NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BDOZ-T1-TDNA-1_23FC2GLT4_s26;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BDOZ-T1-TDNA-1_23FC2GLT4_s26;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: ecfff85e22ef
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BDOZ-T1-TDNA-1_23FC2GLT4_s26;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 0f/2a5ccc
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/2a5cccca9b21573b0db07063fbc79d
Native ID: nf-0f2a5cccca9b21573b0db07063fbc79d-3be12

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 577.8 MB / 4.0 GB
Process I/O (rchar / wchar): 184.0 GB / 13.0 MB
Disk I/O (read / write): 184.1 GB / 1.3 MB
Host: i-01b8cfb3c35c9a8f9 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:54 PM
Completed: Feb 03, 2026 5:51:46 PM
Total Duration: 25m 51s

Phases

Queue: 1m 39s
Execution: 17m 35s
Stage/Unstage: 6m 37s

Attempt 1

Execution

Status: failed
Hash: 78/1dac81
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/1dac811564960f5d2fc02ca2100a46
Native ID: nf-781dac811564960f5d2fc02ca2100a46-4bfc9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0491d5e05792dcbaf ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:51 PM
Completed: Feb 03, 2026 5:23:14 PM
Total Duration: -

Phases

Queue: 1m 20s
Execution: -
Stage/Unstage: -