File Info
- Filename
- samplesheet_input.csv
- Full Path
- s3://natera-platform-sandbox/platform-infra/stories/PLTFINF-169-semiproductionize/cgp_atx_exp0001/tools_daq_bams__8a99ba01--20260203-171151/samplesheets/samplesheet_input.csv
- Size
- 47.0 KB
- Workflow Run
- sarek-tools-daq-8a99ba01
- Published
- Feb 03, 2026 5:15 PM
Content
View in new tab| patient,status,sample,bam,bai |
| 1029_032,0,1029_032-N1-BDNA-1_2375WFLT3_s01,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_032-N1-BDNA-1_2375WFLT3_s01/1029_032-N1-BDNA-1_2375WFLT3_s01.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_032-N1-BDNA-1_2375WFLT3_s01/1029_032-N1-BDNA-1_2375WFLT3_s01.recalibrated.bam.bai |
| 1029_05O,0,1029_05O-N1-BDNA-1_2375WFLT3_s02,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_05O-N1-BDNA-1_2375WFLT3_s02/1029_05O-N1-BDNA-1_2375WFLT3_s02.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_05O-N1-BDNA-1_2375WFLT3_s02/1029_05O-N1-BDNA-1_2375WFLT3_s02.recalibrated.bam.bai |
| 1029_0DT,0,1029_0DT-N1-BDNA-1_2375WFLT3_s03,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_0DT-N1-BDNA-1_2375WFLT3_s03/1029_0DT-N1-BDNA-1_2375WFLT3_s03.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_0DT-N1-BDNA-1_2375WFLT3_s03/1029_0DT-N1-BDNA-1_2375WFLT3_s03.recalibrated.bam.bai |
| 1029_0NX,0,1029_0NX-N1-BDNA-1_2375WFLT3_s04,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_0NX-N1-BDNA-1_2375WFLT3_s04/1029_0NX-N1-BDNA-1_2375WFLT3_s04.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_0NX-N1-BDNA-1_2375WFLT3_s04/1029_0NX-N1-BDNA-1_2375WFLT3_s04.recalibrated.bam.bai |
| 1029_1G0,0,1029_1G0-N1-BDNA-1_2375WFLT3_s05,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_1G0-N1-BDNA-1_2375WFLT3_s05/1029_1G0-N1-BDNA-1_2375WFLT3_s05.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_1G0-N1-BDNA-1_2375WFLT3_s05/1029_1G0-N1-BDNA-1_2375WFLT3_s05.recalibrated.bam.bai |
| 1029_1H5,0,1029_1H5-N1-BDNA-1_2375WFLT3_s06,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_1H5-N1-BDNA-1_2375WFLT3_s06/1029_1H5-N1-BDNA-1_2375WFLT3_s06.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_1H5-N1-BDNA-1_2375WFLT3_s06/1029_1H5-N1-BDNA-1_2375WFLT3_s06.recalibrated.bam.bai |
| 1029_2IN,0,1029_2IN-N1-BDNA-1_2375WFLT3_s07,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_2IN-N1-BDNA-1_2375WFLT3_s07/1029_2IN-N1-BDNA-1_2375WFLT3_s07.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_2IN-N1-BDNA-1_2375WFLT3_s07/1029_2IN-N1-BDNA-1_2375WFLT3_s07.recalibrated.bam.bai |
| 1029_2LI,0,1029_2LI-N1-BDNA-1_2375WFLT3_s08,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_2LI-N1-BDNA-1_2375WFLT3_s08/1029_2LI-N1-BDNA-1_2375WFLT3_s08.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_2LI-N1-BDNA-1_2375WFLT3_s08/1029_2LI-N1-BDNA-1_2375WFLT3_s08.recalibrated.bam.bai |
| 1029_3N0,0,1029_3N0-N1-BDNA-1_2375WFLT3_s09,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_3N0-N1-BDNA-1_2375WFLT3_s09/1029_3N0-N1-BDNA-1_2375WFLT3_s09.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_3N0-N1-BDNA-1_2375WFLT3_s09/1029_3N0-N1-BDNA-1_2375WFLT3_s09.recalibrated.bam.bai |
| 1029_3OH,0,1029_3OH-N1-BDNA-1_2375WFLT3_s10,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_3OH-N1-BDNA-1_2375WFLT3_s10/1029_3OH-N1-BDNA-1_2375WFLT3_s10.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_3OH-N1-BDNA-1_2375WFLT3_s10/1029_3OH-N1-BDNA-1_2375WFLT3_s10.recalibrated.bam.bai |
