NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BK2H-T1-TDNA-1_23FC2GLT4_s37;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BK2H-T1-TDNA-1_23FC2GLT4_s37;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: da4eba255756
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BK2H-T1-TDNA-1_23FC2GLT4_s37;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: e7/0b3061
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e7/0b3061bcfc4ca7e3b6f271143ea587
Native ID: nf-e70b3061bcfc4ca7e3b6f271143ea587-15318

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 578.0 MB / 4.0 GB
Process I/O (rchar / wchar): 213.4 GB / 14.9 MB
Disk I/O (read / write): 213.3 GB / 1.5 MB
Host: i-0492bdb2f782b7ed5 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:28:19 PM
Completed: Feb 03, 2026 5:56:04 PM
Total Duration: 27m 44s

Phases

Queue: 6s
Execution: 20m 2s
Stage/Unstage: 7m 36s

Attempt 1

Execution

Status: failed
Hash: a4/9f9f33
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/9f9f33c61cf1c3038285a3bb99d5c8
Native ID: nf-a49f9f33c61cf1c3038285a3bb99d5c8-3a5f2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0ee5ef313d1bd336c ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:58 PM
Completed: Feb 03, 2026 5:28:17 PM
Total Duration: -

Phases

Queue: 1m 16s
Execution: -
Stage/Unstage: -