NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30;SNP_GRCh38_hg38_wChr) - sarek-tools-daq-8a99ba01 - Workflow Tracker

Runs
sarek-tools-daq-8a99ba01
Tasks
BCFTOOLS_MPILEUP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: ef3c08811dcd
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 40/9a9048
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/9a90486665a6a7aa5c97dc4f05e687
Native ID: nf-409a90486665a6a7aa5c97dc4f05e687-46123

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 578.1 MB / 4.0 GB
Process I/O (rchar / wchar): 187.6 GB / 13.0 MB
Disk I/O (read / write): 187.5 GB / 1.3 MB
Host: i-0d0da0c1fe1df73dd ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:25:58 PM
Completed: Feb 03, 2026 5:51:32 PM
Total Duration: 25m 33s

Phases

Queue: 40s
Execution: 17m 52s
Stage/Unstage: 7m 1s

Attempt 1

Execution

Status: failed
Hash: 16/c70bab
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/c70bab1839c71f474d6b504c91a0f9
Native ID: nf-16c70bab1839c71f474d6b504c91a0f9-da4c8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0698daf25f90b5a24 ( spot)

Runtime

Submitted: Feb 03, 2026 5:13:54 PM
Completed: Feb 03, 2026 5:23:16 PM
Total Duration: -

Phases

Queue: 1m 19s
Execution: -
Stage/Unstage: -