NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BOHJ-N1-BDNA-1_2375WFLT3_s42;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BOHJ-N1-BDNA-1_2375WFLT3_s42;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: be0e2a512865
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BOHJ-N1-BDNA-1_2375WFLT3_s42;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: ae/1972a3
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/1972a34a453e47dbd415fdee21d22e
Native ID: nf-ae1972a34a453e47dbd415fdee21d22e-d0ff6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 569.1 MB / 4.0 GB
Process I/O (rchar / wchar): 46.8 GB / 12.3 MB
Disk I/O (read / write): 46.8 GB / 1.2 MB
Host: i-098476460947c4af2 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:41 PM
Completed: Feb 03, 2026 5:32:24 PM
Total Duration: 6m 42s

Phases

Queue: 38s
Execution: 4m 24s
Stage/Unstage: 1m 40s

Attempt 1

Execution

Status: failed
Hash: a2/dca011
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/dca011ff208e19f1bfd998888c7fd2
Native ID: nf-a2dca011ff208e19f1bfd998888c7fd2-685e8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0491d5e05792dcbaf ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:32 PM
Completed: Feb 03, 2026 5:22:25 PM
Total Duration: 8m 52s

Phases

Queue: 1m 0s
Execution: 7m 52s
Stage/Unstage: 0s