.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (1029_0I-T1-TDNA-1_A23KCGYLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/05e8a2f9a6dd783c63a2a9e5adc874/.command.log
Size: 807 bytes
Task: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (1029_0I-T1-TDNA-1_A23KCGYLT4_1)
Attempt

Content

  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00519_0069_A23KCGYLT4__d7a6b981--20260320-093016/alignments/recalibrated/1029_0I-T1-TDNA-1_A23KCGYLT4_1/1029_0I-T1-TDNA-1_A23KCGYLT4_1.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/05e8a2f9a6dd783c63a2a9e5adc874/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/05e8a2f9a6dd783c63a2a9e5adc874/.command.run
  Downloading: s3://ai-pipelines-experiment/chnobles/ref_data/dbsnp138.snps.hg38.tsv.gz
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260318_LH00519_0069_A23KCGYLT4__d7a6b981--20260320-093016/alignments/recalibrated/1029_0I-T1-TDNA-1_A23KCGYLT4_1/1029_0I-T1-TDNA-1_A23KCGYLT4_1.recalibrated.bam