NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_2IN-N1-BDNA-1_2375WFLT3_s07;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_2IN-N1-BDNA-1_2375WFLT3_s07;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 2d6f37e73ff6
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_2IN-N1-BDNA-1_2375WFLT3_s07;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: bb/799acb
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/799acb611ad0f9a8ac0f0397bf088a
Native ID: nf-bb799acb611ad0f9a8ac0f0397bf088a-68cdf

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 4
Memory (peak / alloc): 577.9 MB / 4.0 GB
Process I/O (rchar / wchar): 41.2 GB / 12.2 MB
Disk I/O (read / write): 41.2 GB / 1.2 MB
Host: i-06a0f2bb2ef701a02 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:29 PM
Completed: Feb 03, 2026 5:32:40 PM
Total Duration: 7m 10s

Phases

Queue: 1m 50s
Execution: 3m 55s
Stage/Unstage: 1m 25s

Attempt 1

Execution

Status: failed
Hash: f0/a8797c
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/a8797c597b9ce1f36f32969e5a9d9b
Native ID: nf-f0a8797c597b9ce1f36f32969e5a9d9b-251fb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-06188f855a88d76f8 ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:00 PM
Completed: Feb 03, 2026 5:22:25 PM
Total Duration: 9m 24s

Phases

Queue: 2m 22s
Execution: 7m 2s
Stage/Unstage: 0s