NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BF2U-T1-TDNA-1_23FC2GLT4_s27;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BF2U-T1-TDNA-1_23FC2GLT4_s27;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: c0ed334a62fb
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BF2U-T1-TDNA-1_23FC2GLT4_s27;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 6b/f746ac
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/f746ac2be8fcc9650b61725a8c4297
Native ID: nf-6bf746ac2be8fcc9650b61725a8c4297-514bd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 551.9 MB / 4.0 GB
Process I/O (rchar / wchar): 121.3 GB / 13.1 MB
Disk I/O (read / write): 121.1 GB / 1.3 MB
Host: i-0451efd366514907b ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:56 PM
Completed: Feb 03, 2026 5:43:32 PM
Total Duration: 17m 35s

Phases

Queue: 1m 19s
Execution: 11m 51s
Stage/Unstage: 4m 25s

Attempt 1

Execution

Status: failed
Hash: 1e/5433b1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/5433b1afc08561f8c20dc909175b84
Native ID: nf-1e5433b1afc08561f8c20dc909175b84-74521

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0491d5e05792dcbaf ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:52 PM
Completed: Feb 03, 2026 5:23:15 PM
Total Duration: -

Phases

Queue: 1m 19s
Execution: -
Stage/Unstage: -