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Filename
1029_0I-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
Full Path
s3://ai-pipelines-experiment/chnobles/nf_sarek_somacnv_functional_v3/results/variant_calling/somatic_cnv/normalized/1029_0I/1029_0I-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
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634 bytes
Workflow Run
sarek-somacnv-functional-v3
Published
Jun 04, 2026 9:43 AM

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{
  "sample_id": "1029_0I-N1-BDNA-1_B23KGCJLT4_1",
  "specimen_id": "1029_0I",
  "flowcell": "unknown",
  "sample_type": "normal",
  "r2": 0.9600836588135881,
  "partial_range_gc_probe": 1.163372224581675,
  "partial_range_median_insert_size": 1.9398013279461237,
  "partial_range_qcd": 1.030563614808585,
  "partial_range_probe_coverage_median": 7.040217374486261,
  "partial_range_dup_rate": 4.307108879256943,
  "partial_var_gc_probe": 0.19134343810436663,
  "partial_var_median_insert_size": 0.00691266757113582,
  "partial_var_qcd": 0.011699685582584052,
  "partial_var_probe_coverage_median": 0.5623282243457137,
  "partial_var_dup_rate": 0.22771598439619986
}