| 1029_4J3,0,1029_4J3-N1-BDNA-1_2375WFLT3_s11,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_4J3-N1-BDNA-1_2375WFLT3_s11/1029_4J3-N1-BDNA-1_2375WFLT3_s11.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_4J3-N1-BDNA-1_2375WFLT3_s11/1029_4J3-N1-BDNA-1_2375WFLT3_s11.recalibrated.bam.bai |
| 1029_4Z2,0,1029_4Z2-N1-BDNA-1_2375WFLT3_s12,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_4Z2-N1-BDNA-1_2375WFLT3_s12/1029_4Z2-N1-BDNA-1_2375WFLT3_s12.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_4Z2-N1-BDNA-1_2375WFLT3_s12/1029_4Z2-N1-BDNA-1_2375WFLT3_s12.recalibrated.bam.bai |
| 1029_56D,0,1029_56D-N1-BDNA-1_2375WFLT3_s13,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_56D-N1-BDNA-1_2375WFLT3_s13/1029_56D-N1-BDNA-1_2375WFLT3_s13.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_56D-N1-BDNA-1_2375WFLT3_s13/1029_56D-N1-BDNA-1_2375WFLT3_s13.recalibrated.bam.bai |
| 1029_5IX,0,1029_5IX-N1-BDNA-1_2375WFLT3_s14,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_5IX-N1-BDNA-1_2375WFLT3_s14/1029_5IX-N1-BDNA-1_2375WFLT3_s14.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_5IX-N1-BDNA-1_2375WFLT3_s14/1029_5IX-N1-BDNA-1_2375WFLT3_s14.recalibrated.bam.bai |
| 1029_5O3,0,1029_5O3-N1-BDNA-1_2375WFLT3_s15,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_5O3-N1-BDNA-1_2375WFLT3_s15/1029_5O3-N1-BDNA-1_2375WFLT3_s15.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_5O3-N1-BDNA-1_2375WFLT3_s15/1029_5O3-N1-BDNA-1_2375WFLT3_s15.recalibrated.bam.bai |
| 1029_7Y1,0,1029_7Y1-N1-BDNA-1_2375WFLT3_s16,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_7Y1-N1-BDNA-1_2375WFLT3_s16/1029_7Y1-N1-BDNA-1_2375WFLT3_s16.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_7Y1-N1-BDNA-1_2375WFLT3_s16/1029_7Y1-N1-BDNA-1_2375WFLT3_s16.recalibrated.bam.bai |
| 1029_8AV,0,1029_8AV-N1-BDNA-1_2375WFLT3_s17,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_8AV-N1-BDNA-1_2375WFLT3_s17/1029_8AV-N1-BDNA-1_2375WFLT3_s17.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_8AV-N1-BDNA-1_2375WFLT3_s17/1029_8AV-N1-BDNA-1_2375WFLT3_s17.recalibrated.bam.bai |
| 1029_8BO,0,1029_8BO-N1-BDNA-1_2375WFLT3_s18,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_8BO-N1-BDNA-1_2375WFLT3_s18/1029_8BO-N1-BDNA-1_2375WFLT3_s18.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_8BO-N1-BDNA-1_2375WFLT3_s18/1029_8BO-N1-BDNA-1_2375WFLT3_s18.recalibrated.bam.bai |
| 1029_8OI,0,1029_8OI-N1-BDNA-1_2375WFLT3_s19,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_8OI-N1-BDNA-1_2375WFLT3_s19/1029_8OI-N1-BDNA-1_2375WFLT3_s19.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_8OI-N1-BDNA-1_2375WFLT3_s19/1029_8OI-N1-BDNA-1_2375WFLT3_s19.recalibrated.bam.bai |
| 1029_BA0,0,1029_BA0-N2-BDNA-1_2375WFLT3_s20,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BA0-N2-BDNA-1_2375WFLT3_s20/1029_BA0-N2-BDNA-1_2375WFLT3_s20.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BA0-N2-BDNA-1_2375WFLT3_s20/1029_BA0-N2-BDNA-1_2375WFLT3_s20.recalibrated.bam.bai |
| 1029_BBCQ,0,1029_BBCQ-N1-BDNA-1_2375WFLT3_s21,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BBCQ-N1-BDNA-1_2375WFLT3_s21/1029_BBCQ-N1-BDNA-1_2375WFLT3_s21.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BBCQ-N1-BDNA-1_2375WFLT3_s21/1029_BBCQ-N1-BDNA-1_2375WFLT3_s21.recalibrated.bam.bai |
