NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_8AV-T1-TDNA-1_23FC2GLT4_s17;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_8AV-T1-TDNA-1_23FC2GLT4_s17;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: d0993768b599
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_8AV-T1-TDNA-1_23FC2GLT4_s17;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: b0/a41364
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/a4136413b236da2b3677d0eac33b7e
Native ID: nf-b0a4136413b236da2b3677d0eac33b7e-22ff4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 577.8 MB / 4.0 GB
Process I/O (rchar / wchar): 215.2 GB / 13.5 MB
Disk I/O (read / write): 215.1 GB / 1.4 MB
Host: i-037a5104dcbb1a111 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:28:15 PM
Completed: Feb 03, 2026 5:56:57 PM
Total Duration: 28m 41s

Phases

Queue: 3s
Execution: 20m 9s
Stage/Unstage: 8m 29s

Attempt 1

Execution

Status: failed
Hash: fe/174d72
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fe/174d72d4192cec466302ba6ec90677
Native ID: nf-fe174d72d4192cec466302ba6ec90677-ce419

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-08627d48185b6df0c ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:46 PM
Completed: Feb 03, 2026 5:28:15 PM
Total Duration: -

Phases

Queue: 1m 22s
Execution: -
Stage/Unstage: -