NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_032-T1-TDNA-1_23FC2GLT4_s01;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_032-T1-TDNA-1_23FC2GLT4_s01;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 6847fd330072
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_032-T1-TDNA-1_23FC2GLT4_s01;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 14/f232b4
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/f232b497983a9de5f657214ae7586a
Native ID: nf-14f232b497983a9de5f657214ae7586a-7355b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 577.5 MB / 4.0 GB
Process I/O (rchar / wchar): 184.0 GB / 13.2 MB
Disk I/O (read / write): 183.9 GB / 1.3 MB
Host: i-00e509fd871bb6884 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:28:12 PM
Completed: Feb 03, 2026 5:52:23 PM
Total Duration: 24m 10s

Phases

Queue: 7s
Execution: 17m 33s
Stage/Unstage: 6m 30s

Attempt 1

Execution

Status: failed
Hash: c3/309373
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/3093734ccdd726ac60d755fdc143e7
Native ID: nf-c33093734ccdd726ac60d755fdc143e7-c0028

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-08627d48185b6df0c ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:35 PM
Completed: Feb 03, 2026 5:28:11 PM
Total Duration: -

Phases

Queue: 1m 29s
Execution: -
Stage/Unstage: -