Sample raw_total_sequences filtered_sequences sequences is_sorted 1st_fragments last_fragments reads_mapped reads_mapped_and_paired reads_unmapped reads_properly_paired reads_paired reads_duplicated reads_MQ0 reads_QC_failed non-primary_alignments supplementary_alignments total_length total_first_fragment_length total_last_fragment_length bases_mapped bases_mapped_(cigar) bases_trimmed bases_duplicated mismatches error_rate average_length average_first_fragment_length average_last_fragment_length maximum_length maximum_first_fragment_length maximum_last_fragment_length average_quality insert_size_average insert_size_standard_deviation inward_oriented_pairs outward_oriented_pairs pairs_with_other_orientation pairs_on_different_chromosomes percentage_of_properly_paired_reads_(%) reads_mapped_percent reads_mapped_and_paired_percent reads_unmapped_percent reads_properly_paired_percent reads_paired_percent reads_duplicated_percent reads_MQ0_percent reads_QC_failed_percent reads_mapped_MQ1
HCC1395_BL 1322757.0 0.0 1322757.0 1.0 659062.0 663695.0 1322751.0 1322741.0 6.0 1322359.0 1322757.0 290924.0 104606.0 0.0 0.0 172.0 198413550.0 98859300.0 99554250.0 198412650.0 189673024.0 0.0 43638600.0 676687.0 0.00356765 150.0 150.0 150.0 150.0 150.0 150.0 35.9 283.6 139.7 586702.0 74267.0 165.0 0.0 100.0 99.99954640194684 99.99879040519158 0.00045359805315715586 99.96991132914057 100.0 21.993760002782068 7.908179658092908 0.0 1218145.0
HCC1395_tumor 3617929.0 0.0 3617929.0 1.0 1806639.0 1811290.0 3617921.0 3617902.0 8.0 3616700.0 3617929.0 1525894.0 279782.0 0.0 0.0 757.0 542689350.0 270995850.0 271693500.0 542688150.0 516961994.0 0.0 228884100.0 1871418.0 0.00362003 150.0 150.0 150.0 150.0 150.0 150.0 36.0 273.5 134.8 1593119.0 215049.0 511.0 3.0 100.0 99.99977887902168 99.99925371669815 0.00022112097832765651 99.9660302897044 100.0 42.17589676303764 7.73320869480855 0.0 3338139.0
Sig_18_Blood 1685332.0 0.0 1685332.0 1.0 841709.0 843623.0 1685328.0 1685315.0 4.0 1684980.0 1685332.0 258756.0 125468.0 0.0 0.0 155.0 252799800.0 126256350.0 126543450.0 252799200.0 242866722.0 0.0 38813400.0 914990.0 0.003767457 150.0 150.0 150.0 150.0 150.0 150.0 36.1 291.0 142.5 756292.0 85991.0 150.0 2.0 100.0 99.99976265804008 99.99899129667033 0.00023734195992243664 99.97911390752682 100.0 15.353414045422504 7.44470525688707 0.0 1559860.0
Sig_18_tissue 9108467.0 0.0 9108467.0 1.0 4548023.0 4560444.0 9108433.0 9108388.0 34.0 9104471.0 9108467.0 3112907.0 624566.0 0.0 0.0 1482.0 1366270050.0 682203450.0 684066600.0 1366264950.0 1280357724.0 0.0 466936050.0 4588671.0 0.003583898 150.0 150.0 150.0 150.0 150.0 150.0 35.1 230.1 108.4 3826866.0 726239.0 752.0 12.0 100.0 99.99962672093999 99.99913267512525 0.0003732790600218456 99.95612873165155 100.0 34.175970555747746 6.856982629458942 0.0 8483867.0