| 1029_BBOC,0,1029_BBOC-N1-BDNA-1_2375WFLT3_s22,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BBOC-N1-BDNA-1_2375WFLT3_s22/1029_BBOC-N1-BDNA-1_2375WFLT3_s22.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BBOC-N1-BDNA-1_2375WFLT3_s22/1029_BBOC-N1-BDNA-1_2375WFLT3_s22.recalibrated.bam.bai |
| 1029_BBS1,0,1029_BBS1-N1-BDNA-1_2375WFLT3_s23,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-N1-BDNA-1_2375WFLT3_s23.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-N1-BDNA-1_2375WFLT3_s23.recalibrated.bam.bai |
| 1029_BCB6,0,1029_BCB6-N1-BDNA-1_2375WFLT3_s24,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BCB6-N1-BDNA-1_2375WFLT3_s24/1029_BCB6-N1-BDNA-1_2375WFLT3_s24.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BCB6-N1-BDNA-1_2375WFLT3_s24/1029_BCB6-N1-BDNA-1_2375WFLT3_s24.recalibrated.bam.bai |
| 1029_BCTO,0,1029_BCTO-N1-BDNA-1_2375WFLT3_s25,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BCTO-N1-BDNA-1_2375WFLT3_s25/1029_BCTO-N1-BDNA-1_2375WFLT3_s25.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BCTO-N1-BDNA-1_2375WFLT3_s25/1029_BCTO-N1-BDNA-1_2375WFLT3_s25.recalibrated.bam.bai |
| 1029_BDOZ,0,1029_BDOZ-N1-BDNA-1_2375WFLT3_s26,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BDOZ-N1-BDNA-1_2375WFLT3_s26/1029_BDOZ-N1-BDNA-1_2375WFLT3_s26.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BDOZ-N1-BDNA-1_2375WFLT3_s26/1029_BDOZ-N1-BDNA-1_2375WFLT3_s26.recalibrated.bam.bai |
| 1029_BF2U,0,1029_BF2U-N1-BDNA-1_2375WFLT3_s27,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BF2U-N1-BDNA-1_2375WFLT3_s27/1029_BF2U-N1-BDNA-1_2375WFLT3_s27.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BF2U-N1-BDNA-1_2375WFLT3_s27/1029_BF2U-N1-BDNA-1_2375WFLT3_s27.recalibrated.bam.bai |
| 1029_BFKM,0,1029_BFKM-N1-BDNA-1_2375WFLT3_s28,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BFKM-N1-BDNA-1_2375WFLT3_s28/1029_BFKM-N1-BDNA-1_2375WFLT3_s28.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BFKM-N1-BDNA-1_2375WFLT3_s28/1029_BFKM-N1-BDNA-1_2375WFLT3_s28.recalibrated.bam.bai |
| 1029_BG5,0,1029_BG5-N1-BDNA-1_2375WFLT3_s29,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BG5-N1-BDNA-1_2375WFLT3_s29/1029_BG5-N1-BDNA-1_2375WFLT3_s29.recalibrated.bam.bai |
| 1029_BGFD,0,1029_BGFD-N1-BDNA-1_2375WFLT3_s30,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BGFD-N1-BDNA-1_2375WFLT3_s30/1029_BGFD-N1-BDNA-1_2375WFLT3_s30.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BGFD-N1-BDNA-1_2375WFLT3_s30/1029_BGFD-N1-BDNA-1_2375WFLT3_s30.recalibrated.bam.bai |
| 1029_BGMF,0,1029_BGMF-N1-BDNA-1_2375WFLT3_s31,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BGMF-N1-BDNA-1_2375WFLT3_s31/1029_BGMF-N1-BDNA-1_2375WFLT3_s31.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BGMF-N1-BDNA-1_2375WFLT3_s31/1029_BGMF-N1-BDNA-1_2375WFLT3_s31.recalibrated.bam.bai |
| 1029_BICA,0,1029_BICA-N1-BDNA-1_2375WFLT3_s32,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BICA-N1-BDNA-1_2375WFLT3_s32/1029_BICA-N1-BDNA-1_2375WFLT3_s32.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BICA-N1-BDNA-1_2375WFLT3_s32/1029_BICA-N1-BDNA-1_2375WFLT3_s32.recalibrated.bam.bai |
