NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BO4Y-N1-BDNA-1_2375WFLT3_s41;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BO4Y-N1-BDNA-1_2375WFLT3_s41;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 5fd8ab7efe44
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BO4Y-N1-BDNA-1_2375WFLT3_s41;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: a7/8909a1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/8909a123c4bd68d519704e63217cf2
Native ID: nf-a78909a123c4bd68d519704e63217cf2-70498

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 556.4 MB / 4.0 GB
Process I/O (rchar / wchar): 58.6 GB / 12.4 MB
Disk I/O (read / write): 58.4 GB / 1.2 MB
Host: i-02704def3c952d025 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:40 PM
Completed: Feb 03, 2026 5:35:24 PM
Total Duration: 9m 43s

Phases

Queue: 2m 7s
Execution: 5m 31s
Stage/Unstage: 2m 5s

Attempt 1

Execution

Status: failed
Hash: fc/4fdc68
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/4fdc680c5bfdef1d605686dc0558b7
Native ID: nf-fc4fdc680c5bfdef1d605686dc0558b7-29432

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0491d5e05792dcbaf ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:31 PM
Completed: Feb 03, 2026 5:22:25 PM
Total Duration: 8m 53s

Phases

Queue: 59s
Execution: 7m 54s
Stage/Unstage: 0s