NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BJH0-N1-BDNA-1_2375WFLT3_s35;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BJH0-N1-BDNA-1_2375WFLT3_s35;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 70ddee60e99a
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BJH0-N1-BDNA-1_2375WFLT3_s35;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: a6/8fc978
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/8fc9783a7a672dd6638e89a6d810cd
Native ID: nf-a68fc9783a7a672dd6638e89a6d810cd-2a3df

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 578.4 MB / 4.0 GB
Process I/O (rchar / wchar): 46.9 GB / 12.3 MB
Disk I/O (read / write): 46.7 GB / 1.2 MB
Host: i-0e93ea76f8407c643 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:31 PM
Completed: Feb 03, 2026 5:33:27 PM
Total Duration: 7m 55s

Phases

Queue: 1m 47s
Execution: 4m 35s
Stage/Unstage: 1m 33s

Attempt 1

Execution

Status: failed
Hash: 1a/494ecf
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/494ecf18167e3f963de08347fea0ac
Native ID: nf-1a494ecf18167e3f963de08347fea0ac-3ca9e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0698daf25f90b5a24 ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:25 PM
Completed: Feb 03, 2026 5:22:45 PM
Total Duration: -

Phases

Queue: 1m 34s
Execution: -
Stage/Unstage: -