| 1029_BIHC,0,1029_BIHC-N1-BDNA-1_2375WFLT3_s33,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BIHC-N1-BDNA-1_2375WFLT3_s33/1029_BIHC-N1-BDNA-1_2375WFLT3_s33.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BIHC-N1-BDNA-1_2375WFLT3_s33/1029_BIHC-N1-BDNA-1_2375WFLT3_s33.recalibrated.bam.bai |
| 1029_BIHO,0,1029_BIHO-N1-BDNA-1_2375WFLT3_s34,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-N1-BDNA-1_2375WFLT3_s34.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-N1-BDNA-1_2375WFLT3_s34.recalibrated.bam.bai |
| 1029_BJH0,0,1029_BJH0-N1-BDNA-1_2375WFLT3_s35,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BJH0-N1-BDNA-1_2375WFLT3_s35/1029_BJH0-N1-BDNA-1_2375WFLT3_s35.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BJH0-N1-BDNA-1_2375WFLT3_s35/1029_BJH0-N1-BDNA-1_2375WFLT3_s35.recalibrated.bam.bai |
| 1029_BK2H,0,1029_BK2H-N1-BDNA-1_2375WFLT3_s36,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BK2H-N1-BDNA-1_2375WFLT3_s36/1029_BK2H-N1-BDNA-1_2375WFLT3_s36.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BK2H-N1-BDNA-1_2375WFLT3_s36/1029_BK2H-N1-BDNA-1_2375WFLT3_s36.recalibrated.bam.bai |
| 1029_BLH5,0,1029_BLH5-N1-BDNA-1_2375WFLT3_s37,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BLH5-N1-BDNA-1_2375WFLT3_s37/1029_BLH5-N1-BDNA-1_2375WFLT3_s37.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BLH5-N1-BDNA-1_2375WFLT3_s37/1029_BLH5-N1-BDNA-1_2375WFLT3_s37.recalibrated.bam.bai |
| 1029_BLU1,0,1029_BLU1-N1-BDNA-1_2375WFLT3_s38,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BLU1-N1-BDNA-1_2375WFLT3_s38/1029_BLU1-N1-BDNA-1_2375WFLT3_s38.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BLU1-N1-BDNA-1_2375WFLT3_s38/1029_BLU1-N1-BDNA-1_2375WFLT3_s38.recalibrated.bam.bai |
| 1029_BN9Y,0,1029_BN9Y-N1-BDNA-1_2375WFLT3_s39,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BN9Y-N1-BDNA-1_2375WFLT3_s39/1029_BN9Y-N1-BDNA-1_2375WFLT3_s39.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BN9Y-N1-BDNA-1_2375WFLT3_s39/1029_BN9Y-N1-BDNA-1_2375WFLT3_s39.recalibrated.bam.bai |
| 1029_BNG8,0,1029_BNG8-N1-BDNA-1_2375WFLT3_s40,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BNG8-N1-BDNA-1_2375WFLT3_s40/1029_BNG8-N1-BDNA-1_2375WFLT3_s40.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BNG8-N1-BDNA-1_2375WFLT3_s40/1029_BNG8-N1-BDNA-1_2375WFLT3_s40.recalibrated.bam.bai |
| 1029_BO4Y,0,1029_BO4Y-N1-BDNA-1_2375WFLT3_s41,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BO4Y-N1-BDNA-1_2375WFLT3_s41/1029_BO4Y-N1-BDNA-1_2375WFLT3_s41.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BO4Y-N1-BDNA-1_2375WFLT3_s41/1029_BO4Y-N1-BDNA-1_2375WFLT3_s41.recalibrated.bam.bai |
| 1029_BOHJ,0,1029_BOHJ-N1-BDNA-1_2375WFLT3_s42,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BOHJ-N1-BDNA-1_2375WFLT3_s42/1029_BOHJ-N1-BDNA-1_2375WFLT3_s42.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BOHJ-N1-BDNA-1_2375WFLT3_s42/1029_BOHJ-N1-BDNA-1_2375WFLT3_s42.recalibrated.bam.bai |
| 1029_BOSD,0,1029_BOSD-N1-BDNA-1_2375WFLT3_s43,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BOSD-N1-BDNA-1_2375WFLT3_s43/1029_BOSD-N1-BDNA-1_2375WFLT3_s43.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BOSD-N1-BDNA-1_2375WFLT3_s43/1029_BOSD-N1-BDNA-1_2375WFLT3_s43.recalibrated.bam.bai |
