.0,
"3212": 9.0,
"3224": 9.0,
"3235": 9.0,
"3246": 9.0,
"3257": 9.0,
"3269": 9.0,
"3280": 9.0,
"3291": 9.0,
"3302": 8.0,
"3314": 8.0,
"3325": 8.0,
"3336": 8.0,
"3347": 8.0,
"3359": 8.0,
"3370": 8.0,
"3381": 8.0,
"3392": 8.0,
"3403": 8.0,
"3415": 8.0,
"3426": 8.0,
"3437": 8.0,
"3448": 8.0,
"3460": 8.0,
"3471": 8.0,
"3482": 8.0,
"3493": 8.0,
"3505": 8.0,
"3516": 8.0,
"3527": 8.0,
"3538": 8.0,
"3549": 8.0,
"3561": 8.0,
"3572": 8.0,
"3583": 8.0,
"3594": 8.0,
"3606": 8.0,
"3617": 8.0,
"3628": 8.0,
"3639": 8.0,
"3651": 8.0,
"3662": 7.000000000000001,
"3673": 7.000000000000001,
"3684": 7.000000000000001,
"3695": 7.000000000000001,
"3707": 7.000000000000001,
"3718": 7.000000000000001,
"3729": 7.000000000000001,
"3740": 7.000000000000001,
"3752": 7.000000000000001,
"3763": 7.000000000000001,
"3774": 7.000000000000001,
"3785": 7.000000000000001,
"3797": 7.000000000000001,
"3808": 7.000000000000001,
"3819": 7.000000000000001,
"3830": 7.000000000000001,
"3842": 7.000000000000001,
"3853": 7.000000000000001,
"3864": 7.000000000000001,
"3875": 7.000000000000001,
"3886": 7.000000000000001,
"3898": 7.000000000000001,
"3909": 7.000000000000001,
"3920": 6.0,
"3931": 6.0,
"3943": 6.0,
"3954": 6.0,
"3965": 6.0,
"3976": 6.0,
"3988": 6.0,
"3999": 6.0,
"4010": 6.0,
"4021": 6.0,
"4032": 6.0,
"4044": 6.0,
"4055": 6.0,
"4066": 6.0,
"4077": 6.0,
"4089": 6.0,
"4100": 6.0,
"4111": 6.0,
"4122": 6.0,
"4134": 6.0,
"4145": 6.0,
"4156": 6.0,
"4167": 6.0,
"4178": 6.0,
"4190": 6.0,
"4201": 6.0,
"4212": 5.0,
"4223": 5.0,
"4235": 5.0,
"4246": 5.0,
"4257": 5.0,
"4268": 5.0,
"4280": 5.0,
"4291": 5.0,
"4302": 5.0,
"4313": 5.0,
"4324": 5.0,
"4336": 5.0,
"4347": 5.0,
"4358": 5.0,
"4369": 5.0,
"4381": 5.0,
"4392": 5.0,
"4403": 5.0,
"4414": 5.0,
"4426": 5.0,
"4437": 5.0,
"4448": 5.0,
"4459": 5.0,
"4471": 5.0,
"4482": 5.0,
"4493": 5.0,
"4504": 5.0,
"4515": 5.0,
"4527": 4.0,
"4538": 4.0,
"4549": 4.0,
"4560": 4.0,
"4572": 4.0,
"4583": 4.0,
"4594": 4.0,
"4605": 4.0,
"4617": 4.0,
"4628": 4.0,
"4639": 4.0,
"4650": 4.0,
"4661": 4.0,
"4673": 4.0,
"4684": 4.0,
"4695": 4.0,
"4706": 4.0,
"4718": 4.0,
"4729": 4.0,
"4740": 4.0,
"4751": 4.0,
"4763": 4.0,
"4774": 3.0,
"4785": 3.0,
"4796": 3.0,
"4807": 3.0,
"4819": 3.0,
"4830": 3.0,
"4841": 3.0,
"4852": 3.0,
"4864": 3.0,
"4875": 3.0,
"4886": 3.0,
"4897": 3.0,
"4909": 3.0,
"4920": 3.0,
"4931": 3.0,
"4942": 3.0,
"4954": 3.0,
"4965": 3.0,
"4976": 3.0,
"4987": 3.0,
"4998": 3.0,
"5010": 3.0,
"5021": 2.0,
"5032": 2.0,
"5043": 2.0,
"5055": 2.0,
"5066": 2.0,
"5077": 2.0,
"5088": 2.0,
"5100": 2.0,
"5111": 2.0,
"5122": 2.0,
"5133": 2.0,
"5144": 2.0,
"5156": 2.0,
"5167": 2.0,
"5178": 2.0,
"5189": 2.0,
"5201": 2.0,
"5212": 2.0,
"5223": 2.0,
"5234": 2.0,
"5246": 2.0,
"5257": 2.0,
"5268": 1.0,
"5279": 1.0,
"5290": 1.0,
"5302": 1.0,
"5313": 1.0,
"5324": 1.0,
"5335": 1.0,
"5347": 1.0,
"5358": 1.0,
"5369": 1.0,
"5380": 1.0,
"5392": 1.0,
"5403": 1.0,
"5414": 1.0,
"5425": 1.0,
"5437": 1.0,
"5448": 1.0,
"5459": 1.0,
"5470": 1.0,
"5481": 1.0,
"5493": 1.0,
"5504": 1.0,
"5515": 1.0,
