NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BIHO-N1-BDNA-1_2375WFLT3_s34;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BIHO-N1-BDNA-1_2375WFLT3_s34;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 418fd003246e
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BIHO-N1-BDNA-1_2375WFLT3_s34;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 3c/8c4a6d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/8c4a6d0b0be42ff396fc325cbc45c4
Native ID: nf-3c8c4a6d0b0be42ff396fc325cbc45c4-7a65e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 577.8 MB / 4.0 GB
Process I/O (rchar / wchar): 56.3 GB / 12.4 MB
Disk I/O (read / write): 56.2 GB / 1.2 MB
Host: i-036b368e2a91a1cf9 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:28:08 PM
Completed: Feb 03, 2026 5:36:00 PM
Total Duration: 7m 51s

Phases

Queue: 13s
Execution: 5m 46s
Stage/Unstage: 1m 52s

Attempt 1

Execution

Status: failed
Hash: d3/042341
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/0423417a23780e1d0a4ed17ace7e83
Native ID: nf-d30423417a23780e1d0a4ed17ace7e83-b8d51

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0ee5ef313d1bd336c ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:23 PM
Completed: Feb 03, 2026 5:28:09 PM
Total Duration: -

Phases

Queue: 2m 34s
Execution: -
Stage/Unstage: -