| 1029_BP21,0,1029_BP21-N1-BDNA-1_2375WFLT3_s44,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BP21-N1-BDNA-1_2375WFLT3_s44/1029_BP21-N1-BDNA-1_2375WFLT3_s44.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0042_A2375WFLT3__fffe895a--20260202-170000/alignments/recalibrated/1029_BP21-N1-BDNA-1_2375WFLT3_s44/1029_BP21-N1-BDNA-1_2375WFLT3_s44.recalibrated.bam.bai |
| 1029_032,1,1029_032-T1-TDNA-1_23FC2GLT4_s01,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_032-T1-TDNA-1_23FC2GLT4_s01/1029_032-T1-TDNA-1_23FC2GLT4_s01.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_032-T1-TDNA-1_23FC2GLT4_s01/1029_032-T1-TDNA-1_23FC2GLT4_s01.recalibrated.bam.bai |
| 1029_05O,1,1029_05O-T1-TDNA-1_23FC2GLT4_s02,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_05O-T1-TDNA-1_23FC2GLT4_s02/1029_05O-T1-TDNA-1_23FC2GLT4_s02.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_05O-T1-TDNA-1_23FC2GLT4_s02/1029_05O-T1-TDNA-1_23FC2GLT4_s02.recalibrated.bam.bai |
| 1029_0DT,1,1029_0DT-T1-TDNA-1_23FC2GLT4_s03,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_0DT-T1-TDNA-1_23FC2GLT4_s03/1029_0DT-T1-TDNA-1_23FC2GLT4_s03.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_0DT-T1-TDNA-1_23FC2GLT4_s03/1029_0DT-T1-TDNA-1_23FC2GLT4_s03.recalibrated.bam.bai |
| 1029_0NX,1,1029_0NX-T1-TDNA-1_23FC2GLT4_s04,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_0NX-T1-TDNA-1_23FC2GLT4_s04/1029_0NX-T1-TDNA-1_23FC2GLT4_s04.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_0NX-T1-TDNA-1_23FC2GLT4_s04/1029_0NX-T1-TDNA-1_23FC2GLT4_s04.recalibrated.bam.bai |
| 1029_1G0,1,1029_1G0-T1-TDNA-1_23FC2GLT4_s05,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_1G0-T1-TDNA-1_23FC2GLT4_s05/1029_1G0-T1-TDNA-1_23FC2GLT4_s05.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_1G0-T1-TDNA-1_23FC2GLT4_s05/1029_1G0-T1-TDNA-1_23FC2GLT4_s05.recalibrated.bam.bai |
| 1029_1H5,1,1029_1H5-T1-TDNA-1_23FC2GLT4_s06,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_1H5-T1-TDNA-1_23FC2GLT4_s06/1029_1H5-T1-TDNA-1_23FC2GLT4_s06.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_1H5-T1-TDNA-1_23FC2GLT4_s06/1029_1H5-T1-TDNA-1_23FC2GLT4_s06.recalibrated.bam.bai |
| 1029_2IN,1,1029_2IN-T1-TDNA-1_23FC2GLT4_s07,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_2IN-T1-TDNA-1_23FC2GLT4_s07/1029_2IN-T1-TDNA-1_23FC2GLT4_s07.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_2IN-T1-TDNA-1_23FC2GLT4_s07/1029_2IN-T1-TDNA-1_23FC2GLT4_s07.recalibrated.bam.bai |
| 1029_2LI,1,1029_2LI-T1-TDNA-1_23FC2GLT4_s08,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_2LI-T1-TDNA-1_23FC2GLT4_s08/1029_2LI-T1-TDNA-1_23FC2GLT4_s08.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_2LI-T1-TDNA-1_23FC2GLT4_s08/1029_2LI-T1-TDNA-1_23FC2GLT4_s08.recalibrated.bam.bai |
| 1029_3N0,1,1029_3N0-T1-TDNA-1_23FC2GLT4_s09,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_3N0-T1-TDNA-1_23FC2GLT4_s09/1029_3N0-T1-TDNA-1_23FC2GLT4_s09.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_3N0-T1-TDNA-1_23FC2GLT4_s09/1029_3N0-T1-TDNA-1_23FC2GLT4_s09.recalibrated.bam.bai |
| 1029_3OH,1,1029_3OH-T1-TDNA-1_23FC2GLT4_s10,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_3OH-T1-TDNA-1_23FC2GLT4_s10/1029_3OH-T1-TDNA-1_23FC2GLT4_s10.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_3OH-T1-TDNA-1_23FC2GLT4_s10/1029_3OH-T1-TDNA-1_23FC2GLT4_s10.recalibrated.bam.bai |
