NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BICA-T1-TDNA-1_23FC2GLT4_s33;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BICA-T1-TDNA-1_23FC2GLT4_s33;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 381695e255d2
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BICA-T1-TDNA-1_23FC2GLT4_s33;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 95/620cc9
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/620cc985d10b5aaa60788d23aa3322
Native ID: nf-95620cc985d10b5aaa60788d23aa3322-774a7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 578.3 MB / 4.0 GB
Process I/O (rchar / wchar): 232.8 GB / 14.1 MB
Disk I/O (read / write): 232.9 GB / 1.4 MB
Host: i-0756e94acc163a7a1 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:26:04 PM
Completed: Feb 03, 2026 5:58:00 PM
Total Duration: 31m 55s

Phases

Queue: 1m 24s
Execution: 22m 9s
Stage/Unstage: 8m 22s

Attempt 1

Execution

Status: failed
Hash: ff/8fb207
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/8fb2078995732260168ebfc800d791
Native ID: nf-ff8fb2078995732260168ebfc800d791-1f0bb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0698daf25f90b5a24 ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:55 PM
Completed: Feb 03, 2026 5:23:18 PM
Total Duration: -

Phases

Queue: 1m 18s
Execution: -
Stage/Unstage: -