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Filename
1029_0W2-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
Full Path
s3://ai-pipelines-experiment/chnobles/nf_sarek_somacnv_functional_v5/results/variant_calling/somatic_cnv/normalized/1029_0W2/1029_0W2-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
Size
639 bytes
Workflow Run
sarek-somacnv-functional-v5
Published
Jun 04, 2026 10:02 AM

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{
  "sample_id": "1029_0W2-N1-BDNA-1_B23KGCJLT4_1",
  "specimen_id": "1029_0W2",
  "flowcell": "unknown",
  "sample_type": "normal",
  "r2": 0.9416106660112948,
  "partial_range_gc_probe": 1.1244534661137262,
  "partial_range_median_insert_size": 3.0280632476089027,
  "partial_range_qcd": 2.5816412768517143,
  "partial_range_probe_coverage_median": 7.268881103513245,
  "partial_range_dup_rate": 4.047740557453107,
  "partial_var_gc_probe": 0.17516669152870937,
  "partial_var_median_insert_size": 0.0033263353634684807,
  "partial_var_qcd": 0.02691924522751569,
  "partial_var_probe_coverage_median": 0.6104978369976829,
  "partial_var_dup_rate": 0.18408989088262356
}