| 1029_4J3,1,1029_4J3-T1-TDNA-1_23FC2GLT4_s11,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_4J3-T1-TDNA-1_23FC2GLT4_s11/1029_4J3-T1-TDNA-1_23FC2GLT4_s11.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_4J3-T1-TDNA-1_23FC2GLT4_s11/1029_4J3-T1-TDNA-1_23FC2GLT4_s11.recalibrated.bam.bai |
| 1029_4Z2,1,1029_4Z2-T1-TDNA-1_23FC2GLT4_s12,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_4Z2-T1-TDNA-1_23FC2GLT4_s12/1029_4Z2-T1-TDNA-1_23FC2GLT4_s12.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_4Z2-T1-TDNA-1_23FC2GLT4_s12/1029_4Z2-T1-TDNA-1_23FC2GLT4_s12.recalibrated.bam.bai |
| 1029_56D,1,1029_56D-T1-TDNA-1_23FC2GLT4_s13,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_56D-T1-TDNA-1_23FC2GLT4_s13/1029_56D-T1-TDNA-1_23FC2GLT4_s13.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_56D-T1-TDNA-1_23FC2GLT4_s13/1029_56D-T1-TDNA-1_23FC2GLT4_s13.recalibrated.bam.bai |
| 1029_5IX,1,1029_5IX-T1-TDNA-1_23FC2GLT4_s14,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_5IX-T1-TDNA-1_23FC2GLT4_s14/1029_5IX-T1-TDNA-1_23FC2GLT4_s14.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_5IX-T1-TDNA-1_23FC2GLT4_s14/1029_5IX-T1-TDNA-1_23FC2GLT4_s14.recalibrated.bam.bai |
| 1029_5O3,1,1029_5O3-T1-TDNA-1_23FC2GLT4_s15,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_5O3-T1-TDNA-1_23FC2GLT4_s15/1029_5O3-T1-TDNA-1_23FC2GLT4_s15.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_5O3-T1-TDNA-1_23FC2GLT4_s15/1029_5O3-T1-TDNA-1_23FC2GLT4_s15.recalibrated.bam.bai |
| 1029_7Y1,1,1029_7Y1-T1-TDNA-1_23FC2GLT4_s16,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_7Y1-T1-TDNA-1_23FC2GLT4_s16/1029_7Y1-T1-TDNA-1_23FC2GLT4_s16.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_7Y1-T1-TDNA-1_23FC2GLT4_s16/1029_7Y1-T1-TDNA-1_23FC2GLT4_s16.recalibrated.bam.bai |
| 1029_8AV,1,1029_8AV-T1-TDNA-1_23FC2GLT4_s17,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_8AV-T1-TDNA-1_23FC2GLT4_s17/1029_8AV-T1-TDNA-1_23FC2GLT4_s17.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_8AV-T1-TDNA-1_23FC2GLT4_s17/1029_8AV-T1-TDNA-1_23FC2GLT4_s17.recalibrated.bam.bai |
| 1029_8BO,1,1029_8BO-T1-TDNA-1_23FC2GLT4_s18,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_8BO-T1-TDNA-1_23FC2GLT4_s18/1029_8BO-T1-TDNA-1_23FC2GLT4_s18.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_8BO-T1-TDNA-1_23FC2GLT4_s18/1029_8BO-T1-TDNA-1_23FC2GLT4_s18.recalibrated.bam.bai |
| 1029_8OI,1,1029_8OI-T1-TDNA-1_23FC2GLT4_s19,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_8OI-T1-TDNA-1_23FC2GLT4_s19/1029_8OI-T1-TDNA-1_23FC2GLT4_s19.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_8OI-T1-TDNA-1_23FC2GLT4_s19/1029_8OI-T1-TDNA-1_23FC2GLT4_s19.recalibrated.bam.bai |
| 1029_BA0,1,1029_BA0-T1-TDNA-1_23FC2GLT4_s20,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BA0-T1-TDNA-1_23FC2GLT4_s20/1029_BA0-T1-TDNA-1_23FC2GLT4_s20.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BA0-T1-TDNA-1_23FC2GLT4_s20/1029_BA0-T1-TDNA-1_23FC2GLT4_s20.recalibrated.bam.bai |
| 1029_BBCQ,1,1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21/1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21.recalibrated.bam.bai |
