[W::hts_idx_load3] The index file is older than the data file: 1029_16G-T1-TDNA-1_B23KFCWLT4_1.recalibrated.bam.bai
ls: *.per-base.d4: No such file or directory
ls: *.quantized.bed.gz: No such file or directory
ls: *.quantized.bed.gz.csi: No such file or directory
ls: *.thresholds.bed.gz: No such file or directory
ls: *.thresholds.bed.gz.csi: No such file or directory