NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BNG8-N1-BDNA-1_2375WFLT3_s40;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BNG8-N1-BDNA-1_2375WFLT3_s40;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 3396b18aa92c
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BNG8-N1-BDNA-1_2375WFLT3_s40;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 43/11c85d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/11c85d55b59ef2a21e8a48cddb531e
Native ID: nf-4311c85d55b59ef2a21e8a48cddb531e-244f3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 547.8 MB / 4.0 GB
Process I/O (rchar / wchar): 49.0 GB / 12.4 MB
Disk I/O (read / write): 48.8 GB / 1.2 MB
Host: i-0138e42c5f59d7a67 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:40 PM
Completed: Feb 03, 2026 5:33:02 PM
Total Duration: 7m 21s

Phases

Queue: 59s
Execution: 4m 43s
Stage/Unstage: 1m 39s

Attempt 1

Execution

Status: failed
Hash: 69/e05e44
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/e05e44a50dc2bc5f35fa6592a71fc6
Native ID: nf-69e05e44a50dc2bc5f35fa6592a71fc6-9a271

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0491d5e05792dcbaf ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:31 PM
Completed: Feb 03, 2026 5:22:25 PM
Total Duration: 8m 53s

Phases

Queue: 58s
Execution: 7m 55s
Stage/Unstage: 0s