| 1029_BBOC,1,1029_BBOC-T1-TDNA-1_23FC2GLT4_s22,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BBOC-T1-TDNA-1_23FC2GLT4_s22/1029_BBOC-T1-TDNA-1_23FC2GLT4_s22.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BBOC-T1-TDNA-1_23FC2GLT4_s22/1029_BBOC-T1-TDNA-1_23FC2GLT4_s22.recalibrated.bam.bai |
| 1029_BBS1,1,1029_BBS1-T1-TDNA-1_23FC2GLT4_s23,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23.recalibrated.bam.bai |
| 1029_BCB6,1,1029_BCB6-T1-TDNA-1_23FC2GLT4_s24,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BCB6-T1-TDNA-1_23FC2GLT4_s24/1029_BCB6-T1-TDNA-1_23FC2GLT4_s24.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BCB6-T1-TDNA-1_23FC2GLT4_s24/1029_BCB6-T1-TDNA-1_23FC2GLT4_s24.recalibrated.bam.bai |
| 1029_BCTO,1,1029_BCTO-T1-TDNA-1_23FC2GLT4_s25,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BCTO-T1-TDNA-1_23FC2GLT4_s25/1029_BCTO-T1-TDNA-1_23FC2GLT4_s25.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BCTO-T1-TDNA-1_23FC2GLT4_s25/1029_BCTO-T1-TDNA-1_23FC2GLT4_s25.recalibrated.bam.bai |
| 1029_BDOZ,1,1029_BDOZ-T1-TDNA-1_23FC2GLT4_s26,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BDOZ-T1-TDNA-1_23FC2GLT4_s26/1029_BDOZ-T1-TDNA-1_23FC2GLT4_s26.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BDOZ-T1-TDNA-1_23FC2GLT4_s26/1029_BDOZ-T1-TDNA-1_23FC2GLT4_s26.recalibrated.bam.bai |
| 1029_BF2U,1,1029_BF2U-T1-TDNA-1_23FC2GLT4_s27,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BF2U-T1-TDNA-1_23FC2GLT4_s27/1029_BF2U-T1-TDNA-1_23FC2GLT4_s27.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BF2U-T1-TDNA-1_23FC2GLT4_s27/1029_BF2U-T1-TDNA-1_23FC2GLT4_s27.recalibrated.bam.bai |
| 1029_BFKM,1,1029_BFKM-T1-TDNA-1_23FC2GLT4_s28,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28.recalibrated.bam.bai |
| 1029_BG5,1,1029_BG5-T1-TDNA-1_23FC2GLT4_s29,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BG5-T1-TDNA-1_23FC2GLT4_s29/1029_BG5-T1-TDNA-1_23FC2GLT4_s29.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BG5-T1-TDNA-1_23FC2GLT4_s29/1029_BG5-T1-TDNA-1_23FC2GLT4_s29.recalibrated.bam.bai |
| 1029_BGFD,1,1029_BGFD-T1-TDNA-1_23FC2GLT4_s30,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BGFD-T1-TDNA-1_23FC2GLT4_s30/1029_BGFD-T1-TDNA-1_23FC2GLT4_s30.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BGFD-T1-TDNA-1_23FC2GLT4_s30/1029_BGFD-T1-TDNA-1_23FC2GLT4_s30.recalibrated.bam.bai |
| 1029_BGMF,1,1029_BGMF-T1-TDNA-1_23FC2GLT4_s31,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BGMF-T1-TDNA-1_23FC2GLT4_s31/1029_BGMF-T1-TDNA-1_23FC2GLT4_s31.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BGMF-T1-TDNA-1_23FC2GLT4_s31/1029_BGMF-T1-TDNA-1_23FC2GLT4_s31.recalibrated.bam.bai |
| 1029_BICA,1,1029_BICA-T1-TDNA-1_23FC2GLT4_s33,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BICA-T1-TDNA-1_23FC2GLT4_s33/1029_BICA-T1-TDNA-1_23FC2GLT4_s33.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BICA-T1-TDNA-1_23FC2GLT4_s33/1029_BICA-T1-TDNA-1_23FC2GLT4_s33.recalibrated.bam.bai |
| 1029_BIHC,1,1029_BIHC-T1-TDNA-1_23FC2GLT4_s34,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BIHC-T1-TDNA-1_23FC2GLT4_s34/1029_BIHC-T1-TDNA-1_23FC2GLT4_s34.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BIHC-T1-TDNA-1_23FC2GLT4_s34/1029_BIHC-T1-TDNA-1_23FC2GLT4_s34.recalibrated.bam.bai |
