NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_1H5-N1-BDNA-1_2375WFLT3_s06;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_1H5-N1-BDNA-1_2375WFLT3_s06;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 69f7bcc42d65
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_1H5-N1-BDNA-1_2375WFLT3_s06;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 43/226830
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/43/2268306aa99d05cd9404fe44fb4331
Native ID: nf-432268306aa99d05cd9404fe44fb4331-d160b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 578.2 MB / 4.0 GB
Process I/O (rchar / wchar): 52.7 GB / 12.2 MB
Disk I/O (read / write): 52.5 GB / 1.2 MB
Host: i-06a1fde115f5137d9 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:29 PM
Completed: Feb 03, 2026 5:33:20 PM
Total Duration: 7m 50s

Phases

Queue: 27s
Execution: 5m 6s
Stage/Unstage: 2m 17s

Attempt 1

Execution

Status: failed
Hash: 0a/6db39f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/6db39f7b3307f0d1308168ec1bf59a
Native ID: nf-0a6db39f7b3307f0d1308168ec1bf59a-48b32

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-06188f855a88d76f8 ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:01 PM
Completed: Feb 03, 2026 5:22:37 PM
Total Duration: -

Phases

Queue: 2m 50s
Execution: -
Stage/Unstage: -