Prefix: s3://natera-platform-sandbox/platform-infra/stories/PLTFINF-169-semiproductionize/cgp_atx_exp0001/tools_daq_bams__8a99ba01--20260203-171151
| Path | ||
|---|---|---|
| /multiqc/multiqc_plots | Feb 04, 2026 2:05 AM | |
| /multiqc/multiqc_data | Feb 04, 2026 2:05 AM | |
| /multiqc/multiqc_report.html | Feb 04, 2026 2:05 AM | |
| /annotation/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased_custom.ann_snpEff_VEP.ann.vcf.gz.tbi | Feb 04, 2026 1:57 AM | |
| /annotation/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased_custom.ann_snpEff_VEP.ann.vcf.gz | Feb 04, 2026 1:56 AM | |
| /reports/EnsemblVEP/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased_custom.ann_snpEff_VEP.ann.summary.html | Feb 04, 2026 1:56 AM | |
| /annotation/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased_custom.ann_snpEff.ann.vcf.gz | Feb 04, 2026 1:54 AM | |
| /reports/variant_qc.json | Feb 04, 2026 1:54 AM | |
| /annotation/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased_custom.ann_snpEff.ann.vcf.gz.tbi | Feb 04, 2026 1:54 AM | |
| /reports/raw_qc/snpeff/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased_custom.ann_snpEff.genes.txt | Feb 04, 2026 1:53 AM | |
| /reports/raw_qc/snpeff/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased_custom.ann_snpEff.csv | Feb 04, 2026 1:53 AM | |
| /reports/raw_qc/vcftools/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased.TsTv.qual | Feb 04, 2026 1:49 AM | |
| /reports/raw_qc/vcftools/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased.FILTER.summary | Feb 04, 2026 1:49 AM | |
| /reports/raw_qc/vcftools/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased.TsTv.count | Feb 04, 2026 1:49 AM | |
| /reports/raw_qc/bcftools/mutect2/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased.bcftools_stats.txt | Feb 04, 2026 1:49 AM | |
| /variant_calling/whatshap/1029_BIHO-T1-TDNA-1_23FC2GLT4_s35_vs_1029_BIHO-N1-BDNA-1_2375WFLT3_s34.mutect2.whatshap.phased.vcf.gz | Feb 04, 2026 1:47 AM | |
| /annotation/mutect2/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28_vs_1029_BFKM-N1-BDNA-1_2375WFLT3_s28/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28_vs_1029_BFKM-N1-BDNA-1_2375WFLT3_s28.mutect2.whatshap.phased_custom.ann_snpEff_VEP.ann.vcf.gz.tbi | Feb 03, 2026 11:18 PM | |
| /annotation/mutect2/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28_vs_1029_BFKM-N1-BDNA-1_2375WFLT3_s28/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28_vs_1029_BFKM-N1-BDNA-1_2375WFLT3_s28.mutect2.whatshap.phased_custom.ann_snpEff_VEP.ann.vcf.gz | Feb 03, 2026 11:17 PM | |
| /reports/EnsemblVEP/mutect2/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28_vs_1029_BFKM-N1-BDNA-1_2375WFLT3_s28/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28_vs_1029_BFKM-N1-BDNA-1_2375WFLT3_s28.mutect2.whatshap.phased_custom.ann_snpEff_VEP.ann.summary.html | Feb 03, 2026 11:17 PM | |
| /annotation/mutect2/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28_vs_1029_BFKM-N1-BDNA-1_2375WFLT3_s28/1029_BFKM-T1-TDNA-1_23FC2GLT4_s28_vs_1029_BFKM-N1-BDNA-1_2375WFLT3_s28.mutect2.whatshap.phased_custom.ann_snpEff.ann.vcf.gz | Feb 03, 2026 11:15 PM |