| 1029_BIHO,1,1029_BIHO-T1-TDNA-1_23FC2GLT4_s35,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35.recalibrated.bam.bai |
| 1029_BJH0,1,1029_BJH0-T1-TDNA-1_23FC2GLT4_s36,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BJH0-T1-TDNA-1_23FC2GLT4_s36/1029_BJH0-T1-TDNA-1_23FC2GLT4_s36.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BJH0-T1-TDNA-1_23FC2GLT4_s36/1029_BJH0-T1-TDNA-1_23FC2GLT4_s36.recalibrated.bam.bai |
| 1029_BK2H,1,1029_BK2H-T1-TDNA-1_23FC2GLT4_s37,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BK2H-T1-TDNA-1_23FC2GLT4_s37/1029_BK2H-T1-TDNA-1_23FC2GLT4_s37.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BK2H-T1-TDNA-1_23FC2GLT4_s37/1029_BK2H-T1-TDNA-1_23FC2GLT4_s37.recalibrated.bam.bai |
| 1029_BLH5,1,1029_BLH5-T1-TDNA-1_23FC2GLT4_s38,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BLH5-T1-TDNA-1_23FC2GLT4_s38/1029_BLH5-T1-TDNA-1_23FC2GLT4_s38.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BLH5-T1-TDNA-1_23FC2GLT4_s38/1029_BLH5-T1-TDNA-1_23FC2GLT4_s38.recalibrated.bam.bai |
| 1029_BLU1,1,1029_BLU1-T1-TDNA-1_23FC2GLT4_s39,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BLU1-T1-TDNA-1_23FC2GLT4_s39/1029_BLU1-T1-TDNA-1_23FC2GLT4_s39.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BLU1-T1-TDNA-1_23FC2GLT4_s39/1029_BLU1-T1-TDNA-1_23FC2GLT4_s39.recalibrated.bam.bai |
| 1029_BN9Y,1,1029_BN9Y-T1-TDNA-1_23FC2GLT4_s40,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BN9Y-T1-TDNA-1_23FC2GLT4_s40/1029_BN9Y-T1-TDNA-1_23FC2GLT4_s40.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BN9Y-T1-TDNA-1_23FC2GLT4_s40/1029_BN9Y-T1-TDNA-1_23FC2GLT4_s40.recalibrated.bam.bai |
| 1029_BNG8,1,1029_BNG8-T1-TDNA-1_23FC2GLT4_s41,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BNG8-T1-TDNA-1_23FC2GLT4_s41/1029_BNG8-T1-TDNA-1_23FC2GLT4_s41.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BNG8-T1-TDNA-1_23FC2GLT4_s41/1029_BNG8-T1-TDNA-1_23FC2GLT4_s41.recalibrated.bam.bai |
| 1029_BO4Y,1,1029_BO4Y-T1-TDNA-1_23FC2GLT4_s42,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BO4Y-T1-TDNA-1_23FC2GLT4_s42/1029_BO4Y-T1-TDNA-1_23FC2GLT4_s42.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BO4Y-T1-TDNA-1_23FC2GLT4_s42/1029_BO4Y-T1-TDNA-1_23FC2GLT4_s42.recalibrated.bam.bai |
| 1029_BOHJ,1,1029_BOHJ-T1-TDNA-1_23FC2GLT4_s43,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BOHJ-T1-TDNA-1_23FC2GLT4_s43/1029_BOHJ-T1-TDNA-1_23FC2GLT4_s43.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BOHJ-T1-TDNA-1_23FC2GLT4_s43/1029_BOHJ-T1-TDNA-1_23FC2GLT4_s43.recalibrated.bam.bai |
| 1029_BOSD,1,1029_BOSD-T1-TDNA-1_23FC2GLT4_s44,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BOSD-T1-TDNA-1_23FC2GLT4_s44/1029_BOSD-T1-TDNA-1_23FC2GLT4_s44.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BOSD-T1-TDNA-1_23FC2GLT4_s44/1029_BOSD-T1-TDNA-1_23FC2GLT4_s44.recalibrated.bam.bai |
| 1029_BP21,1,1029_BP21-T1-TDNA-1_23FC2GLT4_s45,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BP21-T1-TDNA-1_23FC2GLT4_s45/1029_BP21-T1-TDNA-1_23FC2GLT4_s45.recalibrated.bam,s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_atx_exp0001/20251222_LH00527_0043_B23FC2GLT4__fffe895a--20260202-170000/alignments/recalibrated/1029_BP21-T1-TDNA-1_23FC2GLT4_s45/1029_BP21-T1-TDNA-1_23FC2GLT4_s45.recalibrated.bam.bai |
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