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Filename
1029_16G-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
Full Path
s3://ai-pipelines-experiment/chnobles/nf_sarek_somacnv_functional_v5/results/variant_calling/somatic_cnv/normalized/1029_16G/1029_16G-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
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636 bytes
Workflow Run
sarek-somacnv-functional-v5
Published
Jun 04, 2026 10:03 AM

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{
  "sample_id": "1029_16G-N1-BDNA-1_B23KGCJLT4_1",
  "specimen_id": "1029_16G",
  "flowcell": "unknown",
  "sample_type": "normal",
  "r2": 0.9659242349984204,
  "partial_range_gc_probe": 1.1600546848674922,
  "partial_range_median_insert_size": 4.456296244780183,
  "partial_range_qcd": 2.7041823456557212,
  "partial_range_probe_coverage_median": 6.826341542383229,
  "partial_range_dup_rate": 5.111719924460286,
  "partial_var_gc_probe": 0.1902153419219606,
  "partial_var_median_insert_size": 0.004530362805630315,
  "partial_var_qcd": 0.011828286602644076,
  "partial_var_probe_coverage_median": 0.5388556067438943,
  "partial_var_dup_rate": 0.2545704019258707
}