NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_0DT-N1-BDNA-1_2375WFLT3_s03;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_0DT-N1-BDNA-1_2375WFLT3_s03;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 05e52423730b
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_0DT-N1-BDNA-1_2375WFLT3_s03;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: be/268c48
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/be/268c4837861e99cf5e1c6447e968e8
Native ID: nf-be268c4837861e99cf5e1c6447e968e8-29471

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 577.8 MB / 4.0 GB
Process I/O (rchar / wchar): 47.3 GB / 12.3 MB
Disk I/O (read / write): 46.8 GB / 1.2 MB
Host: i-06a1fde115f5137d9 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:27 PM
Completed: Feb 03, 2026 5:32:42 PM
Total Duration: 7m 14s

Phases

Queue: 39s
Execution: 4m 29s
Stage/Unstage: 2m 6s

Attempt 1

Execution

Status: failed
Hash: d6/fa05e3
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d6/fa05e3ca004ca8cd02bdd8eb2c7956
Native ID: nf-d6fa05e3ca004ca8cd02bdd8eb2c7956-2dfc4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-06188f855a88d76f8 ( spot)

Runtime

Submitted: Feb 03, 2026 5:12:59 PM
Completed: Feb 03, 2026 5:22:36 PM
Total Duration: -

Phases

Queue: 2m 51s
Execution: -
Stage/Unstage: -