NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BGMF-T1-TDNA-1_23FC2GLT4_s31;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BGMF-T1-TDNA-1_23FC2GLT4_s31;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 874669c71baf
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BGMF-T1-TDNA-1_23FC2GLT4_s31;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 28/36bc15
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/36bc150bf218a2e006a3716cc992e7
Native ID: nf-2836bc150bf218a2e006a3716cc992e7-96fc7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 577.6 MB / 4.0 GB
Process I/O (rchar / wchar): 183.1 GB / 13.2 MB
Disk I/O (read / write): 183.0 GB / 1.3 MB
Host: i-063280cbf043f536d ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:59 PM
Completed: Feb 03, 2026 5:51:13 PM
Total Duration: 25m 13s

Phases

Queue: 8s
Execution: 17m 32s
Stage/Unstage: 7m 33s

Attempt 1

Execution

Status: failed
Hash: a6/ff2d12
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/ff2d12b0b67a93b9c85bdd78a66b62
Native ID: nf-a6ff2d12b0b67a93b9c85bdd78a66b62-c7799

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0698daf25f90b5a24 ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:54 PM
Completed: Feb 03, 2026 5:23:17 PM
Total Duration: -

Phases

Queue: 1m 18s
Execution: -
Stage/Unstage: -