NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BLH5-T1-TDNA-1_23FC2GLT4_s38;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BLH5-T1-TDNA-1_23FC2GLT4_s38;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 7cf16a431e87
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BLH5-T1-TDNA-1_23FC2GLT4_s38;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 12/60ca37
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/60ca371039e8bd4e695af36715a7fd
Native ID: nf-1260ca371039e8bd4e695af36715a7fd-f3117

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 561.2 MB / 4.0 GB
Process I/O (rchar / wchar): 165.1 GB / 13.2 MB
Disk I/O (read / write): 164.9 GB / 1.3 MB
Host: i-0a043d603e4a79c0d ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:28:19 PM
Completed: Feb 03, 2026 5:49:59 PM
Total Duration: 21m 39s

Phases

Queue: 8s
Execution: 15m 37s
Stage/Unstage: 5m 54s

Attempt 1

Execution

Status: failed
Hash: d2/46b2a6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/46b2a66361ef401c0cbbd22e149eb1
Native ID: nf-d246b2a66361ef401c0cbbd22e149eb1-4e7fc

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0ee5ef313d1bd336c ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:58 PM
Completed: Feb 03, 2026 5:28:17 PM
Total Duration: -

Phases

Queue: 1m 16s
Execution: -
Stage/Unstage: -