NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BCB6-T1-TDNA-1_23FC2GLT4_s24;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BCB6-T1-TDNA-1_23FC2GLT4_s24;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 1ee0cff53c08
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BCB6-T1-TDNA-1_23FC2GLT4_s24;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: aa/0aafe9
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/0aafe9648a55a4bdfec749549e8eca
Native ID: nf-aa0aafe9648a55a4bdfec749549e8eca-b28e3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 578.3 MB / 4.0 GB
Process I/O (rchar / wchar): 181.1 GB / 12.9 MB
Disk I/O (read / write): 181.1 GB / 1.3 MB
Host: i-0aae3b70e7c205e23 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:52 PM
Completed: Feb 03, 2026 5:51:23 PM
Total Duration: 25m 30s

Phases

Queue: 1m 56s
Execution: 17m 9s
Stage/Unstage: 6m 25s

Attempt 1

Execution

Status: failed
Hash: 1c/0ed57f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/0ed57f0ae85d89afe7e879fff85412
Native ID: nf-1c0ed57f0ae85d89afe7e879fff85412-28f0f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0491d5e05792dcbaf ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:51 PM
Completed: Feb 03, 2026 5:23:14 PM
Total Duration: -

Phases

Queue: 1m 20s
Execution: -
Stage/Unstage: -