NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (1029_2LI-T1-TDNA-1_23FC2GLT4_s08_vs_1029_2LI-N1-BDNA-1_2375WFLT3_s08) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
MSISENSOR2_MSI (1029_2LI-T1-TDNA-1_23FC2GLT4_s08_vs_1029_2LI-N1-BDNA-1_2375WFLT3_s08)

Login

Task Info

Status: succeeded
Hash: c2bed3cb28fa
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI
Tag: 1029_2LI-T1-TDNA-1_23FC2GLT4_s08_vs_1029_2LI-N1-BDNA-1_2375WFLT3_s08
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 5d/aca6f1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/msisensor2:0.1--hd03093a_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/aca6f1ed849131a60944a045bcfd2d
Native ID: nf-5daca6f1ed849131a60944a045bcfd2d-e2536

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 64
Memory (peak / alloc): 4.1 GB / 128.0 GB
Process I/O (rchar / wchar): 74.9 GB / 2.2 MB
Disk I/O (read / write): 35.2 GB / 3.9 MB
Host: i-0978390ddd2dfcee2 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:25 PM
Completed: Feb 03, 2026 6:01:46 PM
Total Duration: 36m 20s

Phases

Queue: 14s
Execution: 30m 41s
Stage/Unstage: 5m 25s

Attempt 1

Execution

Status: failed
Hash: 47/733dac
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/msisensor2:0.1--hd03093a_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/733dac73212bd295d27f4503f412d1
Native ID: nf-47733dac73212bd295d27f4503f412d1-6e895

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 32
Memory (peak / alloc): - / 64.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Feb 03, 2026 5:19:26 PM
Completed: Feb 03, 2026 5:22:17 PM
Total Duration: -

Phases

Queue: 3032h 17m
Execution: -
Stage/Unstage: -