File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/585b319a8d7133ffd3bd64ee311897/.command.log
Size
893 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (1029_0W2-N1-BDNA-1_B23KGCJLT4_1)
Attempt

Content

View in new tab 
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/585b319a8d7133ffd3bd64ee311897/.command.sh
  Downloading: s3://ai-pipelines-experiment/chnobles/test_clean/results/norm_reference/sex_calls.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/585b319a8d7133ffd3bd64ee311897/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/b611149abfbdd5d677cb193d0ada5c/1029_0W2-N1-BDNA-1_B23KGCJLT4_1_probes.tsv.gz
  Downloading: s3://ai-pipelines-experiment/chnobles/test_clean/results/norm_reference/batch_reference.parquet
==> STAGING COMPLETE (5 inputs)

Loaded 472,386 probes for 1029_0W2-N1-BDNA-1_B23KGCJLT4_1
  Sex homology mask: 1494 probes set to mask=2
  5-feature GAM: R²=0.9416
  Wrote 1029_0W2-N1-BDNA-1_B23KGCJLT4_1_normalized.parquet
  Wrote feature stats to 1029_0W2-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
  Done in 17.8s