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Filename
1029_0W2-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
Full Path
s3://ai-pipelines-experiment/chnobles/nf_sarek_somacnv_functional_v3/results/variant_calling/somatic_cnv/normalized/1029_0W2/1029_0W2-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
Size
636 bytes
Workflow Run
sarek-somacnv-functional-v3
Published
Jun 04, 2026 9:43 AM

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{
  "sample_id": "1029_0W2-N1-BDNA-1_B23KGCJLT4_1",
  "specimen_id": "1029_0W2",
  "flowcell": "unknown",
  "sample_type": "normal",
  "r2": 0.9416106660112947,
  "partial_range_gc_probe": 1.1244534661137284,
  "partial_range_median_insert_size": 3.0280632476089266,
  "partial_range_qcd": 2.581641276851697,
  "partial_range_probe_coverage_median": 7.268881103513205,
  "partial_range_dup_rate": 4.047740557453103,
  "partial_var_gc_probe": 0.1751666915287098,
  "partial_var_median_insert_size": 0.003326335363468504,
  "partial_var_qcd": 0.026919245227515806,
  "partial_var_probe_coverage_median": 0.6104978369976822,
  "partial_var_dup_rate": 0.1840898908826236
}