NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_0NX-N1-BDNA-1_2375WFLT3_s04;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_0NX-N1-BDNA-1_2375WFLT3_s04;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 1fd8dcc48eb7
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_0NX-N1-BDNA-1_2375WFLT3_s04;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 95/c742b5
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/c742b5da63893362d6de11a06cfd81
Native ID: nf-95c742b5da63893362d6de11a06cfd81-a4ece

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 577.5 MB / 4.0 GB
Process I/O (rchar / wchar): 49.5 GB / 12.3 MB
Disk I/O (read / write): 49.3 GB / 1.2 MB
Host: i-026da2f9ea02cced0 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:26 PM
Completed: Feb 03, 2026 5:33:23 PM
Total Duration: 7m 56s

Phases

Queue: 1m 15s
Execution: 4m 54s
Stage/Unstage: 1m 47s

Attempt 1

Execution

Status: failed
Hash: af/7cbe43
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/7cbe4350fcfa13a2558462b74b0303
Native ID: nf-af7cbe4350fcfa13a2558462b74b0303-6ea34

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-06188f855a88d76f8 ( spot)

Runtime

Submitted: Feb 03, 2026 5:12:57 PM
Completed: Feb 03, 2026 5:22:35 PM
Total Duration: -

Phases

Queue: 2m 51s
Execution: -
Stage/Unstage: -