NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_56D-T1-TDNA-1_23FC2GLT4_s13;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_56D-T1-TDNA-1_23FC2GLT4_s13;SNP_GRCh38_hg38_wChr)

Login

Task Info

Status: succeeded
Hash: 4a60099a8e7f
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_56D-T1-TDNA-1_23FC2GLT4_s13;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 5e/7dc7cf
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/7dc7cfeb2e956eeb340d55d43c1c0e
Native ID: nf-5e7dc7cfeb2e956eeb340d55d43c1c0e-90a22

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 569.0 MB / 4.0 GB
Process I/O (rchar / wchar): 216.8 GB / 13.4 MB
Disk I/O (read / write): 216.9 GB / 1.4 MB
Host: i-0707e6696b8f209bc ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:34:20 PM
Completed: Feb 03, 2026 6:02:25 PM
Total Duration: 28m 4s

Phases

Queue: 3s
Execution: 20m 6s
Stage/Unstage: 7m 55s

Attempt 1

Execution

Status: failed
Hash: e0/54092a
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/54092aa117d7c354b3060367c4783d
Native ID: nf-e054092aa117d7c354b3060367c4783d-75515

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0bfb6eee0753a6db8 ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:44 PM
Completed: Feb 03, 2026 5:30:31 PM
Total Duration: 16m 46s

Phases

Queue: 58s
Execution: 15m 48s
Stage/Unstage: 0s