NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (1029_4Z2-T1-TDNA-1_23FC2GLT4_s12_vs_1029_4Z2-N1-BDNA-1_2375WFLT3_s12) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
MSISENSOR2_MSI (1029_4Z2-T1-TDNA-1_23FC2GLT4_s12_vs_1029_4Z2-N1-BDNA-1_2375WFLT3_s12)

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Task Info

Status: succeeded
Hash: b9e65387be65
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI
Tag: 1029_4Z2-T1-TDNA-1_23FC2GLT4_s12_vs_1029_4Z2-N1-BDNA-1_2375WFLT3_s12
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: f6/7205d7
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/msisensor2:0.1--hd03093a_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/7205d74b3c8715c7278c61d052393a
Native ID: nf-f67205d74b3c8715c7278c61d052393a-8125f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 64
Memory (peak / alloc): 4.8 GB / 128.0 GB
Process I/O (rchar / wchar): 91.2 GB / 2.2 MB
Disk I/O (read / write): 41.2 GB / 4.1 MB
Host: i-0707e6696b8f209bc ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:27:45 PM
Completed: Feb 03, 2026 6:23:43 PM
Total Duration: 55m 57s

Phases

Queue: 5m 15s
Execution: 38m 19s
Stage/Unstage: 12m 23s

Attempt 1

Execution

Status: failed
Hash: f2/cdddac
Exit Code: 137
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/msisensor2:0.1--hd03093a_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/cdddac4e6437828405cec7cd34c9c2
Native ID: nf-f2cdddac4e6437828405cec7cd34c9c2-8190d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 32
Memory (peak / alloc): - / 64.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-05b3181ae3e7f2094 ( spot)

Runtime

Submitted: Feb 03, 2026 5:19:31 PM
Completed: Feb 03, 2026 5:26:21 PM
Total Duration: 6m 49s

Phases

Queue: 2m 46s
Execution: 4m 2s
Stage/Unstage: 0s