.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (1029_0I)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/b14de2aed4de52361cf0008b3bf0e3/.command.log
Size: 669 bytes
Task: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (1029_0I)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/b14de2aed4de52361cf0008b3bf0e3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/b14de2aed4de52361cf0008b3bf0e3/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/7bf9e156705837a4d4c3f140b4ace3/1029_0I.tnseq.filtered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/7bf9e156705837a4d4c3f140b4ace3/1029_0I.tnseq.filtered.vcf.gz
==> STAGING COMPLETE (4 inputs)

ls: *.vcf: No such file or directory
ls: *.bcf: No such file or directory
ls: *.bcf.gz: No such file or directory
ls: *.csi: No such file or directory