NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_7Y1-T1-TDNA-1_23FC2GLT4_s16;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_7Y1-T1-TDNA-1_23FC2GLT4_s16;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 2e11b781cf5a
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_7Y1-T1-TDNA-1_23FC2GLT4_s16;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 0b/3d287a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/3d287ad89e8a8f41d89a7df4888e53
Native ID: nf-0b3d287ad89e8a8f41d89a7df4888e53-b0187

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 578.3 MB / 4.0 GB
Process I/O (rchar / wchar): 139.7 GB / 12.7 MB
Disk I/O (read / write): 139.8 GB / 1.3 MB
Host: i-088d8336261c57983 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:28:15 PM
Completed: Feb 03, 2026 5:46:50 PM
Total Duration: 18m 34s

Phases

Queue: 15s
Execution: 13m 20s
Stage/Unstage: 4m 59s

Attempt 1

Execution

Status: failed
Hash: 5a/ac6a10
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/ac6a10d6a74e6cf8dca382218b0035
Native ID: nf-5aac6a10d6a74e6cf8dca382218b0035-ca2c2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-08627d48185b6df0c ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:47 PM
Completed: Feb 03, 2026 5:28:15 PM
Total Duration: -

Phases

Queue: 1m 22s
Execution: -
Stage/Unstage: -