NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BIHO-T1-TDNA-1_23FC2GLT4_s35;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BIHO-T1-TDNA-1_23FC2GLT4_s35;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 6a508cb0b906
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BIHO-T1-TDNA-1_23FC2GLT4_s35;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 12/a4b1ef
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/a4b1efa5b7b5fc7666116ccfbfa241
Native ID: nf-12a4b1efa5b7b5fc7666116ccfbfa241-eacbb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 577.7 MB / 4.0 GB
Process I/O (rchar / wchar): 224.0 GB / 13.6 MB
Disk I/O (read / write): 224.1 GB / 1.4 MB
Host: i-0d0da0c1fe1df73dd ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:26:05 PM
Completed: Feb 03, 2026 5:56:50 PM
Total Duration: 30m 44s

Phases

Queue: 33s
Execution: 21m 4s
Stage/Unstage: 9m 7s

Attempt 1

Execution

Status: failed
Hash: 5d/fc7d7e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/fc7d7eee748a6a8e0d960af34d6751
Native ID: nf-5dfc7d7eee748a6a8e0d960af34d6751-6b7d3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0698daf25f90b5a24 ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:56 PM
Completed: Feb 03, 2026 5:23:19 PM
Total Duration: -

Phases

Queue: 1m 18s
Execution: -
Stage/Unstage: -