"5526": 1.0,
"5538": 1.0,
"5549": 1.0,
"5560": 1.0,
"5571": 1.0,
"5583": 1.0,
"5594": 1.0,
"5605": 1.0
}
},
"mosdepth_perchrom": {
"HCC1395_BL": {
"chr21": 231.24000000000012
},
"HCC1395_tumor": {
"chr21": 442.71000000000043
},
"Sig_18_Blood": {
"chr21": 330.810000000001
},
"Sig_18_tissue": {
"chr21": 1217.770000000001
}
},
"multiqc_general_stats": {
"HCC1395_BL": {
"samtools_flagstat_stats-error_rate": 0.356765,
"samtools_flagstat_stats-non_primary_alignments": 0.0,
"samtools_flagstat_stats-reads_mapped": 1.322751,
"samtools_flagstat_stats-reads_mapped_percent": 99.99954640194684,
"samtools_flagstat_stats-reads_properly_paired_percent": 99.96991132914057,
"samtools_flagstat_stats-reads_MQ0_percent": 7.908179658092908,
"samtools_flagstat_stats-raw_total_sequences": 1.322757,
"samtools_flagstat_stats-insert_size_average": 283.6,
"mosdepth-1_x_pc": 100.0,
"mosdepth-5_x_pc": 100.0,
"mosdepth-10_x_pc": 100.0,
"mosdepth-30_x_pc": 100.0,
"mosdepth-50_x_pc": 99.0,
"mosdepth-median_coverage": 149
},
"HCC1395_tumor": {
"samtools_flagstat_stats-error_rate": 0.362003,
"samtools_flagstat_stats-non_primary_alignments": 0.0,
"samtools_flagstat_stats-reads_mapped": 3.617921,
"samtools_flagstat_stats-reads_mapped_percent": 99.99977887902168,
"samtools_flagstat_stats-reads_properly_paired_percent": 99.9660302897044,
"samtools_flagstat_stats-reads_MQ0_percent": 7.73320869480855,
"samtools_flagstat_stats-raw_total_sequences": 3.6179289999999997,
"samtools_flagstat_stats-insert_size_average": 273.5,
"mosdepth-1_x_pc": 100.0,
"mosdepth-5_x_pc": 100.0,
"mosdepth-10_x_pc": 100.0,
"mosdepth-30_x_pc": 100.0,
"mosdepth-50_x_pc": 100.0,
"mosdepth-median_coverage": 334
},
"Sig_18_Blood": {
"samtools_flagstat_stats-error_rate": 0.3767457,
"samtools_flagstat_stats-non_primary_alignments": 0.0,
"samtools_flagstat_stats-reads_mapped": 1.685328,
"samtools_flagstat_stats-reads_mapped_percent": 99.99976265804008,
"samtools_flagstat_stats-reads_properly_paired_percent": 99.97911390752682,
"samtools_flagstat_stats-reads_MQ0_percent": 7.44470525688707,
"samtools_flagstat_stats-raw_total_sequences": 1.6853319999999998,
"samtools_flagstat_stats-insert_size_average": 291.0,
"mosdepth-1_x_pc": 100.0,
"mosdepth-5_x_pc": 100.0,
"mosdepth-10_x_pc": 100.0,
"mosdepth-30_x_pc": 100.0,
"mosdepth-50_x_pc": 99.0,
"mosdepth-median_coverage": 195
},
"Sig_18_tissue": {
"samtools_flagstat_stats-error_rate": 0.3583898,
"samtools_flagstat_stats-non_primary_alignments": 0.0,
"samtools_flagstat_stats-reads_mapped": 9.108433,
"samtools_flagstat_stats-reads_mapped_percent": 99.99962672093999,
"samtools_flagstat_stats-reads_properly_paired_percent": 99.95612873165155,
"samtools_flagstat_stats-reads_MQ0_percent": 6.856982629458942,
"samtools_flagstat_stats-raw_total_sequences": 9.108467,
"samtools_flagstat_stats-insert_size_average": 230.1,
"mosdepth-1_x_pc": 100.0,
"mosdepth-5_x_pc": 100.0,
"mosdepth-10_x_pc": 100.0,
"mosdepth-30_x_pc": 100.0,
"mosdepth-50_x_pc": 100.0,
"mosdepth-median_coverage": 839
}
}
}
}