NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BGMF-N1-BDNA-1_2375WFLT3_s31;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BGMF-N1-BDNA-1_2375WFLT3_s31;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 77292a15d539
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BGMF-N1-BDNA-1_2375WFLT3_s31;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: f0/2d42fe
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/2d42fecabdd6ef2f34c4e61c9a6bfe
Native ID: nf-f02d42fecabdd6ef2f34c4e61c9a6bfe-f03cd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 577.5 MB / 4.0 GB
Process I/O (rchar / wchar): 56.5 GB / 12.3 MB
Disk I/O (read / write): 56.5 GB / 1.2 MB
Host: i-0492bdb2f782b7ed5 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:28:07 PM
Completed: Feb 03, 2026 5:35:31 PM
Total Duration: 7m 23s

Phases

Queue: 6s
Execution: 5m 26s
Stage/Unstage: 1m 51s

Attempt 1

Execution

Status: failed
Hash: 76/954676
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/76/954676302ad771c79be6aa2f7a4a4f
Native ID: nf-76954676302ad771c79be6aa2f7a4a4f-9f3fe

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0ee5ef313d1bd336c ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:22 PM
Completed: Feb 03, 2026 5:28:08 PM
Total Duration: -

Phases

Queue: 2m 35s
Execution: -
Stage/Unstage: -